Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 2.2e-45 185.3 93 100.0
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 2.4e-36 155.2 87 88.5
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 3.2e-36 154.8 87 87.4
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 2.0e-35 152.1 90 81.1
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 3.5e-35 151.4 87 81.6
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 3.5e-35 151.4 88 83.0
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 6.0e-35 150.6 89 80.9
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 7.8e-35 150.2 88 84.1
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 1.7e-34 149.1 93 77.4
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 1.7e-34 149.1 93 77.4
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 2.3e-34 148.7 87 82.8
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 3.0e-34 148.3 92 80.4
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 3.9e-34 147.9 92 79.3
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 6.6e-34 147.1 90 81.1
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 8.6e-34 146.7 89 80.9
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 8.6e-34 146.7 87 83.9
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 8.6e-34 146.7 88 83.0
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 8.6e-34 146.7 85 83.5
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 1.5e-33 146.0 91 78.0
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 1.5e-33 146.0 90 81.1
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 1.9e-33 145.6 88 83.0
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 1.9e-33 145.6 92 78.3
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 1.9e-33 145.6 85 84.7
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 3.3e-33 144.8 92 76.1
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 3.3e-33 144.8 92 76.1
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 3.3e-33 144.8 92 76.1
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 3.3e-33 144.8 82 85.4
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 4.3e-33 144.4 89 80.9
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 4.3e-33 144.4 85 82.4
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 5.6e-33 144.1 81 86.4
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 7.3e-33 143.7 82 84.1
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 7.3e-33 143.7 86 80.2
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 7.3e-33 143.7 91 74.7
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 9.5e-33 143.3 91 78.0
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 9.5e-33 143.3 88 77.3
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 9.5e-33 143.3 88 77.3
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 1.2e-32 142.9 93 75.3
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 1.2e-32 142.9 87 82.8
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 1.2e-32 142.9 88 78.4
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 1.2e-32 142.9 93 78.5
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 1.6e-32 142.5 85 80.0
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 1.6e-32 142.5 85 82.4
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 1.6e-32 142.5 91 76.9
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 1.6e-32 142.5 82 82.9
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 2.1e-32 142.1 85 80.0
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 2.1e-32 142.1 91 76.9
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 2.8e-32 141.7 91 78.0
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 2.8e-32 141.7 84 83.3
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 2.8e-32 141.7 88 78.4
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 2.8e-32 141.7 88 78.4
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 2.8e-32 141.7 92 78.3
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 2.8e-32 141.7 91 75.8
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 3.6e-32 141.4 87 79.3
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 4.7e-32 141.0 82 82.9
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 4.7e-32 141.0 90 74.4
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 4.7e-32 141.0 78 85.9
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 6.2e-32 140.6 93 77.4
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 6.2e-32 140.6 92 79.3
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 6.2e-32 140.6 85 80.0
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 6.2e-32 140.6 85 80.0
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 6.2e-32 140.6 85 80.0
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 6.2e-32 140.6 85 80.0
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 6.2e-32 140.6 92 77.2
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 8.1e-32 140.2 82 81.7
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 8.1e-32 140.2 85 80.0
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 8.1e-32 140.2 88 77.3
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 8.1e-32 140.2 86 80.2
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 1.4e-31 139.4 92 76.1
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.4e-31 139.4 81 81.5
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 1.8e-31 139.0 89 78.7
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.8e-31 139.0 88 76.1
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 1.8e-31 139.0 87 77.0
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 2.3e-31 138.7 92 78.3
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 2.3e-31 138.7 92 77.2
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.1e-31 138.3 82 81.7
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 3.1e-31 138.3 82 80.5
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 3.1e-31 138.3 82 80.5
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 4.0e-31 137.9 88 78.4
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 4.0e-31 137.9 93 73.1
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 4.0e-31 137.9 87 79.3
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 8.9e-31 136.7 82 81.7
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 8.9e-31 136.7 82 79.3
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 1.2e-30 136.3 109 68.8
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 1.2e-30 136.3 92 72.8
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 1.2e-30 136.3 85 77.6
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 1.2e-30 136.3 80 81.2
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 1.5e-30 136.0 82 80.5
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 1.5e-30 136.0 92 71.7
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 80 83.8
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 91 75.8
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 1.5e-30 136.0 80 83.8
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 80 83.8
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 1.5e-30 136.0 80 83.8
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 2.0e-30 135.6 81 82.7
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 2.0e-30 135.6 78 82.1
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 2.6e-30 135.2 82 78.0
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.4e-30 134.8 91 75.8
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 4.4e-30 134.4 80 82.5
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 5.8e-30 134.0 87 75.9
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 5.8e-30 134.0 81 79.0
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 7.5e-30 133.7 85 77.6
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 1.7e-29 132.5 80 80.0
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 1.7e-29 132.5 93 74.2
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 2.2e-29 132.1 80 80.0
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 2.2e-29 132.1 80 80.0
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 4.9e-29 131.0 82 76.8
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 8.3e-29 130.2 119 59.7
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 1.1e-28 129.8 78 78.2
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 2.4e-28 128.6 92 69.6
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 3.5e-27 124.8 95 67.4
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 4.6e-27 124.4 79 72.2
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 1.3e-26 122.9 79 74.7
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 8.1e-24 113.6 131 51.1
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 8.1e-24 113.6 131 51.1
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 3.1e-23 111.7 68 79.4
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 3.7e-21 104.8 66 80.3
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 3.7e-21 104.8 62 82.3
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 7.3e-17 90.5 85 56.5
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 6.8e-15 84.0 56 71.4
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 6.8e-15 84.0 56 71.4
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 6.8e-15 84.0 56 71.4
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.5e-11 71.6 49 71.4
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 1.5e-09 66.2 42 78.6


User provided reference genes

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