Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 3.0e-309 1064.3 518 100.0
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 4.5e-241 837.8 524 76.7
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.0e-237 824.7 516 76.9
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.7e-232 809.3 516 75.0
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 3.8e-232 808.1 516 75.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 8.5e-232 807.0 516 75.8
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.5e-231 806.2 516 74.4
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.5e-231 806.2 516 75.2
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 3.2e-231 805.1 516 74.4
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 9.4e-231 803.5 516 74.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.6e-230 802.7 513 74.9
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.7e-230 802.0 516 74.4
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 6.1e-230 800.8 516 75.0
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 8.0e-230 800.4 516 73.8
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 8.0e-230 800.4 516 73.8
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 8.0e-230 800.4 516 74.0
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.0e-229 800.0 515 74.8
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.0e-229 798.1 515 74.4
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 6.8e-229 797.3 516 74.6
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.5e-228 796.2 516 73.8
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 2.0e-228 795.8 516 75.6
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 2.0e-228 795.8 516 74.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 3.4e-228 795.0 513 74.5
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 3.4e-228 795.0 512 74.2
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 5.7e-228 794.3 516 74.0
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 7.5e-228 793.9 516 73.6
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 7.5e-228 793.9 516 73.8
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 9.8e-228 793.5 516 73.3
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 9.8e-228 793.5 512 74.0
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.8e-227 791.2 516 73.4
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 4.8e-227 791.2 516 73.4
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 1.1e-226 790.0 516 72.9
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.8e-226 789.3 518 73.6
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 1.8e-226 789.3 468 80.6
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 3.1e-226 788.5 516 74.2
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.1e-226 788.1 511 73.6
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 7.0e-226 787.3 513 73.7
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 7.0e-226 787.3 517 73.5
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 9.1e-226 786.9 512 73.6
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.2e-225 786.6 518 73.0
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-225 785.8 518 73.0
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.5e-225 785.0 518 73.2
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.5e-225 784.6 518 73.0
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.7e-225 783.9 540 70.9
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.0e-224 783.5 526 72.1
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.0e-224 783.5 518 73.6
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.7e-224 782.7 542 70.1
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.7e-224 782.7 514 73.2
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 2.9e-224 781.9 517 73.1
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 3.8e-224 781.6 516 72.9
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 5.0e-224 781.2 516 72.3
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.5e-224 780.4 516 71.9
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 8.5e-224 780.4 516 73.4
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 8.5e-224 780.4 516 72.9
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.1e-223 780.0 508 74.0
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.9e-223 779.2 514 71.6
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.9e-223 779.2 516 73.4
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.2e-223 778.1 517 72.0
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 5.5e-223 777.7 519 73.4
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 7.2e-223 777.3 517 72.3
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 7.2e-223 777.3 516 72.3
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 9.4e-223 776.9 517 72.0
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 9.4e-223 776.9 516 73.3
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 1.2e-222 776.5 516 71.9
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.6e-222 776.2 517 72.3
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.1e-222 775.8 517 71.2
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 2.7e-222 775.4 517 71.2
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.7e-222 775.4 511 72.8
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 3.6e-222 775.0 516 71.9
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 4.7e-222 774.6 517 71.0
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 8.0e-222 773.9 506 72.1
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 1.0e-221 773.5 517 71.2
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 1.0e-221 773.5 517 71.2
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 1.0e-221 773.5 506 71.9
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.4e-221 773.1 517 72.1
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 1.8e-221 772.7 519 72.4
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 3.0e-221 771.9 517 70.8
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 3.0e-221 771.9 519 71.5
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 4.0e-221 771.5 517 70.8
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 5.2e-221 771.2 521 72.7
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 8.8e-221 770.4 517 71.0
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.5e-220 769.6 516 71.5
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.5e-220 769.6 517 72.1
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.6e-220 768.8 550 68.9
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 3.4e-220 768.5 514 71.2
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 3.4e-220 768.5 514 71.2
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 9.8e-220 766.9 481 75.7
