Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 4.3e-256 887.5 449 100.0
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.9e-46 191.0 478 32.6
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 3.6e-45 186.8 471 32.7
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 3.1e-44 183.7 514 30.7
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 2.4e-41 174.1 250 43.6
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 7.1e-41 172.6 477 32.7
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 6.0e-40 169.5 456 34.2
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.9e-38 164.5 482 31.1
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 1.6e-37 161.4 460 32.4
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 2.8e-37 160.6 271 41.0
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 3.6e-37 160.2 455 30.5
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 8.1e-37 159.1 451 34.4
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 1.1e-36 158.7 171 47.4
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.4e-36 158.3 462 31.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.4e-36 158.3 462 31.2
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.4e-36 158.3 447 29.8
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.4e-36 157.5 473 31.7
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 3.1e-36 157.1 357 30.5
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 6.8e-36 156.0 419 32.5
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 8.9e-36 155.6 256 42.2
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 8.9e-36 155.6 258 41.1
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 1.5e-35 154.8 480 31.0
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 4.4e-35 153.3 443 28.0
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 9.9e-35 152.1 473 29.2
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 2.2e-34 151.0 389 33.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 2.9e-34 150.6 455 32.5
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 3.8e-34 150.2 457 31.9
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 3.8e-34 150.2 484 30.6
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 4.9e-34 149.8 469 32.8
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 4.9e-34 149.8 255 38.4
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 4.9e-34 149.8 366 29.8
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 6.4e-34 149.4 479 30.1
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 6.4e-34 149.4 185 41.1
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 6.4e-34 149.4 183 45.4
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.9e-33 147.9 469 30.7
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 2.4e-33 147.5 451 32.2
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.2e-33 147.1 473 28.3
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 4.2e-33 146.7 461 31.0
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 7.1e-33 146.0 453 31.8
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 9.3e-33 145.6 475 30.9
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.6e-32 144.8 457 28.9
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.6e-32 144.8 457 31.5
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 2.1e-32 144.4 472 28.4
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.5e-32 143.7 456 31.1
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 3.5e-32 143.7 470 28.5
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 3.5e-32 143.7 419 32.2
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 6.0e-32 142.9 470 29.8
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 7.8e-32 142.5 470 28.5
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.0e-31 142.1 278 38.5
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.0e-31 142.1 253 38.7
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.3e-31 141.7 262 38.5
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 1.7e-31 141.4 473 28.5
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 2.3e-31 141.0 257 35.4
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 5.1e-31 139.8 461 28.9
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 6.6e-31 139.4 376 28.5
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 8.7e-31 139.0 218 39.0
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 8.7e-31 139.0 487 29.2
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 8.7e-31 139.0 487 29.2
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 8.7e-31 139.0 392 30.1
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.1e-30 138.7 164 45.1
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.1e-30 138.7 252 38.9
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 1.1e-30 138.7 460 30.9
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.5e-30 138.3 468 27.8
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.5e-30 138.3 254 39.0
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 4.3e-30 136.7 463 28.9
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 4.3e-30 136.7 475 28.2
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 9.6e-30 135.6 372 30.1
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.3e-29 135.2 180 43.3
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 6.2e-29 132.9 375 29.1
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 6.2e-29 132.9 280 36.1
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 4.0e-28 130.2 263 35.7
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 6.9e-28 129.4 257 37.0
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 9.0e-28 129.0 475 28.4
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 2.0e-27 127.9 170 41.2
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 2.6e-27 127.5 458 26.9
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 5.8e-27 126.3 463 28.9
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.3e-26 125.2 476 29.8
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.1e-25 122.1 492 27.2
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 3.2e-25 120.6 432 28.7
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 4.2e-25 120.2 438 26.9
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 5.4e-25 119.8 253 34.0
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 7.1e-25 119.4 284 33.5
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 2.1e-24 117.9 273 33.0
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 5.1e-23 113.2 223 38.1
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 8.7e-23 112.5 236 36.4
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 1.5e-22 111.7 93 54.8
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.5e-22 111.7 232 33.6
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 1.5e-22 111.7 171 39.2
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 4.3e-22 110.2 127 44.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 4.8e-21 106.7 146 41.1
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 8.1e-21 105.9 182 39.0
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.1e-20 105.5 211 34.6
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 7.6e-19 99.4 186 33.9
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.4e-17 94.4 113 46.0
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 1.0e-15 89.0 259 32.0
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.8e-15 88.2 79 53.2
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 7.4e-14 82.8 211 36.5
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 9.6e-14 82.4 188 33.0
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 9.6e-14 82.4 188 33.0
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.6e-13 81.6 145 35.9
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.2e-11 75.5 84 48.8
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 1.1e-09 68.9 103 34.0
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.2e-09 67.0 58 51.7
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 3.5e-08 63.9 458 24.2
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 7.9e-08 62.8 56 50.0
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 7.9e-08 62.8 71 40.8


User provided reference genes

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