Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001255 Vanilla planifolia HOM05D007981 ORTHO05D001345 4.1e-207 724.5 385 100.0
HPP92_011709 Vanilla planifolia HOM05D007981 ORTHO05D001345 1.3e-54 218.0 462 41.8
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 2.3e-24 117.5 396 32.1
HPP92_001919 Vanilla planifolia HOM05D007981 ORTHO05D001345 3.0e-24 117.1 198 40.9
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 4.8e-22 109.8 372 33.1
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 6.3e-22 109.4 382 30.6
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 2.0e-20 104.4 383 31.3
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 3.2e-18 97.1 404 29.7
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 3.2e-18 97.1 398 31.2
Gohir.A05G001200 Gossypium hirsutum HOM05D007981 ORTHO05D001345 1.2e-17 95.1 119 49.6
Migut.G01332 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.1e-17 94.4 169 40.2
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 3.6e-17 93.6 393 30.0
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 3.6e-17 93.6 157 40.8
Gohir.D05G001500 Gossypium hirsutum HOM05D007981 ORTHO05D001345 4.7e-17 93.2 166 42.2
Migut.G01304 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.8e-16 91.3 156 40.4
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 1.8e-16 91.3 274 33.6
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 3.0e-16 90.5 157 40.1
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 3.0e-16 90.5 398 29.6
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 6.7e-16 89.4 393 28.5
Os09g0518600 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 8.8e-16 89.0 248 32.3
PGR031G0831 Punica granatum HOM05D007981 ORTHO05D001345 1.5e-15 88.2 133 42.1
Rhsim05G0162500 Rhododendron simsii HOM05D007981 ORTHO05D001345 2.6e-15 87.4 409 28.4
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 3.7e-14 83.6 384 27.9
SalBow1G7719 Salvia bowleyana HOM05D007981 ORTHO05D001345 6.3e-14 82.8 138 42.0
SalBow1G1067 Salvia bowleyana HOM05D007981 ORTHO05D001345 8.2e-14 82.4 138 42.0
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 8.2e-14 82.4 400 26.8
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 1.1e-13 82.0 383 30.0
Aqoxy1G01338 Aquilegia oxysepala HOM05D007981 ORTHO05D001345 2.4e-13 80.9 143 39.2
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 2.4e-13 80.9 374 28.3
Os08g0543000 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 5.3e-13 79.7 138 39.9
VMungo1127G1819 Vigna mungo HOM05D007981 ORTHO05D001345 9.1e-13 79.0 144 40.3
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 1.2e-12 78.6 392 25.5
Migut.A01091 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.6e-12 78.2 376 29.3
Prupe.6G365700 Prunus persica HOM05D007981 ORTHO05D001345 1.6e-12 78.2 112 43.8
SalBow2G2157 Salvia bowleyana HOM05D007981 ORTHO05D001345 1.6e-12 78.2 178 35.4
Solyc11g008840.3 Solanum lycopersicum HOM05D007981 ORTHO05D001345 1.6e-12 78.2 104 46.2
MBI07_g10349_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 2.7e-12 77.4 97 46.4
CSS0007963 Camellia sinensis var. sinensis HOM05D007981 ORTHO05D001345 5.0e-11 73.2 399 28.1
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 6.5e-11 72.8 395 30.1
