Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001821 Vanilla planifolia HOM05D026263 ORTHO05D007944 1.1e-59 233.0 109 100.0
Zm00001eb324500 Zea mays HOM05D026263 ORTHO05D007944 5.0e-17 91.3 61 67.2
Zm00001eb107100 Zea mays HOM05D026263 ORTHO05D007944 6.6e-17 90.9 61 63.9
Os07g0565800 Oryza sativa ssp. japonica HOM05D026263 ORTHO05D007944 1.6e-15 86.3 61 62.3
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 9.8e-13 77.0 105 45.7
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.4e-11 71.2 120 40.0
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.6e-10 69.7 128 39.1
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 2.0e-10 69.3 108 38.9
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 3.5e-10 68.6 118 41.5
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 6.0e-10 67.8 106 42.5
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.0e-09 67.0 113 42.5
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 1.7e-09 66.2 110 39.1
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 3.9e-09 65.1 75 50.7
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 8.6e-09 63.9 123 39.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 8.6e-09 63.9 120 40.0
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.1e-08 63.5 96 41.7
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.1e-08 63.5 91 42.9
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 1.1e-08 63.5 123 37.4
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.9e-08 62.8 120 34.2
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 2.5e-08 62.4 121 35.5
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 3.3e-08 62.0 129 34.1
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 4.3e-08 61.6 89 44.9
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 4.3e-08 61.6 114 38.6
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 4.3e-08 61.6 103 35.9
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 7.3e-08 60.8 99 38.4
MELO3C013561.2 Cucumis melo HOM05D006722 ORTHO05D007944 1.2e-07 60.1 67 50.7
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 1.2e-07 60.1 96 42.7
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 1.2e-07 60.1 147 34.0
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.6e-07 59.7 107 37.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.6e-07 59.7 75 40.0
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 2.8e-07 58.9 124 36.3
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 3.6e-07 58.5 92 39.1
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 4.7e-07 58.2 109 33.9
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 6.2e-07 57.8 60 48.3
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.1e-06 57.0 123 36.6
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.3e-06 55.8 114 36.0
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 2.3e-06 55.8 128 39.8
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 2.3e-06 55.8 103 35.0
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 3.1e-06 55.5 117 33.3
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 3.1e-06 55.5 97 38.1
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 4.0e-06 55.1 110 37.3
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 4.0e-06 55.1 97 38.1
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 5.2e-06 54.7 113 32.7
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 5.2e-06 54.7 118 37.3
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 5.2e-06 54.7 102 34.3
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 5.2e-06 54.7 92 41.3


User provided reference genes

Program Settings