Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 9.6e-259 896.3 467 100.0
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 3.7e-218 761.5 464 84.9
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 4.8e-218 761.1 463 84.9
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 4.8e-218 761.1 464 85.3
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 8.3e-218 760.4 464 84.7
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.1e-217 760.0 463 84.7
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 1.8e-217 759.2 464 84.7
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 2.4e-217 758.8 463 84.7
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 7.0e-217 757.3 464 84.7
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 2.0e-216 755.7 463 84.2
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 4.5e-216 754.6 463 84.0
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 7.7e-216 753.8 464 84.7
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 7.7e-216 753.8 463 84.2
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 2.2e-215 752.3 463 83.8
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 1.9e-214 749.2 464 84.3
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 1.9e-214 749.2 463 83.4
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 3.2e-214 748.4 466 83.7
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 3.2e-214 748.4 464 84.5
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 4.2e-214 748.0 464 83.4
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 5.5e-214 747.7 463 83.6
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 7.2e-214 747.3 464 83.6
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 1.2e-213 746.5 464 83.6
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.6e-213 746.1 466 83.3
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 2.1e-213 745.7 465 83.7
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 2.1e-213 745.7 464 83.8
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.7e-213 745.3 464 83.2
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 3.6e-213 745.0 464 83.2
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 4.7e-213 744.6 464 83.4
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 4.7e-213 744.6 464 83.6
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 8.0e-213 743.8 464 82.5
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 1.0e-212 743.4 464 83.2
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.0e-212 743.4 462 82.7
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.0e-212 743.4 463 82.3
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 1.8e-212 742.7 463 82.5
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 1.8e-212 742.7 463 82.9
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 4.0e-212 741.5 463 82.9
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 4.0e-212 741.5 462 82.3
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 5.2e-212 741.1 463 83.2
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 5.2e-212 741.1 464 82.5
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 6.8e-212 740.7 464 83.2
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 6.8e-212 740.7 463 82.3
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 6.8e-212 740.7 463 82.3
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 2.6e-211 738.8 462 82.9
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 3.4e-211 738.4 462 81.6
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 9.8e-211 736.9 462 81.6
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.3e-210 736.5 464 83.0
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 2.8e-210 735.3 463 82.3
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 3.7e-210 734.9 462 81.6
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 4.8e-210 734.6 463 81.6
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 1.4e-209 733.0 463 81.4
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 1.8e-209 732.6 463 82.5
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 2.4e-209 732.3 463 82.3
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.4e-209 732.3 463 82.3
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 3.1e-209 731.9 462 81.4
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 3.1e-209 731.9 462 81.4
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 7.0e-209 730.7 463 82.1
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 9.1e-209 730.3 463 82.1
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 9.1e-209 730.3 462 81.4
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.5e-208 728.4 463 81.9
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.5e-208 728.4 463 81.9
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 4.5e-208 728.0 463 81.9
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 7.7e-208 727.2 463 81.2
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 1.0e-207 726.9 463 81.6
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.3e-207 726.5 463 81.6
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 1.7e-207 726.1 463 81.4
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.6e-207 724.2 463 81.2
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.1e-206 723.4 463 81.6
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.5e-206 723.0 463 81.6
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 1.9e-206 722.6 463 81.2
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 1.9e-206 722.6 463 81.2
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 3.3e-206 721.8 463 79.7
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 3.3e-206 721.8 530 74.0
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 3.6e-205 718.4 464 80.4
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 4.7e-205 718.0 458 82.1
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 4.7e-205 718.0 463 79.5
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 1.4e-204 716.5 463 80.3
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 2.3e-204 715.7 463 79.7
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 3.0e-204 715.3 463 80.8
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.0e-204 714.9 463 81.2
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 4.0e-204 714.9 463 80.1
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 1.5e-203 713.0 464 81.7
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 4.9e-202 708.0 452 81.6
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 8.3e-202 707.2 562 69.4
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 1.1e-201 706.8 452 81.4
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 4.1e-201 704.9 562 69.2
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 5.4e-201 704.5 451 81.4
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.6e-200 703.0 463 78.6
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 5.0e-199 698.0 463 79.0
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 8.6e-199 697.2 462 79.2
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.1e-198 696.8 452 80.8
