Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001500 Vanilla planifolia HOM05D000108 ORTHO05D427756 3.3e-40 167.9 85 100.0
HPP92_001353 Vanilla planifolia HOM05D000108 ORTHO05D001149 1.2e-13 79.7 47 87.2
TAR633G1860 Trochodendron aralioides HOM05D000108 ORTHO05D001149 2.2e-12 75.5 70 57.1
PSO384G2763 Papaver somniferum HOM05D000108 ORTHO05D001149 1.1e-11 73.2 70 52.9
TWI31G0805 Tripterygium wilfordii HOM05D000108 ORTHO05D001149 1.1e-11 73.2 70 57.1
Sed0002914 Sechium edule HOM05D000108 ORTHO05D001149 1.4e-11 72.8 66 57.6
MBI14_g42160_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001149 1.9e-11 72.4 70 54.3
Cpa.g.sc139.8 Carica papaya HOM05D000108 ORTHO05D001149 2.5e-11 72.0 66 56.1
CiPaw.13G102700 Carya illinoinensis HOM05D000108 ORTHO05D001149 3.2e-11 71.6 70 52.9
PSO339G0953 Papaver somniferum HOM05D000108 ORTHO05D001149 3.2e-11 71.6 70 51.4
QL01p035162 Quercus lobata HOM05D000108 ORTHO05D001149 3.2e-11 71.6 70 52.9
Sed0013938 Sechium edule HOM05D000108 ORTHO05D001149 4.2e-11 71.2 66 56.1
GSVIVG01025071001 Vitis vinifera HOM05D000108 ORTHO05D001149 4.2e-11 71.2 70 55.7
Dinv35678 Davidia involucrata HOM05D000108 ORTHO05D001149 7.2e-11 70.5 78 48.7
TAR636G0183 Trochodendron aralioides HOM05D000108 ORTHO05D001149 7.2e-11 70.5 70 52.9
Os05g0117798 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D001149 9.4e-11 70.1 74 50.0
Duzib170G0496 Durio zibethinus HOM05D000108 ORTHO05D001149 1.2e-10 69.7 74 51.4
Zm00001eb265660 Zea mays HOM05D000108 ORTHO05D001149 1.2e-10 69.7 74 48.6
Ciclev10027728m.g Citrus clementina HOM05D000108 ORTHO05D001149 1.6e-10 69.3 70 51.4
AUR62001858 Chenopodium quinoa HOM05D000108 ORTHO05D001149 2.7e-10 68.6 66 51.5
AUR62009653 Chenopodium quinoa HOM05D000108 ORTHO05D001149 2.7e-10 68.6 66 51.5
Gohir.A03G036500 Gossypium hirsutum HOM05D000108 ORTHO05D001149 2.7e-10 68.6 74 51.4
Gohir.D03G131700 Gossypium hirsutum HOM05D000108 ORTHO05D001149 2.7e-10 68.6 74 51.4
Lalb_Chr22g0350061 Lupinus albus HOM05D000108 ORTHO05D001149 2.7e-10 68.6 75 46.7
Nn2g12816 Nelumbo nucifera HOM05D000108 ORTHO05D001149 2.7e-10 68.6 74 48.6
Sabra16G0140000 Salix brachista HOM05D000108 ORTHO05D001149 2.7e-10 68.6 75 49.3
HPP92_000644 Vanilla planifolia HOM05D000108 ORTHO05D001149 2.7e-10 68.6 74 50.0
HPP92_000702 Vanilla planifolia HOM05D000108 ORTHO05D001149 2.7e-10 68.6 74 50.0
Duzib150G0072 Durio zibethinus HOM05D000108 ORTHO05D001149 3.6e-10 68.2 65 52.3
Duzib168G1926 Durio zibethinus HOM05D000108 ORTHO05D001149 3.6e-10 68.2 65 53.8
Potri.009G026000 Populus trichocarpa HOM05D000108 ORTHO05D001149 3.6e-10 68.2 75 49.3
SalBow3G2091 Salvia bowleyana HOM05D000108 ORTHO05D001149 3.6e-10 68.2 70 50.0
Ah.08g215030 Amaranthus hybridus HOM05D000108 ORTHO05D001149 4.6e-10 67.8 66 48.5
MELO3C020688.2 Cucumis melo HOM05D000108 ORTHO05D001149 4.6e-10 67.8 66 54.5
