Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001577 Vanilla planifolia HOM05D005424 ORTHO05D006726 0.0e+00 1315.8 678 100.0
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 2.9e-62 244.2 444 42.8
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.6e-60 238.4 382 43.2
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 3.5e-60 237.3 515 38.3
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 2.1e-57 228.0 505 38.0
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 2.8e-57 227.6 560 34.1
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 4.8e-57 226.9 434 42.9
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 2.6e-55 221.1 398 41.7
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 7.6e-55 219.5 477 39.4
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 2.9e-54 217.6 492 37.0
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 3.8e-54 217.2 489 38.9
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 1.9e-53 214.9 402 42.0
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 2.4e-53 214.5 488 36.9
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 3.2e-53 214.2 488 38.3
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 4.2e-53 213.8 541 35.3
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 5.5e-53 213.4 355 43.4
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 7.1e-53 213.0 471 38.9
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 3.5e-52 210.7 495 36.4
VMungo0720G0206 Vigna mungo HOM05D005424 ORTHO05D006726 4.6e-52 210.3 586 32.9
MSTRG.13701 Avicennia marina HOM05D005424 ORTHO05D006726 6.0e-52 209.9 435 38.6
Glyma.20G217700 Glycine max HOM05D005424 ORTHO05D006726 6.0e-52 209.9 506 36.8
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 7.9e-52 209.5 453 39.1
Glyma.10G172500 Glycine max HOM05D005424 ORTHO05D006726 1.0e-51 209.1 497 36.0
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 1.3e-51 208.8 456 39.9
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 1.8e-51 208.4 425 40.2
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 1.8e-51 208.4 474 39.5
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 3.0e-51 207.6 582 34.9
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 3.0e-51 207.6 393 39.9
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 5.1e-51 206.8 460 38.0
Medtr1g077940 Medicago truncatula HOM05D005424 ORTHO05D006726 5.1e-51 206.8 468 36.3
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 5.1e-51 206.8 411 40.9
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 6.7e-51 206.5 658 33.0
CsaV3_6G002490 Cucumis sativus L. HOM05D005424 ORTHO05D006726 8.7e-51 206.1 511 37.2
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 8.7e-51 206.1 606 34.5
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 8.7e-51 206.1 471 37.6
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 8.7e-51 206.1 504 36.7
SGA_v2.0_scaffold88G27243 Striga asiatica HOM05D005424 ORTHO05D006726 1.5e-50 205.3 580 34.7
MELO3C025037.2 Cucumis melo HOM05D005424 ORTHO05D006726 1.9e-50 204.9 590 34.6
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 1.9e-50 204.9 427 37.9
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 2.5e-50 204.5 591 33.8
Ca_09953_v3 Cicer arietinum L. HOM05D005424 ORTHO05D006726 7.4e-50 203.0 572 33.0
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 9.6e-50 202.6 579 34.5
Migut.E00727 Erythranthe guttata HOM05D005424 ORTHO05D006726 9.6e-50 202.6 493 36.7
EL10Ac5g12404 Beta vulgaris HOM05D005424 ORTHO05D006726 2.1e-49 201.4 501 36.7
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 2.1e-49 201.4 383 39.2
AUR62007075 Chenopodium quinoa HOM05D005424 ORTHO05D006726 2.8e-49 201.1 355 43.1
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 4.8e-49 200.3 499 35.1
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 6.2e-49 199.9 646 31.6
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 1.4e-48 198.7 444 36.5
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 1.8e-48 198.4 386 39.6
ClCG08G001970 Citrullus lanatus HOM05D005424 ORTHO05D006726 2.4e-48 198.0 529 35.5
THA.LOC104813063 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 4.0e-48 197.2 560 35.4
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 5.3e-48 196.8 533 34.7
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 6.9e-48 196.4 530 33.6
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 6.9e-48 196.4 522 35.1
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 9.0e-48 196.1 487 36.3
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 1.2e-47 195.7 516 33.1
