Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 6.5e-307 1056.6 541 100.0
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 3.6e-116 422.9 499 51.3
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.4e-80 304.7 521 42.6
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.7e-78 295.4 553 37.6
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 4.3e-77 293.1 566 38.2
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 7.4e-77 292.4 553 37.3
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.3e-76 291.6 553 36.7
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 6.2e-76 289.3 635 34.8
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 8.2e-76 288.9 615 36.3
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 8.2e-76 288.9 630 37.5
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.1e-75 288.5 553 36.9
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 9.0e-75 285.4 611 35.4
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 1.5e-74 284.6 592 37.7
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 6.5e-73 279.3 588 38.4
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 1.1e-72 278.5 559 38.3
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.1e-72 278.5 637 36.1
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.5e-72 277.3 640 35.0
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 2.5e-72 277.3 614 36.8
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 4.2e-72 276.6 555 36.9
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 4.2e-72 276.6 533 38.8
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 7.1e-72 275.8 626 34.8
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.6e-71 274.6 552 36.4
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 6.0e-71 272.7 606 36.1
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 1.3e-70 271.6 574 37.6
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 1.8e-70 271.2 641 35.7
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.8e-70 271.2 620 37.1
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 2.3e-70 270.8 523 40.7
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 2.3e-70 270.8 609 36.6
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 6.7e-70 269.2 551 37.0
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 1.9e-69 267.7 592 36.1
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 4.3e-69 266.5 526 40.5
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 5.7e-69 266.2 532 39.1
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 1.3e-68 265.0 621 36.6
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 2.2e-68 264.2 625 33.8
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.8e-68 263.8 548 35.9
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 6.3e-68 262.7 558 37.1
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 6.9e-67 259.2 578 37.4
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.0e-66 257.7 504 38.3
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.0e-66 257.7 578 37.0
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 4.5e-66 256.5 557 35.9
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.3e-65 255.0 538 34.8
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 1.3e-65 255.0 499 38.7
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.7e-65 254.6 535 37.2
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 6.5e-65 252.7 582 34.9
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 1.4e-64 251.5 538 34.6
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.9e-64 251.1 566 36.6
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 2.7e-63 247.3 563 36.4
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 2.7e-63 247.3 585 35.4
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 7.9e-63 245.7 574 35.5
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 1.9e-61 241.1 613 31.8
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 7.4e-61 239.2 596 33.7
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 3.1e-59 233.8 604 33.4
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 5.9e-58 229.6 578 33.2
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 1.4e-56 224.9 384 41.1
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 1.1e-53 215.3 505 35.0
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.5e-53 214.9 335 41.2
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.5e-50 204.9 214 53.3
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 2.0e-50 204.5 454 36.6
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 3.1e-43 180.6 227 47.6
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 3.1e-43 180.6 514 33.3
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 5.3e-43 179.9 201 51.2
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.5e-40 171.8 204 48.5
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 6.1e-39 166.4 411 36.0
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 1.0e-38 165.6 419 35.1
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.2e-37 162.2 455 34.9
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.0e-37 161.4 223 43.5
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 3.8e-33 147.1 402 32.6
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 2.7e-31 141.0 292 33.6
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 3.6e-31 140.6 242 37.2
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.0e-30 139.0 164 44.5
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 7.5e-29 132.9 222 38.3
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 4.5e-26 123.6 162 42.6
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.3e-25 121.3 226 36.3
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 3.3e-24 117.5 129 50.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.2e-23 115.5 232 34.5
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.0e-21 108.2 236 34.3
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.4e-21 107.1 236 30.9
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.4e-21 107.1 236 30.9
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 4.4e-21 107.1 356 29.8
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 2.2e-20 104.8 418 26.3
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 5.0e-17 93.6 191 39.3
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.8e-15 87.8 215 31.2
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 1.4e-14 85.5 355 27.0
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 7.5e-13 79.7 214 30.4
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.9e-12 77.8 265 27.5
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 8.3e-12 76.3 341 28.4
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 3.2e-11 74.3 213 29.1
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 5.4e-11 73.6 229 29.7
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 5.4e-11 73.6 226 27.9
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 9.2e-11 72.8 221 26.2
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 9.2e-11 72.8 208 29.3
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 2.0e-10 71.6 221 26.2
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 2.0e-10 71.6 228 28.5
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 2.7e-10 71.2 228 29.8
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 3.5e-10 70.9 219 26.5
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 3.5e-10 70.9 229 28.8
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 4.6e-10 70.5 235 26.4
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 4.6e-10 70.5 220 27.3
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 6.0e-10 70.1 228 28.5
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 6.0e-10 70.1 205 29.8
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 7.8e-10 69.7 228 28.1
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 7.8e-10 69.7 228 28.9
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 1.0e-09 69.3 334 26.3
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.3e-09 68.9 327 25.7
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.3e-09 68.9 228 28.5
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 1.7e-09 68.6 210 27.6
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 2.3e-09 68.2 268 26.1
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 2.3e-09 68.2 228 28.9
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 2.3e-09 68.2 169 31.4
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 5.0e-09 67.0 214 27.6
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 6.6e-09 66.6 268 24.6
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 8.6e-09 66.2 208 25.5
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 8.6e-09 66.2 113 40.7
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.5e-08 65.5 268 24.6
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.5e-08 64.7 231 28.1
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.5e-08 64.7 220 26.4
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 2.5e-08 64.7 200 29.5
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.5e-08 64.7 219 26.0
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.5e-08 64.7 219 26.0
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 4.3e-08 63.9 260 26.5
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 4.3e-08 63.9 220 26.8
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 5.6e-08 63.5 429 25.4
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 7.3e-08 63.2 259 23.2
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 2.1e-07 61.6 228 25.4
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 3.6e-07 60.8 234 25.2
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 8.0e-07 59.7 268 25.7
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.1e-06 59.3 352 24.4
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 1.1e-06 59.3 183 24.6
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 3.1e-06 57.8 217 25.8
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 3.1e-06 57.8 295 24.4
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 3.1e-06 57.8 269 25.7
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 6.8e-06 56.6 221 28.1
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 6.8e-06 56.6 218 25.7
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 8.9e-06 56.2 220 26.4


User provided reference genes

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