Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002319 Vanilla planifolia HOM05D007989 ORTHO05D010087 1.1e-110 403.3 204 100.0
Zm00001eb033460 Zea mays HOM05D007989 ORTHO05D010087 2.1e-24 116.7 183 42.1
Nn1g05466 Nelumbo nucifera HOM05D007989 ORTHO05D010087 7.7e-19 98.2 186 37.1
MBI06_g03317_MAGBIO Magnolia biondii HOM05D007989 ORTHO05D010087 5.0e-18 95.5 177 39.0
Os08g0483100 Oryza sativa ssp. japonica HOM05D007989 ORTHO05D010087 1.1e-17 94.4 173 41.0
TAR628G0250 Trochodendron aralioides HOM05D007989 ORTHO05D010087 2.5e-17 93.2 172 34.9
Cfa002588 Carpinus fangiana HOM05D007989 ORTHO05D010087 7.2e-17 91.7 181 32.6
Migut.H02322 Erythranthe guttata HOM05D007989 ORTHO05D010087 2.7e-16 89.7 141 37.6
TWI53G0073 Tripterygium wilfordii HOM05D007989 ORTHO05D010087 4.7e-16 89.0 149 37.6
Haze_24825 Corylus avellana HOM05D007989 ORTHO05D010087 1.8e-15 87.0 172 30.8
Haze_24830 Corylus avellana HOM05D007989 ORTHO05D010087 1.8e-15 87.0 172 30.8
Thecc.01G095100 Theobroma cacao HOM05D007989 ORTHO05D010087 3.0e-15 86.3 181 33.1
Aqoxy6G00707 Aquilegia oxysepala HOM05D007989 ORTHO05D010087 4.0e-15 85.9 172 29.1
FAN23G0861 Fragaria x ananassa HOM05D007989 ORTHO05D010087 6.7e-15 85.1 169 36.1
Prupe.6G193900 Prunus persica HOM05D007989 ORTHO05D010087 8.8e-15 84.7 182 33.0
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 1.2e-14 84.3 161 36.6
MD15G1317900 Malus domestica HOM05D007989 ORTHO05D010087 1.2e-14 84.3 165 36.4
FvH4_1g20210 Fragaria vesca HOM05D007989 ORTHO05D010087 1.5e-14 84.0 169 35.5
FAN19G2348 Fragaria x ananassa HOM05D007989 ORTHO05D010087 2.0e-14 83.6 169 35.5
FAN26G0087 Fragaria x ananassa HOM05D007989 ORTHO05D010087 2.6e-14 83.2 169 35.5
COL.COLO4_27300 Corchorus olitorius HOM05D007989 ORTHO05D010087 4.4e-14 82.4 203 31.0
Duzib147G0239 Durio zibethinus HOM05D007989 ORTHO05D010087 4.4e-14 82.4 184 30.4
EL10Ac6g14814 Beta vulgaris HOM05D007989 ORTHO05D010087 9.7e-14 81.3 181 30.9
RcHm_v2.0_Chr2g0112271 Rosa chinensis HOM05D007989 ORTHO05D010087 9.7e-14 81.3 159 34.6
QL06p047951 Quercus lobata HOM05D007989 ORTHO05D010087 1.3e-13 80.9 226 27.9
Manes.13G097300 Manihot esculenta HOM05D007989 ORTHO05D010087 1.7e-13 80.5 174 35.1
Atru.chr3.1338 Acer truncatum HOM05D007989 ORTHO05D010087 6.3e-13 78.6 166 33.7
PSO541G3922 Papaver somniferum HOM05D007989 ORTHO05D010087 6.3e-13 78.6 175 33.7
MD01G1036700 Malus domestica HOM05D007989 ORTHO05D010087 8.2e-13 78.2 165 35.2
CiPaw.04G104100 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.1e-12 77.8 174 29.3
