Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001273 Vanilla planifolia HOM05D001480 ORTHO05D001331 4.1e-134 481.5 261 100.0
HPP92_001256 Vanilla planifolia HOM05D001480 ORTHO05D001331 1.2e-64 250.8 147 98.6
TAR365G0185 Trochodendron aralioides HOM05D001480 ORTHO05D001331 2.5e-14 83.6 137 49.6
Atru.chr3.1995 Acer truncatum HOM05D001480 ORTHO05D001331 2.3e-12 77.0 134 51.5
Manes.01G010000 Manihot esculenta HOM05D001480 ORTHO05D001331 2.3e-12 77.0 282 33.0
Ciclev10019649m.g Citrus clementina HOM05D001480 ORTHO05D001331 3.1e-12 76.6 139 51.1
GSVIVG01038251001 Vitis vinifera HOM05D001480 ORTHO05D001331 3.1e-12 76.6 140 49.3
Dinv33246 Davidia involucrata HOM05D001480 ORTHO05D001331 5.2e-12 75.9 146 47.9
Haze_11129 Corylus avellana HOM05D001480 ORTHO05D001331 5.8e-11 72.4 143 48.3
Sabra17G0008300 Salix brachista HOM05D001480 ORTHO05D001331 9.9e-11 71.6 134 47.8
vmacro00723 Vaccinium macrocarpon HOM05D001480 ORTHO05D001331 9.9e-11 71.6 146 43.2
ATR0743G182 Amborella trichopoda HOM05D001480 ORTHO05D001331 1.7e-10 70.9 125 52.0
Os08g0542900 Oryza sativa ssp. japonica HOM05D001480 ORTHO05D001331 1.7e-10 70.9 130 47.7
CiPaw.02G124800 Carya illinoinensis HOM05D001480 ORTHO05D001331 2.2e-10 70.5 151 43.0
Nn7g37458 Nelumbo nucifera HOM05D001480 ORTHO05D001331 3.8e-10 69.7 154 41.6
Thecc.05G001700 Theobroma cacao HOM05D001480 ORTHO05D001331 7.1e-09 65.5 145 47.6
Aqoxy2G04181 Aquilegia oxysepala HOM05D001480 ORTHO05D001331 9.2e-09 65.1 141 43.3
Eucgr.H00248 Eucalyptus grandis HOM05D001480 ORTHO05D001331 9.2e-09 65.1 136 44.1
CDE02G0805 Ceratophyllum demersum HOM05D001480 ORTHO05D001331 1.2e-08 64.7 130 46.9
HanXRQChr01g0023641 Helianthus annuus HOM05D001480 ORTHO05D001331 1.2e-08 64.7 132 41.7
Zm00001eb037380 Zea mays HOM05D001480 ORTHO05D001331 1.6e-08 64.3 246 33.7
Actinidia18396 Actinidia chinensis HOM05D001480 ORTHO05D001331 2.7e-08 63.5 141 41.8
AUR62002484 Chenopodium quinoa HOM05D001480 ORTHO05D001331 2.7e-08 63.5 132 43.2
Os11g0248200 Oryza sativa ssp. japonica HOM05D001480 ORTHO05D001331 2.7e-08 63.5 167 42.5
Cpa.g.sc151.8 Carica papaya HOM05D001480 ORTHO05D001331 3.5e-08 63.2 137 47.4
Sc19g0002410 Simmondsia chinensis HOM05D001480 ORTHO05D001331 6.0e-08 62.4 132 43.9
ECA248G0698 Erigeron canadensis HOM05D003449 ORTHO05D004133 7.8e-08 62.0 287 28.2
Os12g0225100 Oryza sativa ssp. japonica HOM05D001480 ORTHO05D001331 7.8e-08 62.0 179 38.5
QL10p064368 Quercus lobata HOM05D001480 ORTHO05D001331 7.8e-08 62.0 142 42.3
Glyma.03G264600 Glycine max HOM05D001480 ORTHO05D001331 1.7e-07 60.8 141 41.1
Gohir.A01G231500 Gossypium hirsutum HOM05D001480 ORTHO05D001331 1.7e-07 60.8 153 43.1
TWI15G1105 Tripterygium wilfordii HOM05D001480 ORTHO05D001331 2.3e-07 60.5 143 40.6
Duzib128G1653 Durio zibethinus HOM05D001480 ORTHO05D001331 3.9e-07 59.7 150 42.0
Gohir.D01G221600 Gossypium hirsutum HOM05D001480 ORTHO05D001331 3.9e-07 59.7 139 45.3
CSS0003598 Camellia sinensis var. sinensis HOM05D001480 ORTHO05D001331 5.1e-07 59.3 147 44.2
Glyma.19G263600 Glycine max HOM05D001480 ORTHO05D001331 6.6e-07 58.9 141 41.1
VMungo1309G0503 Vigna mungo HOM05D001480 ORTHO05D001331 8.6e-07 58.5 142 41.5
AUR62023708 Chenopodium quinoa HOM05D001480 ORTHO05D001331 1.1e-06 58.2 132 44.7
Duzib128G1772 Durio zibethinus HOM05D001480 ORTHO05D001331 1.1e-06 58.2 150 40.7
FAN23G1016 Fragaria x ananassa HOM05D001480 ORTHO05D001331 1.9e-06 57.4 153 37.9
Medtr7g117595 Medicago truncatula HOM05D001480 ORTHO05D001331 1.9e-06 57.4 143 36.4
Sabra07G0116000 Salix brachista HOM05D001480 ORTHO05D001331 1.9e-06 57.4 132 43.9
Gorai.002G268200 Gossypium raimondii HOM05D001480 ORTHO05D001331 2.5e-06 57.0 139 44.6
Potri.007G144800 Populus trichocarpa HOM05D001480 ORTHO05D001331 2.5e-06 57.0 283 31.4
TWI63G0448 Tripterygium wilfordii HOM05D001480 ORTHO05D001331 2.5e-06 57.0 129 34.9
Actinidia34564 Actinidia chinensis HOM05D001480 ORTHO05D001331 3.3e-06 56.6 147 39.5
Hund22596 Selenicereus undatus HOM05D001480 ORTHO05D001331 3.3e-06 56.6 153 43.1
CiPaw.01G201800 Carya illinoinensis HOM05D001480 ORTHO05D001331 4.3e-06 56.2 39 69.2
ClCG09G014490 Citrullus lanatus HOM05D001480 ORTHO05D001331 4.3e-06 56.2 271 32.8
Mapoly0020s0058 Marchantia polymorpha HOM05D001480 ORTHO05D001331 4.3e-06 56.2 137 42.3
DCAR_027495 Daucus carota HOM05D001480 ORTHO05D001331 5.6e-06 55.8 42 64.3
Ca_09569_v3 Cicer arietinum L. HOM05D001480 ORTHO05D001331 9.6e-06 55.1 116 37.1
Phvul.009G263300 Phaseolus vulgaris HOM05D001480 ORTHO05D001331 9.6e-06 55.1 142 40.8
TWI15G0514 Tripterygium wilfordii HOM05D001480 ORTHO05D001331 9.6e-06 55.1 131 35.9


User provided reference genes

Program Settings