Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 5.4e-125 451.1 235 100.0
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 2.6e-18 96.7 252 32.9
HPP92_014323 Vanilla planifolia HOM05D053846 ORTHO05D051553 6.4e-17 92.0 215 35.8
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 2.4e-16 90.1 233 33.0
HPP92_014329 Vanilla planifolia HOM05D053846 ORTHO05D051553 9.2e-16 88.2 229 34.9
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 3.5e-15 86.3 173 38.7
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 1.9e-13 80.5 95 51.6
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 4.3e-13 79.3 254 30.3
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 7.3e-13 78.6 239 31.8
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 7.3e-13 78.6 280 28.6
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 1.6e-12 77.4 229 31.0
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 1.6e-12 77.4 231 33.3
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 2.1e-12 77.0 87 51.7
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 2.8e-12 76.6 169 35.5
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 3.6e-12 76.3 235 30.6
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 4.7e-12 75.9 92 47.8
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 4.7e-12 75.9 162 37.7
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 6.2e-12 75.5 97 44.3
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 6.2e-12 75.5 93 45.2
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 8.0e-12 75.1 237 30.8
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.0e-11 74.7 254 29.9
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 1.0e-11 74.7 93 53.8
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 1.4e-11 74.3 79 48.1
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.4e-11 74.3 94 45.7
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 1.8e-11 73.9 101 42.6
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 1.8e-11 73.9 85 47.1
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 1.8e-11 73.9 96 47.9
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.3e-11 73.6 237 30.8
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.3e-11 73.6 272 32.4
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 2.3e-11 73.6 218 30.3
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 3.1e-11 73.2 90 45.6
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 3.1e-11 73.2 265 29.1
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 4.0e-11 72.8 91 47.3
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 5.2e-11 72.4 89 49.4
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 5.2e-11 72.4 219 31.1
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 5.2e-11 72.4 244 30.7
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 5.2e-11 72.4 77 54.5
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 5.2e-11 72.4 229 30.6
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 6.8e-11 72.0 242 33.1
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 6.8e-11 72.0 67 55.2
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 8.9e-11 71.6 257 30.4
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 8.9e-11 71.6 266 32.0
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 8.9e-11 71.6 134 36.6
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 1.2e-10 71.2 181 33.7
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 1.2e-10 71.2 66 56.1
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 1.2e-10 71.2 86 47.7
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.2e-10 71.2 263 28.9
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.5e-10 70.9 78 51.3
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.5e-10 70.9 72 50.0
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 1.5e-10 70.9 174 33.9
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 1.5e-10 70.9 76 50.0
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.0e-10 70.5 91 47.3
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 2.0e-10 70.5 104 40.4
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 2.0e-10 70.5 83 47.0
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 2.6e-10 70.1 227 28.6
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 2.6e-10 70.1 83 49.4
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 2.6e-10 70.1 244 28.3
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 2.6e-10 70.1 252 29.0
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 2.6e-10 70.1 215 32.1
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 3.4e-10 69.7 67 55.2
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 3.4e-10 69.7 68 52.9
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 3.4e-10 69.7 97 45.4
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 4.4e-10 69.3 166 33.1
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 4.4e-10 69.3 66 53.0
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 4.4e-10 69.3 182 32.4
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 4.4e-10 69.3 66 53.0
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 4.4e-10 69.3 182 32.4
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 4.4e-10 69.3 243 28.4
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 4.4e-10 69.3 69 52.2
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 4.4e-10 69.3 253 28.9
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 5.8e-10 68.9 65 53.8
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 5.8e-10 68.9 213 28.6
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 7.5e-10 68.6 167 32.9
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 7.5e-10 68.6 69 50.7
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 9.8e-10 68.2 80 48.8
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 9.8e-10 68.2 98 43.9
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 9.8e-10 68.2 77 51.9
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 9.8e-10 68.2 226 30.5
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.3e-09 67.8 239 28.9
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 1.7e-09 67.4 245 29.0
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.7e-09 67.4 98 43.9
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.7e-09 67.4 98 43.9
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 2.9e-09 66.6 90 42.2
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 2.9e-09 66.6 90 44.4
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 3.7e-09 66.2 270 24.8
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 3.7e-09 66.2 222 28.8
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 4.9e-09 65.9 64 53.1
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 4.9e-09 65.9 249 26.9
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 4.9e-09 65.9 235 27.2
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 6.4e-09 65.5 92 40.2
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 6.4e-09 65.5 58 60.3
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 6.4e-09 65.5 223 30.0
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 6.4e-09 65.5 262 28.2
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 8.3e-09 65.1 71 50.7
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 8.3e-09 65.1 62 56.5
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 1.1e-08 64.7 71 50.7
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 1.1e-08 64.7 240 28.3
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.1e-08 64.7 82 48.8
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 1.1e-08 64.7 106 39.6
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 1.4e-08 64.3 234 29.1
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.4e-08 64.3 221 29.9
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 1.9e-08 63.9 251 27.1
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 3.2e-08 63.2 69 50.7
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 4.1e-08 62.8 246 31.3
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 4.1e-08 62.8 159 31.4
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 5.4e-08 62.4 83 45.8
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 5.4e-08 62.4 268 29.9
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 7.0e-08 62.0 62 54.8
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 7.0e-08 62.0 67 52.2
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 9.2e-08 61.6 269 24.9
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 1.6e-07 60.8 98 40.8
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 1.6e-07 60.8 76 50.0
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 2.0e-07 60.5 62 54.8
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 2.0e-07 60.5 85 44.7
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 2.0e-07 60.5 83 47.0
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 3.5e-07 59.7 65 50.8
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 4.6e-07 59.3 85 45.9
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 6.0e-07 58.9 83 43.4
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 1.0e-06 58.2 86 46.5
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 2.3e-06 57.0 84 42.9
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 3.9e-06 56.2 240 27.5
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 3.9e-06 56.2 95 45.3
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 3.9e-06 56.2 213 31.0
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 5.0e-06 55.8 216 31.0


User provided reference genes

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