Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002108 Vanilla planifolia HOM05D000233 ORTHO05D427186 3.6e-103 378.3 191 100.0
HPP92_002116 Vanilla planifolia HOM05D000233 ORTHO05D000020 5.1e-41 171.8 99 93.9
HPP92_002135 Vanilla planifolia HOM05D000233 ORTHO05D000020 4.3e-40 168.7 99 92.9
HPP92_002129 Vanilla planifolia HOM05D000233 ORTHO05D432502 5.7e-16 88.6 56 87.5
HPP92_011838 Vanilla planifolia HOM05D000233 ORTHO05D000020 3.2e-11 72.8 78 59.0
Rhsim04G0218800 Rhododendron simsii HOM05D000233 ORTHO05D000020 1.5e-08 63.9 51 66.7
vmacro08111 Vaccinium macrocarpon HOM05D000233 ORTHO05D000020 2.0e-08 63.5 51 64.7
CiPaw.02G084800 Carya illinoinensis HOM05D000233 ORTHO05D000020 2.6e-08 63.2 55 60.0
EL10Ac3g06487 Beta vulgaris HOM05D000233 ORTHO05D000020 3.4e-08 62.8 65 58.5
Duzib151G0722 Durio zibethinus HOM05D000233 ORTHO05D000020 4.4e-08 62.4 55 60.0
EL10Ac3g06582 Beta vulgaris HOM05D000233 ORTHO05D000020 5.7e-08 62.0 57 63.2
Aqoxy5G00673 Aquilegia oxysepala HOM05D000233 ORTHO05D000020 7.5e-08 61.6 51 60.8
Ah.07g208440 Amaranthus hybridus HOM05D000233 ORTHO05D000020 1.3e-07 60.8 42 69.0
TAR365G0974 Trochodendron aralioides HOM05D000233 ORTHO05D000020 1.3e-07 60.8 49 63.3
CiPaw.01G151000 Carya illinoinensis HOM05D000233 ORTHO05D000020 1.7e-07 60.5 55 60.0
Nn3g21374 Nelumbo nucifera HOM05D000233 ORTHO05D000020 1.7e-07 60.5 49 63.3
COL.COLO4_38481 Corchorus olitorius HOM05D000233 ORTHO05D000020 2.2e-07 60.1 52 63.5
MELO3C006626.2 Cucumis melo HOM05D000233 ORTHO05D000020 2.2e-07 60.1 56 58.9
CsaV3_3G014320 Cucumis sativus L. HOM05D000233 ORTHO05D000020 2.2e-07 60.1 56 58.9
Sed0005925 Sechium edule HOM05D000233 ORTHO05D000020 2.2e-07 60.1 51 60.8
Sed0008311 Sechium edule HOM05D000233 ORTHO05D000020 2.2e-07 60.1 94 46.8
Cfa015364 Carpinus fangiana HOM05D000233 ORTHO05D000020 2.8e-07 59.7 56 62.5
Haze_01242 Corylus avellana HOM05D000233 ORTHO05D000020 2.8e-07 59.7 56 62.5
FvH4_4g17630 Fragaria vesca HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
FAN07G0053 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
FAN12G1486 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
FAN12G3382 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
FAN17G2580 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
FAN22G1436 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
QL06p008072 Quercus lobata HOM05D000233 ORTHO05D000020 2.8e-07 59.7 56 57.1
RcHm_v2.0_Chr4g0421551 Rosa chinensis HOM05D000233 ORTHO05D000020 2.8e-07 59.7 51 62.7
SGA_v2.0_scaffold98G29328 Striga asiatica HOM05D000233 ORTHO05D000020 2.8e-07 59.7 49 59.2
Ciclev10006861m.g Citrus clementina HOM05D000233 ORTHO05D000020 3.7e-07 59.3 79 51.9
Manes.15G014600 Manihot esculenta HOM05D000233 ORTHO05D000020 3.7e-07 59.3 50 62.0
Oeu026304.1 Olea europaea HOM05D000233 ORTHO05D000020 3.7e-07 59.3 53 62.3
Sabra08G0155400 Salix brachista HOM05D000233 ORTHO05D000020 3.7e-07 59.3 49 61.2
COL.COLO4_13904 Corchorus olitorius HOM05D000233 ORTHO05D000020 4.8e-07 58.9 56 57.1
MD13G1171200 Malus domestica HOM05D000233 ORTHO05D000020 6.3e-07 58.5 51 60.8
DCAR_027093 Daucus carota HOM05D000233 ORTHO05D000020 8.3e-07 58.2 63 55.6
Duzib212G0199 Durio zibethinus HOM05D000233 ORTHO05D000020 8.3e-07 58.2 55 56.4
Nn4g25953 Nelumbo nucifera HOM05D000233 ORTHO05D000020 8.3e-07 58.2 101 42.6
Potri.008G215600 Populus trichocarpa HOM05D000233 ORTHO05D000020 8.3e-07 58.2 49 61.2
