Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 5.2e-98 361.3 217 100.0
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 3.5e-30 136.0 104 63.5
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 6.7e-29 131.7 101 61.4
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.5e-28 130.6 98 65.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.5e-28 130.6 101 61.4
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.9e-28 130.2 101 58.4
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 3.3e-28 129.4 104 56.7
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 4.3e-28 129.0 104 60.6
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.6e-28 127.9 101 57.4
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.6e-28 127.9 101 57.4
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 9.6e-28 127.9 101 57.4
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 9.6e-28 127.9 103 62.1
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 1.3e-27 127.5 103 62.1
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.3e-27 127.5 100 59.0
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.1e-27 126.7 100 59.0
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.1e-27 126.7 104 59.6
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.8e-27 126.3 101 57.4
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 2.8e-27 126.3 103 59.2
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 4.8e-27 125.6 100 59.0
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.8e-27 125.6 101 55.4
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 4.8e-27 125.6 103 57.3
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 4.8e-27 125.6 103 60.2
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 6.3e-27 125.2 100 60.0
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-26 124.4 101 55.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.1e-26 124.4 104 54.8
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.1e-26 124.4 100 60.0
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.4e-26 124.0 101 56.4
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.4e-26 124.0 101 58.4
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.8e-26 123.6 100 58.0
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 3.1e-26 122.9 101 56.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 4.1e-26 122.5 103 54.4
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 4.1e-26 122.5 104 53.8
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 4.1e-26 122.5 101 55.4
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 4.1e-26 122.5 103 57.3
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 4.1e-26 122.5 103 57.3
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 4.1e-26 122.5 98 62.2
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 5.3e-26 122.1 104 52.9
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 5.3e-26 122.1 104 55.8
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 5.3e-26 122.1 100 58.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.3e-26 122.1 158 43.0
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.3e-26 122.1 158 43.0
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 5.3e-26 122.1 166 42.2
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 6.9e-26 121.7 101 54.5
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 1.5e-25 120.6 101 56.4
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.0e-25 120.2 100 57.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 2.0e-25 120.2 158 43.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.0e-25 120.2 158 43.0
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.6e-25 119.8 101 57.4
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 3.4e-25 119.4 103 58.3
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 3.4e-25 119.4 99 57.6
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.4e-25 119.4 99 58.6
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.4e-25 119.4 115 53.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 4.5e-25 119.0 174 42.5
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 4.5e-25 119.0 160 53.1
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 5.9e-25 118.6 100 53.0
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 5.9e-25 118.6 103 55.3
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 7.6e-25 118.2 105 54.3
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 7.6e-25 118.2 103 55.3
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 7.6e-25 118.2 167 46.7
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 7.6e-25 118.2 102 56.9
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.0e-24 117.9 189 39.7
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.3e-24 117.5 102 55.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.7e-24 117.1 101 53.5
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 2.2e-24 116.7 189 38.1
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 3.8e-24 115.9 177 42.4
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.8e-24 115.9 177 42.4
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 6.5e-24 115.2 104 54.8
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 6.5e-24 115.2 174 47.1
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 6.5e-24 115.2 190 41.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.9e-23 113.6 101 49.5
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.9e-23 113.6 101 51.5
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 3.2e-23 112.8 96 59.4
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 4.2e-23 112.5 210 45.2
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.2e-22 110.9 98 55.1
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.2e-22 110.9 198 37.9
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 7.9e-22 108.2 206 34.5
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.0e-21 107.8 100 50.0
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.3e-21 107.5 170 51.8
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.3e-21 107.5 132 45.5
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.3e-21 107.5 101 52.5
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.3e-21 107.5 132 45.5
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.3e-21 107.5 132 45.5
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.3e-21 107.5 132 45.5
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.3e-21 107.5 101 52.5
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 5.1e-21 105.5 101 51.5
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.1e-20 104.4 96 58.3
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.1e-20 104.4 206 36.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 5.7e-20 102.1 170 47.1
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.4e-18 97.4 72 59.7
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 4.1e-18 95.9 83 49.4
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 5.7e-12 75.5 51 62.7
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 5.7e-12 75.5 104 38.5
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 9.7e-12 74.7 92 44.6
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.7e-11 73.9 46 67.4
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.7e-11 72.8 100 40.0
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.1e-10 71.2 46 63.0
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.1e-10 71.2 43 67.4
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.8e-10 70.5 97 43.3
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.0e-08 62.4 59 55.9
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 3.2e-07 59.7 86 37.2
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.2e-07 59.3 157 49.7


User provided reference genes

Program Settings