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 4.3e-198 694.9 601 65.2
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 2.1e-197 692.6 463 78.2
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 8.0e-197 690.6 463 76.9
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 7.5e-195 684.1 467 78.2
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.7e-194 681.8 452 79.9
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 4.9e-194 681.4 461 76.6
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 1.1e-193 680.2 464 77.4
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 7.8e-192 674.1 463 75.8
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 4.3e-190 668.3 464 77.8
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 2.6e-187 659.1 475 73.5
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 1.4e-180 636.7 464 74.6
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 6.0e-176 621.3 452 74.3
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 1.6e-173 613.2 454 70.9
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 1.2e-171 607.1 462 69.7
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 1.3e-170 603.6 470 68.9
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 1.7e-167 593.2 463 67.0
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 1.1e-164 583.9 420 74.0
AUR62027528 Chenopodium quinoa HOM05D003420 ORTHO05D003970 2.4e-164 582.8 464 69.2
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 3.5e-152 542.3 549 58.7
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 1.5e-150 537.0 463 62.2
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 7.6e-147 524.6 320 83.1
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 4.9e-146 521.9 475 62.9
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.9e-145 520.0 381 74.0
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 5.7e-142 508.4 460 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.0e-138 497.7 470 57.9
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 9.3e-137 491.1 463 60.0
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.2e-136 490.7 411 67.2
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 1.0e-122 444.5 476 50.2
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 2.6e-115 419.9 337 67.4
Glyma.03G026400 Glycine max HOM05D003420 ORTHO05D003970 2.0e-110 403.7 262 77.9
Lj4C710T4 Lonicera japonica HOM05D003420 ORTHO05D003970 7.0e-108 395.2 247 83.8
Ca_19959_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 7.7e-107 391.7 249 80.7
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 5.0e-106 389.0 463 51.8
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 6.1e-104 382.1 310 70.3
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 2.3e-95 353.6 249 75.9
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.2e-93 347.1 252 73.8
AagrBONN_evm.TU.Sc2ySwM_117.1499 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.6e-91 340.9 340 58.5
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 2.6e-86 323.6 201 81.1
Glyma.03G026100 Glycine max HOM05D003420 ORTHO05D003970 1.8e-84 317.4 210 76.2
CARHR290960 Cardamine hirsuta HOM05D003420 ORTHO05D003970 4.1e-84 316.2 201 80.6
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.0e-82 311.6 280 66.1
SHI09126 Sapria himalayana HOM05D003420 ORTHO05D003970 5.6e-81 305.8 211 73.5
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 2.7e-75 287.0 155 90.3
Cpa.g.sc88.64 Carica papaya HOM05D003420 ORTHO05D003970 1.1e-73 281.6 171 86.5
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.1e-72 277.3 251 59.4
vmacro11080 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 1.9e-68 264.2 200 73.5
SHI09125 Sapria himalayana HOM05D003420 ORTHO05D003970 2.3e-66 257.3 177 76.3
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 3.1e-63 246.9 137 89.8
RcHm_v2.0_Chr1g0335051 Rosa chinensis HOM05D003420 ORTHO05D003970 7.8e-59 232.3 130 86.9
Haze_13387 Corylus avellana HOM05D003420 ORTHO05D003970 1.5e-57 228.0 130 86.9
CDE06G1435 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 4.3e-57 226.5 130 84.6
Ca_19960_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 1.2e-56 224.9 143 82.5
SGA_v2.0_scaffold24G10292 Striga asiatica HOM05D003420 ORTHO05D003970 1.5e-54 218.0 275 50.9
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 3.2e-52 210.3 118 88.1
SEGI_39176 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 8.7e-50 202.2 119 84.0
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 3.1e-47 193.7 511 31.3
Cc00_g30250 Coffea canephora HOM05D003420 ORTHO05D003970 4.0e-47 193.4 111 85.6
Hma1.2p1_1261F.1_g271140 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 4.2e-44 183.3 114 84.2
GSVIVG01022862001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.0e-42 178.7 114 82.5
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 3.9e-42 176.8 262 43.9
RcHm_v2.0_Chr1g0335061 Rosa chinensis HOM05D003420 ORTHO05D003970 1.5e-38 164.9 141 67.4
Actinidia06762 Actinidia chinensis HOM05D003420 ORTHO05D003970 3.7e-32 143.7 94 80.9
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 1.4e-31 141.7 538 24.0
CARHR290950 Cardamine hirsuta HOM05D003420 ORTHO05D003970 1.0e-29 135.6 108 71.3
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 1.9e-28 131.3 113 62.8
Sc02g0003480 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.2e-27 128.6 75 84.0
ClCG08G008060 Citrullus lanatus HOM05D003420 ORTHO05D003970 3.5e-27 127.1 172 52.3
SEGI_15136 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.1e-23 115.5 85 74.1
CANSAT56G3946 Cannabis sativa HOM05D003420 ORTHO05D003970 2.0e-22 111.3 81 72.8
SEGI_29399 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 6.1e-19 99.8 109 52.3
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 8.7e-18 95.9 70 65.7
Os02g0749500 Oryza sativa ssp. japonica HOM05D003420 ORTHO05D003970 1.6e-16 91.7 55 89.1
RcHm_v2.0_Chr1g0335071 Rosa chinensis HOM05D003420 ORTHO05D003970 4.8e-16 90.1 58 81.0
Actinidia22371 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.4e-15 88.6 96 58.3
SEGI_12719 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 2.4e-15 87.8 53 83.0
Haze_13388 Corylus avellana HOM05D011287 ORTHO05D013061 1.5e-14 85.1 63 73.0
Cfa025323 Carpinus fangiana HOM05D003420 ORTHO05D122787 1.3e-13 82.0 462 22.5
MBI01_g21241_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.1e-12 79.0 69 59.4
Migut.I00210 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.4e-10 72.0 73 56.2
Cpa.g.sc66.127 Carica papaya HOM05D003420 ORTHO05D003970 3.0e-10 70.9 46 82.6
PSO210G3754 Papaver somniferum HOM05D003420 ORTHO05D003970 2.8e-08 64.3 75 56.0
Cfa000383 Carpinus fangiana HOM05D003420 ORTHO05D003970 3.7e-08 63.9 41 80.5
Haze_13390 Corylus avellana HOM05D003420 ORTHO05D003970 3.7e-08 63.9 40 82.5
RcHm_v2.0_Chr2g0113821 Rosa chinensis HOM05D003420 ORTHO05D003970 9.1e-07 59.3 31 87.1
Haze_13391 Corylus avellana HOM05D003420 ORTHO05D003970 1.5e-06 58.5 41 75.6
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.0e-06 58.2 40 77.5


User provided reference genes

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