Glyma.13G330600 Glycine max HOM05D000108 ORTHO05D001149 4.6e-10 67.8 71 49.3
FvH4_3g34440 Fragaria vesca HOM05D000108 ORTHO05D001149 6.1e-10 67.4 70 51.4
FAN11G1183 Fragaria x ananassa HOM05D000108 ORTHO05D001149 6.1e-10 67.4 70 51.4
Gorai.003G138600 Gossypium raimondii HOM05D000108 ORTHO05D001149 6.1e-10 67.4 74 51.4
Atru.chr3.3778 Acer truncatum HOM05D000108 ORTHO05D001149 7.9e-10 67.0 74 48.6
FAN16G0704 Fragaria x ananassa HOM05D000108 ORTHO05D001149 1.0e-09 66.6 70 51.4
FAN21G0560 Fragaria x ananassa HOM05D000108 ORTHO05D001149 1.0e-09 66.6 70 51.4
FAN25G2360 Fragaria x ananassa HOM05D000108 ORTHO05D001149 1.0e-09 66.6 70 51.4
Glyma.15G043400 Glycine max HOM05D000108 ORTHO05D001149 1.0e-09 66.6 71 47.9
TWI79G1415 Tripterygium wilfordii HOM05D000108 ORTHO05D001149 1.0e-09 66.6 70 52.9
RcHm_v2.0_Chr5g0062081 Rosa chinensis HOM05D000108 ORTHO05D001149 1.4e-09 66.2 70 51.4
Thecc.09G332700 Theobroma cacao HOM05D000108 ORTHO05D001149 1.4e-09 66.2 65 52.3
vmacro03137 Vaccinium macrocarpon HOM05D000108 ORTHO05D001149 1.4e-09 66.2 70 50.0
VMungo1080G1229 Vigna mungo HOM05D000108 ORTHO05D001149 1.4e-09 66.2 71 47.9
arahy.Tifrunner.gnm1.ann1.2070QL Arachis hypogaea HOM05D000108 ORTHO05D001149 1.8e-09 65.9 74 44.6
ClCG03G001810 Citrullus lanatus HOM05D000108 ORTHO05D001149 1.8e-09 65.9 66 53.0
Haze_23988 Corylus avellana HOM05D000108 ORTHO05D001149 1.8e-09 65.9 70 50.0
Haze_23992 Corylus avellana HOM05D000108 ORTHO05D001149 1.8e-09 65.9 70 50.0
Manes.04G028300 Manihot esculenta HOM05D000108 ORTHO05D001149 1.8e-09 65.9 70 51.4
Sc12g0001870 Simmondsia chinensis HOM05D000108 ORTHO05D001149 1.8e-09 65.9 74 47.3
Sc21g0005340 Simmondsia chinensis HOM05D000108 ORTHO05D001149 1.8e-09 65.9 74 45.9
Cfa011412 Carpinus fangiana HOM05D000108 ORTHO05D001149 2.3e-09 65.5 70 48.6
MD11G1118200 Malus domestica HOM05D000108 ORTHO05D001149 2.3e-09 65.5 70 50.0
EL10Ac7g15934 Beta vulgaris HOM05D000108 ORTHO05D001149 3.0e-09 65.1 66 45.5
CsaV3_1G033760 Cucumis sativus L. HOM05D000108 ORTHO05D001149 3.9e-09 64.7 66 53.0
Lj3g0021793 Lotus japonicus HOM05D000108 ORTHO05D001149 3.9e-09 64.7 71 46.5
Phvul.L002157 Phaseolus vulgaris HOM05D000108 ORTHO05D001149 3.9e-09 64.7 71 46.5
PGR119G0104 Punica granatum HOM05D000108 ORTHO05D001149 3.9e-09 64.7 74 44.6
CSS0041728 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001149 6.7e-09 63.9 70 48.6
COL.COLO4_18411 Corchorus olitorius HOM05D000108 ORTHO05D001149 6.7e-09 63.9 65 52.3
Gohir.A05G099500 Gossypium hirsutum HOM05D000108 ORTHO05D001149 6.7e-09 63.9 65 50.8
Gohir.D05G099400 Gossypium hirsutum HOM05D000108 ORTHO05D001149 6.7e-09 63.9 65 50.8
Gorai.009G103300 Gossypium raimondii HOM05D000108 ORTHO05D001149 6.7e-09 63.9 65 50.8
Medtr2g096010 Medicago truncatula HOM05D000108 ORTHO05D001149 8.8e-09 63.5 75 45.3
