Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.9e-125 453.4 406 100.0
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 7.5e-42 175.6 388 52.8
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 9.9e-42 175.3 396 42.7
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.6e-39 167.9 388 40.2
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 6.0e-39 166.0 401 50.9
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 4.3e-37 159.8 388 52.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 4.3e-37 159.8 396 43.9
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 9.5e-37 158.7 388 51.8
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.1e-36 157.5 388 52.3
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.1e-36 157.5 390 45.1
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 2.8e-36 157.1 388 41.5
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.4e-35 154.8 395 42.5
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 2.4e-35 154.1 391 43.5
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 4.0e-35 153.3 389 53.0
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 5.2e-35 152.9 395 50.4
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 1.2e-34 151.8 388 44.1
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.0e-34 151.0 388 51.5
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.6e-34 150.6 398 41.2
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.4e-34 150.2 395 48.9
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 5.8e-34 149.4 395 42.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.7e-33 147.9 331 55.0
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.2e-33 147.5 399 42.1
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 2.9e-33 147.1 403 40.7
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 4.9e-33 146.4 388 42.3
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 6.4e-33 146.0 388 42.5
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.9e-32 144.4 405 49.1
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 1.6e-31 141.4 392 49.7
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 2.1e-31 141.0 388 50.3
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 4.6e-31 139.8 388 41.2
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.3e-30 138.3 388 41.2
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.3e-30 138.3 388 42.0
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 3.9e-30 136.7 396 39.1
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 8.7e-30 135.6 390 39.5
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.1e-29 135.2 362 43.6
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.9e-29 134.4 362 43.4
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 2.1e-28 131.0 390 47.7
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 2.8e-28 130.6 388 47.9
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.4e-27 128.3 407 46.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.4e-27 128.3 404 45.5
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.1e-27 127.1 399 38.3
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 4.0e-27 126.7 398 47.2
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.6e-26 124.0 403 38.2
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 4.4e-26 123.2 388 39.2
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 5.8e-26 122.9 386 37.6
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 7.6e-26 122.5 391 37.6
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 9.9e-26 122.1 385 46.2
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.3e-25 121.7 317 51.1
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.7e-25 121.3 395 47.8
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 8.4e-25 119.0 386 36.8
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.1e-24 118.6 386 36.8
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 3.2e-24 117.1 388 47.4
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.2e-24 116.7 407 37.1
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 7.1e-24 115.9 270 33.0
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.2e-23 115.2 397 45.6
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.6e-23 114.8 397 45.3
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 1.6e-23 114.8 386 46.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.1e-23 114.4 388 46.9
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 2.7e-23 114.0 397 45.3
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.7e-23 114.0 388 55.4
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 2.7e-23 114.0 388 54.9
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.7e-23 114.0 388 37.6
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 6.0e-23 112.8 398 45.5
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.0e-22 112.1 388 55.2
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 5.1e-22 109.8 385 36.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 2.5e-21 107.5 433 35.3
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 9.6e-21 105.5 395 26.6
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 8.1e-20 102.4 435 23.4
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.4e-19 101.7 396 35.1
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 2.0e-18 97.8 279 42.7
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.6e-18 97.4 172 36.6
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 4.5e-18 96.7 252 27.4
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 5.8e-18 96.3 404 34.7
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.4e-16 90.9 276 27.5
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 3.2e-16 90.5 169 34.9
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 7.1e-16 89.4 404 55.7
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.6e-15 88.2 168 36.9
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 6.0e-15 86.3 157 69.4
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 7.4e-13 79.3 155 35.5
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 9.6e-13 79.0 46 78.3
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 1.6e-12 78.2 45 77.8
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.8e-12 77.4 46 73.9
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 2.8e-12 77.4 167 29.9
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.7e-12 77.0 46 76.1
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 4.8e-12 76.6 46 76.1
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 6.2e-12 76.3 45 73.3
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.1e-11 75.5 46 73.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.1e-11 75.5 46 73.9
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.4e-11 75.1 44 77.3
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.8e-11 74.7 45 68.9
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.4e-11 74.3 45 73.3
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-11 73.9 45 71.1
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 5.3e-11 73.2 155 67.1
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.0e-10 71.2 45 71.1
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 4.5e-10 70.1 157 79.6
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 4.5e-10 70.1 157 80.3
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.3e-09 68.6 259 25.5
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.3e-09 68.6 45 66.7
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.3e-09 68.6 42 76.2
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 9.3e-08 62.4 46 60.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.6e-07 61.6 45 60.0
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 2.7e-07 60.8 148 33.8


User provided reference genes

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