Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 6.6e-193 677.2 337 100.0
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.2e-123 445.7 219 99.1
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 7.0e-110 401.4 333 59.5
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.6e-104 382.9 332 57.2
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 6.6e-100 368.2 335 56.1
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 2.5e-99 366.3 336 54.2
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 7.3e-99 364.8 333 52.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 6.2e-98 361.7 338 55.0
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 8.1e-98 361.3 336 53.9
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 8.1e-98 361.3 338 55.0
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.2e-96 357.5 335 52.8
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.5e-96 357.1 335 52.5
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.2e-95 353.2 335 53.4
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.9e-95 352.1 341 51.3
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 6.4e-95 351.7 336 52.7
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 8.3e-95 351.3 335 53.4
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.1e-94 350.9 336 52.7
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.4e-94 350.5 335 53.1
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 4.1e-94 349.0 335 52.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 5.4e-94 348.6 336 52.1
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 7.1e-94 348.2 335 51.3
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 2.1e-93 346.7 338 53.6
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 2.1e-93 346.7 338 53.6
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.5e-93 345.9 337 52.8
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 4.6e-93 345.5 329 51.4
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.6e-93 345.5 333 51.4
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 7.8e-93 344.7 335 52.2
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.0e-92 344.4 335 50.4
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.3e-92 343.2 338 51.8
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.3e-92 343.2 335 50.4
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 3.0e-92 342.8 335 51.3
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 5.1e-92 342.0 324 51.2
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 5.1e-92 342.0 336 51.2
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 6.6e-92 341.7 335 51.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 6.6e-92 341.7 334 50.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.1e-91 340.9 332 49.7
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 2.5e-91 339.7 332 51.5
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 3.3e-91 339.3 336 50.6
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.6e-91 338.6 345 50.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 7.3e-91 338.2 335 51.9
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.3e-91 338.2 335 51.0
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 7.3e-91 338.2 354 49.4
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 7.3e-91 338.2 336 50.6
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.6e-90 337.0 333 51.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.6e-90 335.9 335 49.0
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 4.7e-90 335.5 335 48.4
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 8.1e-90 334.7 336 49.7
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.1e-89 334.3 336 48.8
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.8e-89 333.6 332 50.6
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 5.2e-89 332.0 335 49.0
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 5.2e-89 332.0 335 48.7
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.0e-88 330.1 333 49.2
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 4.4e-88 328.9 334 50.0
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.3e-87 327.4 335 49.3
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.3e-87 327.4 308 53.6
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.7e-87 327.0 336 49.4
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.7e-87 327.0 339 51.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.2e-87 326.6 336 50.6
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 2.9e-87 326.2 329 49.8
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 2.9e-87 326.2 336 49.7
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 3.7e-87 325.9 335 49.6
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 4.9e-87 325.5 335 50.1
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 6.4e-87 325.1 334 50.3
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.1e-86 324.3 335 49.0
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.1e-86 324.3 335 49.6
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.4e-86 323.9 336 49.4
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.4e-86 323.9 338 48.2
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.9e-86 323.6 336 48.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.9e-86 323.6 335 49.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 3.2e-86 322.8 335 49.6
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.1e-86 322.4 335 49.9
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 4.1e-86 322.4 335 49.6
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.1e-86 322.4 335 49.6
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 4.1e-86 322.4 333 48.9
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 5.4e-86 322.0 333 49.2
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 7.1e-86 321.6 336 47.9
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 7.1e-86 321.6 336 50.6
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 9.2e-86 321.2 337 50.1
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.2e-85 320.9 337 47.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 6.0e-85 318.5 336 50.3
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.7e-84 317.0 335 48.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 5.1e-84 315.5 336 47.0
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 2.5e-83 313.2 337 48.1
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.3e-83 312.4 328 46.6
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.3e-83 312.4 328 46.6
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 2.8e-82 309.7 332 48.2
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.7e-82 308.9 332 47.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.1e-81 307.8 328 47.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.4e-81 307.4 322 49.4
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.8e-81 307.0 330 47.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.4e-81 306.6 338 49.4
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 6.8e-81 305.1 347 46.7
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 7.6e-80 301.6 329 48.9
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 7.6e-80 301.6 348 44.3
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 9.9e-80 301.2 338 49.7
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 4.2e-78 295.8 322 48.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.0e-68 263.1 336 44.0
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 3.9e-68 262.7 335 42.4
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 9.0e-65 251.5 221 53.4
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 9.3e-62 241.5 207 57.5
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 4.8e-58 229.2 361 34.9
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-57 228.0 198 54.5
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-57 228.0 198 54.5
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.3e-57 225.7 215 50.7
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.8e-56 222.2 205 51.7
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 6.0e-53 212.2 157 59.9
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.7e-52 208.8 350 35.4
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 3.7e-50 203.0 342 34.2
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.4e-41 174.5 167 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.7e-39 167.5 255 36.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 4.2e-38 162.9 278 34.5
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 9.1e-33 145.2 173 41.6
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 2.1e-29 134.0 142 50.7
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.3e-28 130.6 142 50.0
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 2.7e-21 107.1 106 48.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 5.2e-20 102.8 116 49.1
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.5e-19 101.3 115 45.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 3.3e-19 100.1 118 44.9
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 7.5e-19 99.0 115 46.1
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 5.9e-16 89.4 219 28.3
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.8e-09 67.8 91 42.9


User provided reference genes

Program Settings