Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 4.7e-85 317.8 155 100.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 2.5e-30 136.0 134 56.0
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 8.1e-29 131.0 134 53.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.1e-28 130.6 133 51.9
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.4e-28 130.2 124 54.0
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 3.1e-28 129.0 126 56.3
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 6.9e-28 127.9 135 51.9
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.0e-27 126.3 121 52.9
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 5.8e-27 124.8 122 54.9
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.0e-26 124.0 127 53.5
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.2e-26 122.9 122 54.1
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 2.2e-26 122.9 129 51.9
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 2.9e-26 122.5 126 51.6
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 2.9e-26 122.5 129 52.7
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 3.8e-26 122.1 128 50.0
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 3.8e-26 122.1 128 50.0
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 4.9e-26 121.7 124 52.4
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 6.5e-26 121.3 146 49.3
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 6.5e-26 121.3 126 53.2
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 8.4e-26 120.9 129 49.6
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 8.4e-26 120.9 124 53.2
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 8.4e-26 120.9 121 52.9
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.1e-25 120.6 123 52.0
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 1.9e-25 119.8 121 52.9
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.5e-25 119.4 121 52.1
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 2.5e-25 119.4 123 51.2
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 3.2e-25 119.0 130 50.8
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 4.2e-25 118.6 123 52.8
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 4.2e-25 118.6 123 52.8
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 5.5e-25 118.2 121 50.4
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 1.2e-24 117.1 118 51.7
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.2e-24 117.1 132 50.0
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.2e-24 117.1 122 51.6
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.6e-24 116.7 131 50.4
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 2.1e-24 116.3 127 51.2
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.1e-24 116.3 121 49.6
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.7e-24 115.9 121 50.4
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 3.5e-24 115.5 131 49.6
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.5e-24 115.5 122 50.8
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 3.5e-24 115.5 128 49.2
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 4.6e-24 115.2 122 50.8
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 4.6e-24 115.2 121 51.2
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.6e-24 115.2 131 50.4
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 6.0e-24 114.8 126 49.2
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 7.9e-24 114.4 121 50.4
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 7.9e-24 114.4 132 48.5
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.0e-23 114.0 131 48.1
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 1.0e-23 114.0 121 51.2
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 1.0e-23 114.0 122 50.0
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.0e-23 114.0 125 49.6
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 1.0e-23 114.0 128 49.2
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.8e-23 113.2 121 51.2
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.8e-23 113.2 121 47.9
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 2.3e-23 112.8 131 48.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.3e-23 112.8 125 48.8
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.3e-23 112.8 125 49.6
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 2.3e-23 112.8 127 48.8
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 3.0e-23 112.5 125 49.6
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 5.1e-23 111.7 131 47.3
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.1e-23 111.7 125 49.6
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 6.7e-23 111.3 124 46.8
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 6.7e-23 111.3 125 49.6
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 8.7e-23 110.9 119 49.6
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 8.7e-23 110.9 136 44.1
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 8.7e-23 110.9 121 47.9
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.1e-22 110.5 124 50.0
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.1e-22 110.5 123 49.6
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.1e-22 110.5 121 47.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.5e-22 110.2 126 48.4
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 1.5e-22 110.2 124 49.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 1.9e-22 109.8 128 48.4
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 2.5e-22 109.4 127 47.2
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 2.5e-22 109.4 125 45.6
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 3.3e-22 109.0 127 49.6
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 9.6e-22 107.5 152 44.7
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.3e-21 107.1 124 49.2
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.1e-21 106.3 127 48.0
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 2.8e-21 105.9 121 45.5
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 6.2e-21 104.8 124 49.2
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 6.2e-21 104.8 124 49.2
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 6.2e-21 104.8 124 49.2
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.1e-20 102.4 124 48.4
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 4.0e-20 102.1 129 41.9
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 5.3e-20 101.7 121 46.3
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.2e-19 100.5 124 47.6
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 2.0e-19 99.8 136 46.3
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.6e-19 99.4 125 45.6
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 5.8e-19 98.2 120 45.8
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 5.0e-18 95.1 122 44.3
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.4e-17 93.6 126 45.2
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.2e-17 92.0 131 37.4
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 5.5e-17 91.7 127 42.5
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 1.6e-16 90.1 122 41.0
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.1e-16 89.7 108 43.5
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 4.6e-16 88.6 117 44.4
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 7.9e-16 87.8 86 50.0
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.8e-15 86.7 122 42.6
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.1e-14 84.0 120 39.2
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 4.3e-14 82.0 207 31.4
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.3e-13 80.5 198 29.8
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.4e-12 77.0 63 61.9
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 6.9e-12 74.7 69 55.1
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 9.0e-12 74.3 65 53.8
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 1.5e-11 73.6 133 33.1
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 3.4e-11 72.4 138 34.8
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.1e-09 67.4 123 35.8
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.4e-09 67.0 129 36.4
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 2.5e-06 56.2 77 42.9


User provided reference genes

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