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 1.5e-47 195.3 397 42.8
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 3.4e-47 194.1 536 34.0
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 4.5e-47 193.7 470 37.0
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 7.6e-47 193.0 413 39.0
ECA233G6131 Erigeron canadensis HOM05D005424 ORTHO05D006726 7.6e-47 193.0 416 37.7
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 1.3e-46 192.2 506 36.2
Hund11337 Selenicereus undatus HOM05D005424 ORTHO05D006726 1.3e-46 192.2 475 37.3
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 1.7e-46 191.8 496 34.3
Thhalv10006636m.g Eutrema salsugineum HOM05D005424 ORTHO05D006726 3.8e-46 190.7 346 41.9
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 3.8e-46 190.7 389 39.1
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 3.8e-46 190.7 515 35.7
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 2.5e-45 188.0 405 38.8
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 2.5e-45 188.0 429 37.8
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 4.2e-45 187.2 430 37.4
AUR62019939 Chenopodium quinoa HOM05D005424 ORTHO05D006726 5.5e-45 186.8 414 38.4
Lalb_Chr21g0311581 Lupinus albus HOM05D005424 ORTHO05D006726 7.1e-45 186.4 633 31.4
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.2e-44 185.7 554 31.9
Lalb_Chr21g0311601 Lupinus albus HOM05D005424 ORTHO05D006726 1.2e-44 185.7 632 31.8
HanXRQChr07g0192271 Helianthus annuus HOM05D005424 ORTHO05D006726 1.8e-43 181.8 645 31.0
Sp1g28160 Schrenkiella parvula HOM05D005424 ORTHO05D006726 2.3e-43 181.4 551 32.1
Carub.0001s3113 Capsella rubella HOM05D005424 ORTHO05D006726 3.0e-43 181.0 331 41.4
Oeu010728.1 Olea europaea HOM05D005424 ORTHO05D006726 3.0e-43 181.0 336 42.0
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 3.9e-43 180.6 442 35.7
Phvul.L004801 Phaseolus vulgaris HOM05D005424 ORTHO05D006726 5.1e-43 180.3 614 32.1
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 6.7e-43 179.9 349 38.1
AL1G47110 Arabidopsis lyrata HOM05D005424 ORTHO05D006726 4.3e-42 177.2 544 33.1
Ah.07g198200 Amaranthus hybridus HOM05D005424 ORTHO05D006726 7.4e-42 176.4 385 37.4
Lsat_1_v5_gn_6_11441 Lactuca sativa HOM05D005424 ORTHO05D006726 3.7e-41 174.1 685 29.6
CARHR032180 Cardamine hirsuta HOM05D005424 ORTHO05D006726 6.3e-41 173.3 392 37.5
Sed0006250 Sechium edule HOM05D005424 ORTHO05D006726 8.2e-41 172.9 457 34.8
Aa31LG6G7470 Aethionema arabicum HOM05D005424 ORTHO05D006726 5.3e-40 170.2 493 32.7
BcaB04g17977 Brassica carinata HOM05D005424 ORTHO05D006726 2.0e-39 168.3 577 31.4
unitig_699.g19549 Utricularia gibba HOM05D005424 ORTHO05D006726 2.6e-39 167.9 426 35.2
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.0e-38 166.0 351 37.0
CDE11G1187 Ceratophyllum demersum HOM05D005424 ORTHO05D006726 1.0e-38 166.0 437 34.6
AT1G32810 Arabidopsis thaliana HOM05D005424 ORTHO05D006726 1.7e-38 165.2 524 30.7
BraA08t32921Z Brassica rapa HOM05D005424 ORTHO05D006726 2.2e-38 164.9 238 45.0
DCAR_019998 Daucus carota HOM05D005424 ORTHO05D006726 1.9e-37 161.8 277 42.6
BcaC07g37610 Brassica carinata HOM05D005424 ORTHO05D006726 3.2e-37 161.0 306 39.9
BolC8t47971H Brassica oleracea HOM05D005424 ORTHO05D006726 3.2e-37 161.0 306 39.9
A08p09200 Brassica napus HOM05D005424 ORTHO05D006726 7.2e-37 159.8 321 39.3
Ah.12g053330 Amaranthus hybridus HOM05D001091 ORTHO05D001020 1.2e-36 159.1 415 34.5
Os04g0221600 Oryza sativa ssp. japonica HOM05D005424 ORTHO05D006726 7.9e-36 156.4 476 30.0
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 2.5e-34 151.4 323 35.9
SHI06919 Sapria himalayana HOM05D005424 ORTHO05D006726 1.4e-32 145.6 271 41.3
Mapoly0057s0069 Marchantia polymorpha HOM05D005424 ORTHO05D006726 2.2e-30 138.3 383 34.7
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 5.5e-29 133.7 203 41.9
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 7.4e-26 123.2 525 30.1
Oeu038526.1 Olea europaea HOM05D000700 ORTHO05D000397 6.5e-22 110.2 245 37.1
ATR0078G022 Amborella trichopoda HOM05D005424 ORTHO05D006726 2.8e-17 94.7 422 27.0
SEGI_29779 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 7.0e-16 90.1 93 46.2
TPR.G34808 Trifolium pratense HOM05D005424 ORTHO05D006726 1.5e-13 82.4 151 42.4
PGSC0003DMG402012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 2.5e-13 81.6 430 28.6
TPR.G34809 Trifolium pratense HOM05D005424 ORTHO05D006726 7.2e-13 80.1 290 33.1


User provided reference genes

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