Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 3.1e-54 214.9 112 100.0
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 6.5e-20 100.9 91 61.5
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 1.5e-19 99.8 101 58.4
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.5e-19 99.8 97 59.8
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.9e-19 99.4 101 57.4
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 5.5e-19 97.8 109 55.0
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 5.5e-19 97.8 90 63.3
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 7.2e-19 97.4 89 60.7
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 7.2e-19 97.4 90 60.0
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 2.1e-18 95.9 99 57.6
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 2.1e-18 95.9 90 62.2
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.7e-18 95.5 100 56.0
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 4.7e-18 94.7 71 63.4
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 4.7e-18 94.7 99 55.6
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 4.7e-18 94.7 101 57.4
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 1.0e-17 93.6 89 58.4
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 2.3e-17 92.4 89 61.8
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 2.3e-17 92.4 100 57.0
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 4.0e-17 91.7 101 54.5
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 4.0e-17 91.7 101 54.5
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 6.7e-17 90.9 99 55.6
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 6.7e-17 90.9 103 53.4
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 8.8e-17 90.5 90 56.7
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 8.8e-17 90.5 90 56.7
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 8.8e-17 90.5 90 56.7
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 1.5e-16 89.7 96 56.2
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.0e-16 89.4 90 55.6
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.0e-16 89.4 90 55.6
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.0e-16 89.4 90 55.6
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 2.0e-16 89.4 88 58.0
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 2.6e-16 89.0 93 58.1
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 3.3e-16 88.6 105 56.2
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 3.3e-16 88.6 98 56.1
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 4.4e-16 88.2 89 60.7
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 7.5e-16 87.4 99 55.6
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 7.5e-16 87.4 85 61.2
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 7.5e-16 87.4 90 57.8
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 7.5e-16 87.4 90 57.8
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 9.7e-16 87.0 102 53.9
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 1.3e-15 86.7 96 55.2
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 2.2e-15 85.9 110 52.7
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 2.8e-15 85.5 101 53.5
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.8e-15 85.5 90 54.4
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 3.7e-15 85.1 69 58.0
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 3.7e-15 85.1 90 54.4
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 4.8e-15 84.7 94 57.4
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 4.8e-15 84.7 89 56.2
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 3.1e-14 82.0 91 56.0
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 4.1e-14 81.6 89 52.8
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 4.1e-14 81.6 89 58.4
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 7.0e-14 80.9 88 54.5
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.2e-13 80.1 102 52.0
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.2e-13 80.1 102 52.0
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 1.6e-13 79.7 101 48.5
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 1.6e-13 79.7 91 54.9
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 2.0e-13 79.3 91 47.3
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 2.7e-13 79.0 91 49.5
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 3.5e-13 78.6 62 62.9
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 5.9e-13 77.8 108 44.4
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 5.9e-13 77.8 54 66.7
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 7.7e-13 77.4 101 47.5
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 7.7e-13 77.4 106 49.1
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 1.3e-12 76.6 98 52.0
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 2.2e-12 75.9 89 52.8
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 2.2e-12 75.9 103 46.6
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 2.2e-12 75.9 98 51.0
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 3.8e-12 75.1 90 48.9
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 6.5e-12 74.3 90 50.0
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 6.5e-12 74.3 95 46.3
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 8.5e-12 73.9 108 47.2
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.1e-11 73.6 94 46.8
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 1.9e-11 72.8 91 49.5
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 1.9e-11 72.8 91 49.5
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 3.2e-11 72.0 90 50.0
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 3.2e-11 72.0 89 48.3
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 5.5e-11 71.2 90 47.8
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 5.5e-11 71.2 90 50.0
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 7.2e-11 70.9 87 51.7
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 7.2e-11 70.9 89 48.3
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 7.2e-11 70.9 90 48.9
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 1.2e-10 70.1 90 47.8
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 1.6e-10 69.7 89 49.4
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 2.1e-10 69.3 87 50.6
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 2.1e-10 69.3 87 50.6
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 2.7e-10 68.9 57 59.6
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 4.7e-10 68.2 90 44.4
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 4.7e-10 68.2 100 44.0
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 8.0e-10 67.4 53 60.4
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 8.0e-10 67.4 123 41.5
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 1.4e-09 66.6 90 47.8
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 1.8e-09 66.2 85 49.4
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 6.8e-09 64.3 65 49.2
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 8.8e-09 63.9 92 48.9
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 1.2e-08 63.5 102 44.1
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 3.4e-08 62.0 111 40.5
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 3.4e-08 62.0 109 38.5
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 1.3e-07 60.1 103 42.7
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 8.3e-07 57.4 91 44.0
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 3.1e-06 55.5 32 75.0
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 4.1e-06 55.1 41 58.5


User provided reference genes

Program Settings