Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 9.5e-305 1049.3 498 100.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.6e-203 711.8 499 67.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.4e-199 699.1 500 66.8
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 2.5e-196 689.1 493 66.5
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 9.5e-196 687.2 498 65.3
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.8e-194 682.9 497 65.2
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 3.0e-194 682.2 497 64.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.0e-194 681.8 498 64.9
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.2e-194 681.4 497 65.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-193 679.5 497 65.0
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 9.8e-193 677.2 489 65.2
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.2e-192 676.0 497 64.2
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.9e-192 675.6 497 63.8
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 4.9e-192 674.9 497 65.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 6.3e-192 674.5 479 65.8
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 8.3e-192 674.1 500 64.6
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.4e-191 673.3 512 62.3
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.4e-191 672.5 492 65.2
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 5.4e-191 671.4 489 65.2
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 9.2e-191 670.6 489 65.2
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.2e-190 670.2 497 63.6
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 2.7e-190 669.1 504 64.3
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 4.6e-190 668.3 494 66.2
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 7.8e-190 667.5 497 63.0
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-189 666.8 489 64.6
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-189 666.8 489 64.6
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.7e-189 666.4 509 62.3
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.9e-189 665.6 496 64.7
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.9e-189 665.2 497 61.6
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.9e-189 665.2 490 65.1
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 8.6e-189 664.1 480 64.6
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.5e-188 663.3 497 65.2
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.5e-188 662.5 507 62.9
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.5e-188 662.5 490 64.9
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 9.5e-188 660.6 508 62.8
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 9.5e-188 660.6 492 62.8
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 9.5e-188 660.6 497 63.8
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 9.5e-188 660.6 498 62.2
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 4.7e-187 658.3 507 62.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.7e-187 658.3 501 63.3
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.2e-187 657.9 503 63.6
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.0e-187 657.5 495 63.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.0e-187 657.5 495 63.2
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.4e-186 656.8 507 62.7
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.4e-186 656.8 508 60.6
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.4e-186 656.8 497 61.8
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.8e-186 656.4 510 61.0
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.1e-186 655.6 497 61.8
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 4.0e-186 655.2 497 61.6
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.0e-186 655.2 497 61.8
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 4.0e-186 655.2 497 62.4
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 5.2e-186 654.8 498 63.7
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.2e-186 654.8 500 63.6
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 6.8e-186 654.4 494 62.1
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 8.9e-186 654.1 493 63.1
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 8.9e-186 654.1 508 60.6
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 8.9e-186 654.1 511 60.3
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 8.9e-186 654.1 508 60.6
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 8.9e-186 654.1 513 62.4
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.0e-185 652.9 497 63.0
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 4.4e-185 651.7 497 61.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 4.4e-185 651.7 497 61.4
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 9.8e-185 650.6 494 61.9
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.2e-184 649.4 513 61.4
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.2e-184 649.4 496 61.5
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.9e-184 649.0 497 61.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 8.3e-184 647.5 492 62.2
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.1e-183 647.1 497 61.4
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.1e-183 647.1 504 62.5
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.4e-183 646.7 512 60.7
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 2.4e-183 646.0 488 63.1
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.2e-183 645.6 504 62.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.2e-182 643.7 498 61.0
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.0e-181 638.3 542 57.7
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.5e-180 636.7 500 60.4
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.5e-180 636.0 512 60.0
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 6.2e-179 631.3 495 60.0
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.1e-178 630.6 496 60.1
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.4e-178 630.2 487 61.0
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.2e-177 627.1 583 54.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 2.6e-177 625.9 536 56.3
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 4.4e-177 625.2 454 65.0
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.3e-176 623.6 532 56.4
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.3e-176 623.6 483 60.0
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 5.4e-175 618.2 504 58.1
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 5.4e-175 618.2 517 57.1
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.5e-174 615.5 496 59.3
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.0e-173 614.0 517 57.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 2.6e-169 599.4 512 56.4
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.7e-168 596.7 492 59.8
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.2e-163 580.5 423 65.5
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.4e-162 577.0 489 57.1
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 4.4e-161 572.0 461 58.8
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.8e-161 571.6 353 74.5
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.9e-159 566.6 496 54.6
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.6e-158 562.0 497 54.1
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.5e-156 557.0 494 54.9
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.3e-156 555.4 474 56.1
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 5.6e-156 555.1 503 56.1
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 8.1e-155 551.2 497 56.3
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 2.2e-144 516.5 414 61.4
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 2.0e-137 493.4 483 52.4
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 4.2e-119 432.6 404 52.2
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 2.9e-112 409.8 376 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.1e-111 407.9 378 49.5
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 7.0e-106 388.7 343 53.1
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.1e-103 381.3 398 45.5
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.7e-102 376.7 271 63.5
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.3e-64 251.5 170 68.2
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 7.5e-60 235.7 165 63.0
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 8.6e-48 195.7 120 76.7
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.2e-35 154.5 112 64.3
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 6.4e-35 152.9 322 31.7
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 9.3e-26 122.5 98 57.1
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.2e-17 95.5 79 53.2
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.1e-13 82.4 56 64.3
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.5e-12 78.6 111 39.6
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.0e-11 75.9 66 48.5
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.0e-11 75.9 66 48.5
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 5.7e-07 60.1 113 27.4
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 9.7e-07 59.3 52 38.5


User provided reference genes

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