Potri.001G233700 Populus trichocarpa HOM05D000108 ORTHO05D001149 8.8e-09 63.5 75 46.7
Rhsim13G0089400 Rhododendron simsii HOM05D000108 ORTHO05D001149 8.8e-09 63.5 70 48.6
HPP92_001364 Vanilla planifolia HOM05D000108 ORTHO05D001149 8.8e-09 63.5 34 91.2
arahy.Tifrunner.gnm1.ann1.CITF9E Arachis hypogaea HOM05D000108 ORTHO05D001149 1.1e-08 63.2 74 43.2
Lalb_Chr14g0374921 Lupinus albus HOM05D000108 ORTHO05D001149 1.1e-08 63.2 70 45.7
THA.LOC104799469 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 1.1e-08 63.2 70 50.0
CANSAT54G1698 Cannabis sativa HOM05D000108 ORTHO05D001149 1.5e-08 62.8 74 44.6
Cc01_g12000 Coffea canephora HOM05D000108 ORTHO05D001149 1.5e-08 62.8 70 47.1
Lalb_Chr19g0137571 Lupinus albus HOM05D000108 ORTHO05D001149 1.5e-08 62.8 93 36.6
arahy.Tifrunner.gnm1.ann1.QN0DU3 Arachis hypogaea HOM05D000108 ORTHO05D001149 1.9e-08 62.4 70 45.7
Migut.N02645 Erythranthe guttata HOM05D000108 ORTHO05D001149 1.9e-08 62.4 70 44.3
Glyma.11G147108 Glycine max HOM05D000108 ORTHO05D001149 1.9e-08 62.4 74 43.2
Oeu062312.1 Olea europaea HOM05D000108 ORTHO05D001149 1.9e-08 62.4 74 45.9
Psat5g281840 Pisum sativum HOM05D000108 ORTHO05D001149 1.9e-08 62.4 75 44.0
Prupe.6G088500 Prunus persica HOM05D000108 ORTHO05D001149 1.9e-08 62.4 70 48.6
Hund05022 Selenicereus undatus HOM05D000108 ORTHO05D001149 1.9e-08 62.4 66 45.5
Actinidia37269 Actinidia chinensis HOM05D000108 ORTHO05D001149 3.3e-08 61.6 70 48.6
Aqoxy4G03111 Aquilegia oxysepala HOM05D000108 ORTHO05D001149 3.3e-08 61.6 66 48.5
Dinv02790 Davidia involucrata HOM05D000108 ORTHO05D001149 3.3e-08 61.6 70 47.1
FAN25G0698 Fragaria x ananassa HOM05D000108 ORTHO05D011597 3.3e-08 61.6 66 51.5
HanXRQChr04g0110361 Helianthus annuus HOM05D000108 ORTHO05D001149 3.3e-08 61.6 70 44.3
Phvul.011G070000 Phaseolus vulgaris HOM05D000108 ORTHO05D001149 3.3e-08 61.6 74 41.9
Actinidia07086 Actinidia chinensis HOM05D000108 ORTHO05D001149 4.3e-08 61.2 66 48.5
THA.LOC104826348 Tarenaya hassleriana HOM05D000108 ORTHO05D001149 4.3e-08 61.2 92 37.0
VMungo1127G1903 Vigna mungo HOM05D000108 ORTHO05D001149 4.3e-08 61.2 74 41.9
ATR0594G216 Amborella trichopoda HOM05D000108 ORTHO05D001149 5.7e-08 60.8 66 53.0
Oeu041005.1 Olea europaea HOM05D000108 ORTHO05D001149 5.7e-08 60.8 60 50.0
TPR.G11605 Trifolium pratense HOM05D000108 ORTHO05D001149 5.7e-08 60.8 75 42.7
Lsat_1_v5_gn_5_166981 Lactuca sativa HOM05D000108 ORTHO05D001149 7.4e-08 60.5 70 44.3
Aa31LG4G15070 Aethionema arabicum HOM05D000108 ORTHO05D001149 1.7e-07 59.3 74 44.6
CDE02G1599 Ceratophyllum demersum HOM05D000108 ORTHO05D001149 1.7e-07 59.3 70 48.6
Nn2g10569 Nelumbo nucifera HOM05D000108 ORTHO05D001149 1.7e-07 59.3 70 45.7
Psat3g207600 Pisum sativum HOM05D000032 ORTHO05D001837 1.7e-07 59.3 60 48.3
CDE09G0015 Ceratophyllum demersum HOM05D000108 ORTHO05D001149 2.2e-07 58.9 70 48.6
Manes.11G137400 Manihot esculenta HOM05D000108 ORTHO05D001149 2.2e-07 58.9 70 45.7