Nitab4.5_0005930g0030 Nicotiana tabacum HOM05D007989 ORTHO05D010087 1.1e-12 77.8 186 31.2
Cpa.g.sc55.66 Carica papaya HOM05D007989 ORTHO05D010087 1.4e-12 77.4 160 33.8
PSO675G2967 Papaver somniferum HOM05D007989 ORTHO05D010087 1.4e-12 77.4 194 28.9
Ciclev10026467m.g Citrus clementina HOM05D007989 ORTHO05D010087 4.1e-12 75.9 166 32.5
FAN28G0040 Fragaria x ananassa HOM05D007989 ORTHO05D010087 4.1e-12 75.9 165 33.9
Gohir.D03G040900 Gossypium hirsutum HOM05D007989 ORTHO05D010087 7.0e-12 75.1 200 28.5
Nitab4.5_0000241g0120 Nicotiana tabacum HOM05D007989 ORTHO05D010087 7.0e-12 75.1 188 30.9
CANSAT01G0464 Cannabis sativa HOM05D007989 ORTHO05D010087 1.2e-11 74.3 185 30.3
CiPaw.03G146300 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.2e-11 74.3 195 28.2
AUR62027199 Chenopodium quinoa HOM05D007989 ORTHO05D010087 1.2e-11 74.3 167 30.5
Gorai.003G041700 Gossypium raimondii HOM05D007989 ORTHO05D010087 2.0e-11 73.6 200 28.5
CAN.G905.6 Capsicum annuum HOM05D007989 ORTHO05D010087 2.7e-11 73.2 157 30.6
Gohir.A02G130000 Gossypium hirsutum HOM05D007989 ORTHO05D010087 2.7e-11 73.2 196 28.6
Potri.005G071400 Populus trichocarpa HOM05D007989 ORTHO05D010087 1.0e-10 71.2 202 30.7
PGR004G2401 Punica granatum HOM05D007989 ORTHO05D010087 1.0e-10 71.2 134 35.8
Sopen11g005100 Solanum pennellii HOM05D007989 ORTHO05D010087 2.2e-10 70.1 147 31.3
PGSC0003DMG401016146 Solanum tuberosum HOM05D007989 ORTHO05D010087 1.5e-09 67.4 150 31.3
Oeu002158.1 Olea europaea HOM05D007989 ORTHO05D010087 1.9e-09 67.0 106 38.7
Sabra05G0058400 Salix brachista HOM05D007989 ORTHO05D010087 4.2e-09 65.9 175 30.9
Solyc11g010320.1 Solanum lycopersicum HOM05D007989 ORTHO05D010087 7.2e-09 65.1 144 30.6
VMungo1383G0535 Vigna mungo HOM05D007989 ORTHO05D010087 9.4e-09 64.7 166 33.1
Glyma.18G014700 Glycine max HOM05D007989 ORTHO05D010087 1.6e-08 63.9 156 35.3
Rhsim10G0168900 Rhododendron simsii HOM05D007989 ORTHO05D010087 1.8e-07 60.5 134 31.3
Hma1.2p1_0019F.1_g013880 Hydrangea macrophylla HOM05D007989 ORTHO05D010087 2.3e-07 60.1 134 32.1
Aa31LG1G27930 Aethionema arabicum HOM05D002476 ORTHO05D002652 4.0e-07 59.3 161 29.2
Glyma.11G242400 Glycine max HOM05D007989 ORTHO05D010087 1.2e-06 57.8 161 31.7
Potri.007G097400 Populus trichocarpa HOM05D007989 ORTHO05D010087 4.4e-06 55.8 174 27.0
Actinidia06535 Actinidia chinensis HOM05D007989 ORTHO05D010087 7.5e-06 55.1 118 36.4
arahy.Tifrunner.gnm1.ann1.FU6RJX Arachis hypogaea HOM05D007989 ORTHO05D010087 7.5e-06 55.1 134 32.8
Sc16g0000320 Simmondsia chinensis HOM05D007989 ORTHO05D010087 9.8e-06 54.7 114 34.2


User provided reference genes

Program Settings