Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002232 Vanilla planifolia HOM05D000797 ORTHO05D007726 7.8e-180 633.6 314 100.0
HPP92_002152 Vanilla planifolia HOM05D000797 ORTHO05D007726 2.1e-68 263.5 390 45.4
Nn3g21531 Nelumbo nucifera HOM05D000797 ORTHO05D007726 1.4e-32 144.4 293 34.5
MBI19_g34790_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D007726 1.0e-30 138.3 285 35.4
Aqoxy5G00779 Aquilegia oxysepala HOM05D000797 ORTHO05D007726 2.3e-30 137.1 287 34.5
Hma1.2p1_0804F.1_g221000 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 6.7e-30 135.6 278 34.5
GSVIVG01035121001 Vitis vinifera HOM05D000797 ORTHO05D007726 1.5e-29 134.4 292 33.6
Cfa014702 Carpinus fangiana HOM05D000797 ORTHO05D007726 7.4e-29 132.1 297 34.7
EL10Ac3g06632 Beta vulgaris HOM05D000797 ORTHO05D007726 9.7e-29 131.7 278 34.2
AUR62032016 Chenopodium quinoa HOM05D000797 ORTHO05D007726 9.7e-29 131.7 243 36.2
PGR004G0333 Punica granatum HOM05D000797 ORTHO05D007726 9.7e-29 131.7 282 34.8
TAR362G0149 Trochodendron aralioides HOM05D001727 ORTHO05D007726 9.7e-29 131.7 291 32.3
Cpa.g.sc50.171 Carica papaya HOM05D000797 ORTHO05D007726 1.3e-28 131.3 283 33.9
Manes.03G198100 Manihot esculenta HOM05D000797 ORTHO05D007726 2.2e-28 130.6 285 34.0
CiPaw.01G145900 Carya illinoinensis HOM05D000797 ORTHO05D007726 2.8e-28 130.2 296 33.4
Lsat_1_v5_gn_3_24121 Lactuca sativa HOM05D000797 ORTHO05D007726 2.8e-28 130.2 287 33.4
Sc13g0003290 Simmondsia chinensis HOM05D000797 ORTHO05D007726 2.8e-28 130.2 297 34.3
ECA246G2476 Erigeron canadensis HOM05D000797 ORTHO05D007726 3.7e-28 129.8 287 33.4
Zm00001eb130640 Zea mays HOM05D000797 ORTHO05D007726 3.7e-28 129.8 284 33.8
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 6.3e-28 129.0 282 33.0
Migut.G00134 Erythranthe guttata HOM05D000797 ORTHO05D007726 6.3e-28 129.0 289 32.9
PSO832G1872 Papaver somniferum HOM05D000797 ORTHO05D007726 6.3e-28 129.0 291 33.0
Lj6A680T85 Lonicera japonica HOM05D000797 ORTHO05D007726 8.2e-28 128.6 179 44.1
PSO210G3438 Papaver somniferum HOM05D000797 ORTHO05D007726 1.1e-27 128.3 291 32.6
Thecc.04G288000 Theobroma cacao HOM05D000797 ORTHO05D007726 1.1e-27 128.3 285 34.0
MELO3C006679.2 Cucumis melo HOM05D000797 ORTHO05D007726 2.4e-27 127.1 285 32.6
Lalb_Chr12g0196651 Lupinus albus HOM05D000797 ORTHO05D007726 2.4e-27 127.1 416 29.8
Eucgr.H03953 Eucalyptus grandis HOM05D000797 ORTHO05D007726 3.1e-27 126.7 284 33.5
SGA_v2.0_scaffold67G22605 Striga asiatica HOM05D000797 ORTHO05D007726 3.1e-27 126.7 295 32.5
AT3G06850 Arabidopsis thaliana HOM05D000797 ORTHO05D007726 4.1e-27 126.3 276 34.8
Actinidia40296 Actinidia chinensis HOM05D000797 ORTHO05D007726 5.3e-27 125.9 292 32.2
CSS0044303 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D007726 5.3e-27 125.9 293 32.4
MD13G1165700 Malus domestica HOM05D000797 ORTHO05D007726 5.3e-27 125.9 274 34.3
Potri.010G011300 Populus trichocarpa HOM05D000797 ORTHO05D007726 5.3e-27 125.9 287 33.8
THA.LOC104818913 Tarenaya hassleriana HOM05D000797 ORTHO05D007726 5.3e-27 125.9 274 34.3
CsaV3_3G014830 Cucumis sativus L. HOM05D000797 ORTHO05D007726 6.9e-27 125.6 285 32.6