SGA_v2.0_scaffold104G30113 Striga asiatica HOM05D000108 ORTHO05D001149 2.2e-07 58.9 70 44.3
ECA248G0078 Erigeron canadensis HOM05D000108 ORTHO05D001149 4.8e-07 57.8 60 46.7
ECA248G3318 Erigeron canadensis HOM05D000108 ORTHO05D001149 4.8e-07 57.8 60 46.7
Glyma.12G074300 Glycine max HOM05D000108 ORTHO05D001149 4.8e-07 57.8 74 41.9
Sp5g15680 Schrenkiella parvula HOM05D000108 ORTHO05D001149 4.8e-07 57.8 70 44.3
AT2G28620 Arabidopsis thaliana HOM05D000108 ORTHO05D001149 6.3e-07 57.4 92 33.7
Eucgr.B02433 Eucalyptus grandis HOM05D000108 ORTHO05D001149 6.3e-07 57.4 66 47.0
Nitab4.5_0003784g0020 Nicotiana tabacum HOM05D000108 ORTHO05D001149 6.3e-07 57.4 70 42.9
PGSC0003DMG400015544 Solanum tuberosum HOM05D000108 ORTHO05D001149 6.3e-07 57.4 70 41.4
MSTRG.17848 Avicennia marina HOM05D000108 ORTHO05D001149 8.2e-07 57.0 74 37.8
HanXRQChr05g0133911 Helianthus annuus HOM05D000108 ORTHO05D001149 8.2e-07 57.0 70 42.9
MD03G1105800 Malus domestica HOM05D000108 ORTHO05D001149 8.2e-07 57.0 70 47.1
unitig_0.g1033 Utricularia gibba HOM05D000108 ORTHO05D001149 8.2e-07 57.0 70 40.0
AL5G24530 Arabidopsis lyrata HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
BcaC09g49719 Brassica carinata HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
A01p26440 Brassica napus HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
C01p33640 Brassica napus HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
BolC1t03310H Brassica oleracea HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
BraA01t02568Z Brassica rapa HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
CSS0050333 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 42.9
CARHR154150 Cardamine hirsuta HOM05D000108 ORTHO05D001149 1.1e-06 56.6 74 41.9
Nitab4.5_0002380g0100 Nicotiana tabacum HOM05D000108 ORTHO05D001149 1.1e-06 56.6 70 41.4
BcaB05g23477 Brassica carinata HOM05D000108 ORTHO05D001149 1.4e-06 56.2 66 43.9
Carub.0004s0959 Capsella rubella HOM05D000108 ORTHO05D001149 1.4e-06 56.2 74 37.8
Carub.0005s1169 Capsella rubella HOM05D000108 ORTHO05D001149 1.4e-06 56.2 70 42.9
Thhalv10002384m.g Eutrema salsugineum HOM05D000108 ORTHO05D001149 1.4e-06 56.2 70 42.9
Oeu058513.1 Olea europaea HOM05D000108 ORTHO05D001149 1.4e-06 56.2 70 41.4
Peaxi162Scf00836g00218 Petunia axillaris HOM05D000108 ORTHO05D001149 1.8e-06 55.8 74 39.2
AT3G45850 Arabidopsis thaliana HOM05D000108 ORTHO05D001149 5.3e-06 54.3 70 40.0
BcaC02g08155 Brassica carinata HOM05D000108 ORTHO05D001149 5.3e-06 54.3 74 37.8
C04p57810 Brassica napus HOM05D000108 ORTHO05D001149 5.3e-06 54.3 74 37.8
SHI05982 Sapria himalayana HOM05D000108 ORTHO05D001149 9.1e-06 53.5 56 50.0
HPP92_000239 Vanilla planifolia HOM05D000108 ORTHO05D427609 9.1e-06 53.5 28 92.9


User provided reference genes

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