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.7e-219 766.1 514 71.4
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.7e-219 766.1 515 71.3
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.7e-219 766.1 516 71.9
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 2.8e-219 765.4 514 70.8
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 3.7e-219 765.0 526 71.5
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 6.3e-219 764.2 516 71.7
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 1.1e-218 763.5 516 71.5
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 4.1e-218 761.5 514 71.0
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 5.4e-218 761.1 514 71.0
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 7.0e-218 760.8 516 71.1
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 1.2e-217 760.0 514 71.0
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 1.2e-217 760.0 514 71.0
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.0e-217 759.2 518 70.5
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 3.5e-217 758.4 514 72.4
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 5.9e-217 757.7 516 70.5
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.3e-216 755.7 517 72.0
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 2.9e-216 755.4 516 70.9
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.9e-215 752.7 472 76.5
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 2.8e-214 748.8 491 73.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 3.0e-213 745.3 516 70.2
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 8.9e-213 743.8 522 69.7
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 3.4e-212 741.9 522 69.5
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 9.8e-212 740.3 462 76.0
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 2.2e-211 739.2 462 76.8
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 3.7e-211 738.4 470 74.5
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 1.2e-209 733.4 475 72.8
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 2.0e-209 732.6 522 69.3
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 4.6e-209 731.5 462 75.5
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 5.9e-209 731.1 522 68.2
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 1.3e-208 729.9 511 70.3
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.3e-208 729.2 510 69.6
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.5e-207 726.5 481 74.0
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 3.3e-207 725.3 546 67.2
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.6e-206 721.8 516 69.2
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.0e-205 720.3 551 66.2
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.4e-205 719.9 519 67.6
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.8e-205 719.5 516 68.2
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 5.2e-205 718.0 516 68.2
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 2.6e-204 715.7 519 69.0
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 3.4e-204 715.3 516 66.9
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 9.8e-204 713.8 519 68.8
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 4.1e-202 708.4 516 67.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 5.4e-202 708.0 517 67.1
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 5.4e-202 708.0 516 67.2
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 3.9e-200 701.8 516 66.9
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.5e-199 699.1 515 67.2
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 9.8e-196 687.2 556 63.1
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.2e-195 686.0 571 61.5
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.1e-194 681.8 515 66.4
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 2.5e-191 672.5 517 65.6
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.6e-190 668.7 536 62.9
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 8.6e-184 647.5 521 64.1
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 9.6e-183 644.0 516 62.8
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 5.6e-175 618.2 503 64.4
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 9.6e-175 617.5 363 81.3
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.2e-172 610.5 373 76.9
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 1.5e-172 610.1 474 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 3.4e-172 609.0 474 60.8
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.3e-166 590.5 446 61.9
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 8.1e-166 587.8 478 61.7
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 1.2e-164 583.9 380 73.7
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 8.7e-160 567.8 557 54.9
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.2e-153 547.4 498 55.0
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 1.9e-151 540.0 473 55.6
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.1e-133 481.1 295 79.0
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 1.6e-129 467.2 345 66.1
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.4e-125 453.4 265 79.6
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.8e-120 437.2 290 73.8
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.7e-113 412.5 289 68.2
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 8.0e-113 411.8 283 71.7
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 2.2e-110 403.7 285 68.8
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.3e-104 383.6 250 72.4
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 1.2e-81 308.1 242 63.2
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.9e-70 270.4 204 65.7
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 6.4e-62 242.7 504 34.3
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 3.3e-50 203.8 495 30.7
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 2.2e-46 191.0 132 67.4
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 5.1e-35 153.3 137 52.6
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.5e-31 141.7 202 41.6
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 5.5e-29 133.3 109 57.8
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 2.5e-21 107.8 59 84.7
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 7.2e-21 106.3 82 64.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 4.7e-20 103.6 60 80.0
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.0e-19 100.9 142 46.5
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 1.5e-18 98.6 158 36.7
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.7e-10 70.1 165 37.0
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 3.8e-06 57.4 87 43.7


User provided reference genes

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