Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 7.9e-194 680.2 342 100.0
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 8.2e-106 387.9 335 62.4
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 2.6e-104 382.9 327 64.2
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.1e-101 373.2 326 62.3
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 7.9e-101 371.3 334 61.4
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 3.9e-100 369.0 333 60.4
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 2.5e-99 366.3 264 69.3
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 4.3e-99 365.5 266 69.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 7.4e-99 364.8 268 69.0
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.2e-98 363.2 323 60.7
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.2e-98 363.2 334 59.6
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 2.8e-98 362.8 326 59.5
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-98 361.3 287 65.9
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-98 361.3 287 65.9
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.1e-97 360.9 272 68.4
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-97 360.9 270 67.8
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.4e-97 360.5 330 59.4
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.4e-97 360.5 300 63.3
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 1.4e-97 360.5 275 68.0
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-97 360.1 300 63.3
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-97 360.1 260 70.4
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 2.4e-97 359.8 290 65.9
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 2.4e-97 359.8 270 68.9
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 2.4e-97 359.8 301 63.1
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 4.1e-97 359.0 296 63.9
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 5.3e-97 358.6 265 69.4
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.3e-97 358.6 276 66.7
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 9.0e-97 357.8 257 72.8
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.2e-96 357.5 261 70.9
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 2.6e-96 356.3 276 67.0
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 2.6e-96 356.3 267 70.4
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 3.4e-96 355.9 259 69.9
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 3.4e-96 355.9 336 59.5
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 4.5e-96 355.5 256 71.5
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 4.5e-96 355.5 256 71.5
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 7.6e-96 354.8 263 69.6
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 7.6e-96 354.8 255 70.6
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.0e-95 354.4 266 69.5
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 1.3e-95 354.0 261 70.1
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.3e-95 354.0 301 60.8
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 8.5e-95 351.3 307 62.5
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 8.5e-95 351.3 278 66.2
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 1.4e-94 350.5 256 71.5
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 1.9e-94 350.1 269 68.4
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.9e-94 350.1 278 65.1
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 1.9e-94 350.1 254 69.7
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 3.2e-94 349.4 267 68.2
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 3.2e-94 349.4 260 69.2
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 4.2e-94 349.0 268 66.0
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 4.2e-94 349.0 336 56.8
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 4.2e-94 349.0 260 68.8
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 5.5e-94 348.6 260 68.5
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 7.2e-94 348.2 256 69.5
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 7.2e-94 348.2 356 55.6
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 7.2e-94 348.2 310 61.3
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 9.3e-94 347.8 314 61.8
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 1.2e-93 347.4 310 61.3
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 1.6e-93 347.1 305 59.7
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 2.1e-93 346.7 263 68.4
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 2.7e-93 346.3 275 65.5
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.6e-93 345.5 255 68.2
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 7.9e-93 344.7 301 61.8
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 1.8e-92 343.6 287 62.7
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 3.0e-92 342.8 312 59.9
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 6.7e-92 341.7 258 66.7
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 8.8e-92 341.3 293 59.7
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.1e-91 340.9 307 62.2
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 1.5e-91 340.5 287 63.4
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 3.3e-91 339.3 272 64.7
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 4.3e-91 339.0 258 68.2
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 5.7e-91 338.6 303 59.1
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 7.4e-91 338.2 303 58.7
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.3e-90 337.4 270 63.7
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 1.3e-90 337.4 301 60.1
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.8e-90 336.3 269 64.3
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 4.8e-90 335.5 286 62.6
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 6.3e-90 335.1 286 62.6
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 8.2e-90 334.7 301 57.5
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-89 333.6 269 63.9
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 2.4e-89 333.2 309 57.6
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 2.4e-89 333.2 309 57.6
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.4e-89 333.2 269 63.6
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 3.1e-89 332.8 261 67.4
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 4.1e-89 332.4 303 59.4
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 5.3e-89 332.0 294 58.8
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 6.9e-89 331.6 285 62.5
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 1.2e-88 330.9 306 58.2
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 4.5e-88 328.9 267 64.8
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 8.5e-87 324.7 299 57.2
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 8.5e-87 324.7 200 77.5
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 2.5e-86 323.2 299 56.9
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 4.2e-86 322.4 299 56.9
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 9.4e-86 321.2 299 57.2
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.0e-84 317.8 269 64.3
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 3.9e-84 315.8 299 56.5
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 3.9e-84 315.8 299 56.5
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 3.3e-83 312.8 465 43.4
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 5.7e-83 312.0 255 63.5
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 9.7e-83 311.2 295 60.0
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 1.4e-81 307.4 230 69.6
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 2.6e-80 303.1 337 52.2
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.7e-79 300.4 230 68.7
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 6.5e-79 298.5 308 54.9
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 2.1e-77 293.5 226 68.6
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 1.4e-73 280.8 245 59.2
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.4e-73 280.8 275 57.8
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 1.2e-72 277.7 260 58.5
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.6e-72 277.3 197 72.1
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 2.6e-72 276.6 353 47.3
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 2.9e-71 273.1 278 52.9
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 3.8e-71 272.7 211 62.6
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 8.8e-68 261.5 193 64.2
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.3e-63 247.7 222 59.5
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 2.5e-62 243.4 142 82.4
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 1.2e-61 241.1 143 79.7
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 1.6e-61 240.7 144 78.5
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 9.8e-59 231.5 186 68.8
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 3.7e-58 229.6 143 78.3
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.1e-57 228.0 214 55.1
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 4.0e-52 209.5 416 36.5
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 1.5e-51 207.6 129 76.0
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.6e-51 206.8 152 65.1
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 9.8e-43 178.3 254 44.1
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.0e-31 140.2 166 46.4
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 5.1e-31 139.4 162 45.1
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 3.5e-24 116.7 171 40.9
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 1.1e-22 111.7 194 36.6
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 4.3e-22 109.8 125 51.2
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 8.9e-20 102.1 88 62.5
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 1.5e-19 101.3 133 48.9
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 6.4e-18 95.9 118 46.6
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 5.4e-17 92.8 123 45.5
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.2e-16 91.7 122 43.4
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 6.6e-15 85.9 122 41.8
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-14 85.1 61 60.7
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-14 85.1 129 39.5
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-14 85.1 61 60.7
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-14 84.7 109 40.4
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.3e-14 82.4 61 55.7
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.3e-14 82.4 61 55.7
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.8e-13 80.5 61 54.1
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 1.4e-12 78.2 166 31.9
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 3.1e-12 77.0 49 79.6
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 3.4e-11 73.6 193 31.1
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 3.4e-11 73.6 172 32.0
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 2.2e-10 70.9 168 29.2
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 2.4e-09 67.4 160 27.5
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 5.1e-07 59.7 88 34.1


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