Os01g0314100 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D007726 9.0e-27 125.2 284 33.5
AL3G17970 Arabidopsis lyrata HOM05D000797 ORTHO05D007726 1.5e-26 124.4 277 34.7
Sabra10G0007300 Salix brachista HOM05D000797 ORTHO05D007726 1.5e-26 124.4 399 29.1
CAN.G1137.1 Capsicum annuum HOM05D000797 ORTHO05D007726 2.6e-26 123.6 281 32.4
Hund20525 Selenicereus undatus HOM05D000797 ORTHO05D007726 2.6e-26 123.6 275 32.0
PGSC0003DMG400011330 Solanum tuberosum HOM05D000797 ORTHO05D007726 3.4e-26 123.2 282 31.9
QL06p010151 Quercus lobata HOM05D000797 ORTHO05D007726 4.5e-26 122.9 295 33.9
Carub.0003s0638 Capsella rubella HOM05D000797 ORTHO05D007726 5.9e-26 122.5 276 33.7
Ca_21482_v3 Cicer arietinum L. HOM05D000797 ORTHO05D007726 5.9e-26 122.5 173 44.5
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 5.9e-26 122.5 278 33.5
Gohir.A09G237700 Gossypium hirsutum HOM05D000797 ORTHO05D007726 5.9e-26 122.5 287 32.4
Nitab4.5_0005312g0020 Nicotiana tabacum HOM05D000797 ORTHO05D007726 5.9e-26 122.5 281 32.7
Prupe.1G132500 Prunus persica HOM05D000797 ORTHO05D007726 5.9e-26 122.5 282 31.9
Rhsim04G0224800 Rhododendron simsii HOM05D000797 ORTHO05D007726 5.9e-26 122.5 292 31.8
Sed0017832 Sechium edule HOM05D000797 ORTHO05D007726 5.9e-26 122.5 286 31.5
Glyma.07G246000 Glycine max HOM05D000797 ORTHO05D007726 7.7e-26 122.1 310 31.0
RcHm_v2.0_Chr4g0423151 Rosa chinensis HOM05D000797 ORTHO05D007726 7.7e-26 122.1 285 32.3
Atru.chr4.2892 Acer truncatum HOM05D000797 ORTHO05D007726 1.0e-25 121.7 277 33.2
CARHR081460 Cardamine hirsuta HOM05D000797 ORTHO05D007726 1.0e-25 121.7 285 33.0
FvH4_4g18561 Fragaria vesca HOM05D000797 ORTHO05D007726 1.0e-25 121.7 284 31.7
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.0e-25 121.7 285 31.9
Peaxi162Scf00065g01524 Petunia axillaris HOM05D000797 ORTHO05D007726 1.3e-25 121.3 287 31.7
Haze_13326 Corylus avellana HOM05D000797 ORTHO05D007726 1.7e-25 120.9 178 43.8
TPR.G3182 Trifolium pratense HOM05D000797 ORTHO05D007726 1.7e-25 120.9 307 31.3
arahy.Tifrunner.gnm1.ann1.BZZQ7R Arachis hypogaea HOM05D000797 ORTHO05D007726 2.2e-25 120.6 177 45.2
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 2.2e-25 120.6 177 45.2
A03p34910 Brassica napus HOM05D000797 ORTHO05D007726 2.2e-25 120.6 268 34.3
Gohir.D09G238600 Gossypium hirsutum HOM05D000797 ORTHO05D007726 2.2e-25 120.6 287 32.1
Gorai.006G261300 Gossypium raimondii HOM05D000797 ORTHO05D007726 2.2e-25 120.6 287 32.1
Sp3g05810 Schrenkiella parvula HOM05D000797 ORTHO05D007726 2.2e-25 120.6 286 33.6
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 2.9e-25 120.2 174 43.7
Solyc01g066520.3 Solanum lycopersicum HOM05D000797 ORTHO05D007726 2.9e-25 120.2 282 31.2
Sopen01g028100 Solanum pennellii HOM05D000797 ORTHO05D007726 2.9e-25 120.2 282 31.2
vmacro08180 Vaccinium macrocarpon HOM05D000797 ORTHO05D007726 2.9e-25 120.2 292 32.2
Thhalv10020615m.g Eutrema salsugineum HOM05D000797 ORTHO05D007726 8.5e-25 118.6 281 34.2
Glyma.17G028000 Glycine max HOM05D000797 ORTHO05D007726 8.5e-25 118.6 308 30.8
HanXRQChr17g0536081 Helianthus annuus HOM05D000797 ORTHO05D007726 8.5e-25 118.6 286 31.8
Actinidia19577 Actinidia chinensis HOM05D000797 ORTHO05D007726 1.1e-24 118.2 297 30.3
