Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.7e-216 754.6 386 100.0
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 4.4e-108 395.6 271 72.7
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.3e-107 394.0 270 72.2
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 4.9e-107 392.1 271 72.3
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 4.1e-106 389.0 271 72.0
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 9.2e-106 387.9 271 70.5
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.3e-104 384.0 278 69.4
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 3.0e-104 382.9 275 68.7
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 5.0e-104 382.1 271 68.6
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 8.6e-104 381.3 271 69.7
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.5e-103 379.8 270 69.3
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.5e-103 379.8 270 69.3
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 3.3e-103 379.4 272 69.1
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 9.5e-103 377.9 270 68.1
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 1.6e-102 377.1 271 67.9
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.6e-102 377.1 271 68.3
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 3.6e-102 375.9 272 68.8
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 4.7e-102 375.6 271 67.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 4.7e-102 375.6 271 67.5
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 4.7e-102 375.6 272 68.4
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 4.7e-102 375.6 393 55.5
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 8.1e-102 374.8 271 66.8
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.8e-101 373.6 270 68.5
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.8e-101 373.6 271 67.2
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.8e-101 373.6 271 67.2
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.3e-101 373.2 272 67.6
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 2.3e-101 373.2 271 67.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 2.3e-101 373.2 271 67.2
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 3.1e-101 372.9 271 66.8
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 3.1e-101 372.9 272 68.0
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 3.1e-101 372.9 271 67.9
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 3.1e-101 372.9 271 66.8
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 4.0e-101 372.5 272 65.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 4.0e-101 372.5 272 67.6
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 5.2e-101 372.1 272 67.6
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 6.8e-101 371.7 264 68.6
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 8.9e-101 371.3 271 67.5
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.2e-100 370.9 272 67.3
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.5e-100 370.5 273 66.7
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.5e-100 370.5 271 66.4
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.0e-100 370.2 271 66.4
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.6e-100 369.8 271 66.1
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 3.4e-100 369.4 271 66.4
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.4e-100 369.0 272 66.9
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 4.4e-100 369.0 272 66.9
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 7.5e-100 368.2 270 67.8
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 9.9e-100 367.9 272 66.9
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.3e-99 367.5 364 54.9
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.3e-99 367.5 271 65.7
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.7e-99 367.1 272 66.9
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.7e-99 367.1 272 66.2
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.7e-99 367.1 273 67.8
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 2.9e-99 366.3 273 65.6
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 2.9e-99 366.3 272 66.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 6.4e-99 365.2 272 65.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 6.4e-99 365.2 273 65.9
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 1.1e-98 364.4 273 66.7
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.1e-98 364.4 273 66.7
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.1e-98 364.4 273 65.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.1e-98 364.4 271 64.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 1.9e-98 363.6 272 66.9
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.9e-98 363.6 271 64.9
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 2.4e-98 363.2 281 63.0
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.4e-98 363.2 273 65.6
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 3.2e-98 362.8 273 65.2
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 4.1e-98 362.5 281 62.6
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 4.1e-98 362.5 272 65.4
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 5.4e-98 362.1 272 65.4
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 7.1e-98 361.7 272 65.4
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 7.1e-98 361.7 272 65.4
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 9.2e-98 361.3 271 65.7
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 9.2e-98 361.3 267 66.3
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.1e-97 360.1 261 67.4
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 3.5e-97 359.4 272 64.7
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 7.8e-97 358.2 398 52.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 2.3e-96 356.7 271 64.6
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 8.6e-96 354.8 266 66.5
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.1e-95 354.4 267 64.4
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.9e-95 353.6 271 65.3
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 7.3e-95 351.7 273 65.2
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 3.1e-93 346.3 270 63.0
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 4.0e-93 345.9 270 63.3
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.9e-93 344.7 262 64.5
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 8.9e-93 344.7 271 62.7
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.2e-92 344.4 258 65.5
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.0e-92 343.6 317 56.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 2.2e-91 340.1 267 63.3
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.8e-91 339.3 200 86.0
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.7e-89 333.2 283 59.7
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.9e-87 327.0 300 56.0
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 3.4e-84 316.2 245 62.0
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 8.4e-83 311.6 387 45.7
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 5.4e-82 308.9 261 60.5
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 6.2e-78 295.4 267 55.8
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 1.1e-77 294.7 274 54.0
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.4e-77 293.5 245 70.6
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.3e-77 292.4 275 54.2
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.3e-77 292.4 275 54.2
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.6e-76 288.5 190 74.7
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.4e-74 283.5 224 62.9
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 2.7e-65 253.4 192 64.6
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.9e-27 127.1 138 55.8
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 8.5e-27 125.6 117 55.6
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 9.7e-23 112.1 85 67.1
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.9e-19 100.5 121 46.3
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.5e-19 99.4 69 62.3
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 4.7e-17 93.2 69 56.5
HPP92_027580 Vanilla planifolia HOM05D004646 ORTHO05D005829 1.5e-15 88.2 71 73.2
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.6e-12 78.2 77 48.1
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 2.9e-11 73.9 66 50.0
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.5e-10 70.9 75 50.7
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 2.1e-09 67.8 53 50.9


User provided reference genes

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