Prupe.1G139600 Prunus persica HOM05D000233 ORTHO05D000020 8.3e-07 58.2 51 60.8
Glyma.17G024300 Glycine max HOM05D000233 ORTHO05D000020 1.1e-06 57.8 60 55.0
Gohir.A02G047600 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.1e-06 57.8 44 63.6
Gohir.D02G052800 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.1e-06 57.8 44 63.6
Gorai.005G058700 Gossypium raimondii HOM05D000233 ORTHO05D000020 1.1e-06 57.8 44 63.6
Lalb_Chr07g0177601 Lupinus albus HOM05D000233 ORTHO05D000020 1.1e-06 57.8 42 66.7
MD16G1172800 Malus domestica HOM05D000233 ORTHO05D000020 1.4e-06 57.4 51 58.8
PSO210G2556 Papaver somniferum HOM05D000233 ORTHO05D000020 1.4e-06 57.4 49 59.2
PSO832G1799 Papaver somniferum HOM05D000233 ORTHO05D000020 1.4e-06 57.4 49 59.2
Phvul.006G163100 Phaseolus vulgaris HOM05D000233 ORTHO05D000020 1.4e-06 57.4 53 60.4
Ca_21536_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 2.4e-06 56.6 40 67.5
Gohir.A10G162300 Gossypium hirsutum HOM05D000233 ORTHO05D000020 2.4e-06 56.6 64 50.0
BcaB05g23337 Brassica carinata HOM05D000233 ORTHO05D000020 3.1e-06 56.2 49 61.2
Cc03_g02110 Coffea canephora HOM05D000233 ORTHO05D000020 3.1e-06 56.2 65 50.8
Thhalv10014022m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 3.1e-06 56.2 49 61.2
Glyma.07G250100 Glycine max HOM05D000233 ORTHO05D000020 3.1e-06 56.2 58 55.2
Lj3P814T26 Lonicera japonica HOM05D000233 ORTHO05D000020 3.1e-06 56.2 42 69.0
Lalb_Chr18g0055601 Lupinus albus HOM05D000233 ORTHO05D000020 3.1e-06 56.2 48 62.5
Sp6g25770 Schrenkiella parvula HOM05D000233 ORTHO05D000020 3.1e-06 56.2 49 61.2
Sc13g0003530 Simmondsia chinensis HOM05D000233 ORTHO05D000020 3.1e-06 56.2 35 77.1
VMungo0540G1618 Vigna mungo HOM05D000233 ORTHO05D000020 3.1e-06 56.2 53 60.4
Actinidia01945 Actinidia chinensis HOM05D000233 ORTHO05D000020 4.1e-06 55.8 43 62.8
Dinv38309 Davidia involucrata HOM05D000233 ORTHO05D000020 4.1e-06 55.8 97 43.3
Hma1.2p1_2251F.1_g318100 Hydrangea macrophylla HOM05D000233 ORTHO05D000020 4.1e-06 55.8 38 71.1
MBI18_g01957_MAGBIO Magnolia biondii HOM05D000233 ORTHO05D000020 4.1e-06 55.8 46 65.2
Atru.chr4.2790 Acer truncatum HOM05D000233 ORTHO05D000020 5.4e-06 55.5 36 72.2
Actinidia40245 Actinidia chinensis HOM05D000233 ORTHO05D000020 5.4e-06 55.5 34 76.5
CAN.G223.23 Capsicum annuum HOM05D000233 ORTHO05D000020 5.4e-06 55.5 43 65.1
Eucgr.H03870 Eucalyptus grandis HOM05D000233 ORTHO05D000020 5.4e-06 55.5 63 49.2
Solyc01g067540.2 Solanum lycopersicum HOM05D000233 ORTHO05D000020 5.4e-06 55.5 43 65.1
Sopen01g029490 Solanum pennellii HOM05D000233 ORTHO05D000020 5.4e-06 55.5 43 65.1
PGSC0003DMG400022667 Solanum tuberosum HOM05D000233 ORTHO05D000020 5.4e-06 55.5 43 65.1
TWI53G1835 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 5.4e-06 55.5 66 53.0
ECA233G3537 Erigeron canadensis HOM05D000233 ORTHO05D000020 7.0e-06 55.1 79 49.4
Lj6P671T25 Lonicera japonica HOM05D000233 ORTHO05D000020 7.0e-06 55.1 50 60.0
VMungo1215G2829 Vigna mungo HOM05D000233 ORTHO05D000020 7.0e-06 55.1 36 72.2
A02p04990 Brassica napus HOM05D000233 ORTHO05D000020 9.1e-06 54.7 49 59.2
BraA02t05458Z Brassica rapa HOM05D000233 ORTHO05D000020 9.1e-06 54.7 49 59.2
CANSAT78G2430 Cannabis sativa HOM05D000233 ORTHO05D000020 9.1e-06 54.7 37 73.0
Lalb_Chr13g0303751 Lupinus albus HOM05D000233 ORTHO05D000020 9.1e-06 54.7 63 52.4


User provided reference genes

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