BraA03t12671Z Brassica rapa HOM05D000797 ORTHO05D007726 1.1e-24 118.2 282 33.0
ClCG05G006220 Citrullus lanatus HOM05D000797 ORTHO05D007726 1.4e-24 117.9 281 31.3
Nitab4.5_0000695g0030 Nicotiana tabacum HOM05D000797 ORTHO05D007726 1.4e-24 117.9 287 31.4
Psat4g026280 Pisum sativum HOM05D000797 ORTHO05D007726 1.4e-24 117.9 174 43.1
unitig_748.g8725 Utricularia gibba HOM05D000797 ORTHO05D007726 1.4e-24 117.9 168 41.1
C03p42490 Brassica napus HOM05D000797 ORTHO05D007726 1.9e-24 117.5 271 33.6
BolC3t16519H Brassica oleracea HOM05D000797 ORTHO05D007726 1.9e-24 117.5 271 33.6
Phvul.003G106700 Phaseolus vulgaris HOM05D000797 ORTHO05D007726 1.9e-24 117.5 310 30.6
VMungo1215G0560 Vigna mungo HOM05D000797 ORTHO05D007726 1.9e-24 117.5 310 30.0
Ciclev10004761m.g Citrus clementina HOM05D000797 ORTHO05D007726 2.5e-24 117.1 291 30.9
Ah.04g153650 Amaranthus hybridus HOM05D000797 ORTHO05D007726 3.2e-24 116.7 156 44.9
ATR0796G192 Amborella trichopoda HOM05D000797 ORTHO05D007726 5.5e-24 115.9 288 30.6
SalBow2G1825 Salvia bowleyana HOM05D000797 ORTHO05D007726 5.5e-24 115.9 180 40.6
TWI73G1204 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 1.2e-23 114.8 291 30.6
Dinv44356 Davidia involucrata HOM05D000797 ORTHO05D007726 2.1e-23 114.0 76 68.4
Medtr4g120220 Medicago truncatula HOM05D000797 ORTHO05D007726 2.1e-23 114.0 176 43.2
Hma1.2p1_0804F.1_g221010 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 2.7e-23 113.6 76 68.4
arahy.Tifrunner.gnm1.ann1.W1BVEK Arachis hypogaea HOM05D000797 ORTHO05D007726 4.6e-23 112.8 164 45.1
MSTRG.10111 Avicennia marina HOM05D000797 ORTHO05D007726 7.9e-23 112.1 300 31.0
CANSAT78G2398 Cannabis sativa HOM05D000797 ORTHO05D007726 1.0e-22 111.7 285 31.2
Cc03_g01610 Coffea canephora HOM05D000797 ORTHO05D007726 1.0e-22 111.7 309 29.8
TWI09G1463 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 2.3e-22 110.5 290 30.0
CDE12G0277 Ceratophyllum demersum HOM05D000797 ORTHO05D007726 5.1e-22 109.4 100 57.0
Potri.008G219700 Populus trichocarpa HOM05D000797 ORTHO05D007726 1.2e-18 98.2 261 32.2
arahy.Tifrunner.gnm1.ann1.632TA6 Arachis hypogaea HOM05D000797 ORTHO05D007726 3.6e-15 86.7 108 49.1
SMO356G0665 Selaginella moellendorffii HOM05D000797 ORTHO05D007726 7.9e-15 85.5 285 27.0
Lsat_1_v5_gn_7_19781 Lactuca sativa HOM05D000797 ORTHO05D007726 6.7e-14 82.4 58 62.1
Pp3c7_200 Physcomitrium patens HOM05D000797 ORTHO05D007726 8.8e-14 82.0 66 63.6
Cre04.g228350 Chlamydomonas reinhardtii HOM05D000797 ORTHO05D007726 1.5e-13 81.3 97 46.4
Mapoly0127s0040 Marchantia polymorpha HOM05D000797 ORTHO05D007726 1.5e-13 81.3 309 25.2
PRCOL_00005061 Prasinoderma coloniale HOM05D000797 ORTHO05D007726 3.3e-13 80.1 67 53.7
Duzib212G0824 Durio zibethinus HOM05D000797 ORTHO05D007726 4.4e-13 79.7 255 30.2
AUR62018093 Chenopodium quinoa HOM05D000797 ORTHO05D007726 2.2e-09 67.4 243 29.2
Cfa024475 Carpinus fangiana HOM05D000797 ORTHO05D007726 9.4e-08 62.0 173 26.6
arahy.Tifrunner.gnm1.ann1.G9AJXB Arachis hypogaea HOM05D000797 ORTHO05D019786 1.6e-07 61.2 69 49.3


User provided reference genes

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