Phvul.011G197200 Phaseolus vulgaris HOM05D007981 ORTHO05D001345 6.5e-11 72.8 384 27.9
Glyma.15G228000 Glycine max HOM05D007981 ORTHO05D001345 8.5e-11 72.4 386 26.2
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 1.1e-10 72.0 392 29.1
Migut.G01299 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.9e-10 71.2 111 42.3
Cc09_g04330 Coffea canephora HOM05D007981 ORTHO05D001345 3.2e-10 70.5 381 28.6
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 4.2e-10 70.1 396 30.3
FvH4_6g00040 Fragaria vesca HOM05D007981 ORTHO05D001345 4.2e-10 70.1 376 27.7
Psat4g190600 Pisum sativum HOM05D007981 ORTHO05D001345 5.5e-10 69.7 146 35.6
Sed0005322 Sechium edule HOM05D007981 ORTHO05D001345 5.5e-10 69.7 179 35.8
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 7.2e-10 69.3 392 26.3
FAN09G0734 Fragaria x ananassa HOM05D007981 ORTHO05D001345 7.2e-10 69.3 380 26.1
Zm00001eb037390 Zea mays HOM05D007981 ORTHO05D001345 1.2e-09 68.6 156 35.9
Migut.G01343 Erythranthe guttata HOM05D007981 ORTHO05D001345 6.1e-09 66.2 142 35.9
Medtr8g040940 Medicago truncatula HOM05D007981 ORTHO05D001345 1.4e-08 65.1 146 34.9
Lj3g0009424 Lotus japonicus HOM05D007981 ORTHO05D001345 1.8e-08 64.7 399 27.6
PSO357G0025 Papaver somniferum HOM05D034346 ORTHO05D001345 3.0e-08 63.9 163 34.4
PGSC0003DMG400042123 Solanum tuberosum HOM05D007981 ORTHO05D001345 3.0e-08 63.9 372 28.8
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 4.0e-08 63.5 99 40.4
arahy.Tifrunner.gnm1.ann1.8NJ4D9 Arachis hypogaea HOM05D007981 ORTHO05D001345 5.2e-08 63.2 368 26.4
Lsat_1_v5_gn_8_12340 Lactuca sativa HOM05D001930 ORTHO05D001345 5.2e-08 63.2 92 41.3
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 5.2e-08 63.2 134 32.8
Migut.G01129 Erythranthe guttata HOM05D007981 ORTHO05D001345 6.8e-08 62.8 149 34.9
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 2.0e-07 61.2 93 41.9
DCAR_024834 Daucus carota HOM05D001930 ORTHO05D001345 2.6e-07 60.8 95 37.9
MD12G1164800 Malus domestica HOM05D001930 ORTHO05D001345 2.6e-07 60.8 174 31.6
Nn2g11456 Nelumbo nucifera HOM05D001930 ORTHO05D001345 2.6e-07 60.8 141 36.2
Sabra10G0136000 Salix brachista HOM05D007981 ORTHO05D001345 2.6e-07 60.8 127 33.1
Thhalv10016404m.g Eutrema salsugineum HOM05D001930 ORTHO05D001345 3.4e-07 60.5 104 38.5
Lj2C405T1 Lonicera japonica HOM05D007981 ORTHO05D001345 3.4e-07 60.5 76 51.3
SEGI_29321 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 3.4e-07 60.5 142 33.1
FAN01G1543 Fragaria x ananassa HOM05D001930 ORTHO05D001345 4.4e-07 60.1 146 34.9
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea HOM05D001930 ORTHO05D001345 5.7e-07 59.7 146 36.3
BcaB02g09056 Brassica carinata HOM05D001930 ORTHO05D001345 5.7e-07 59.7 163 33.1
FvH4_7g24320 Fragaria vesca HOM05D001930 ORTHO05D001345 5.7e-07 59.7 146 34.9
FAN10G2989 Fragaria x ananassa HOM05D001930 ORTHO05D001345 5.7e-07 59.7 146 34.9
ATR0618G241 Amborella trichopoda HOM05D001930 ORTHO05D001345 7.5e-07 59.3 129 34.9
Migut.G01335 Erythranthe guttata HOM05D007981 ORTHO05D001345 7.5e-07 59.3 142 34.5
FAN03G2510 Fragaria x ananassa HOM05D001930 ORTHO05D001345 7.5e-07 59.3 146 34.9
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 7.5e-07 59.3 147 36.7
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 7.5e-07 59.3 143 33.6
Carub.0004s2221 Capsella rubella HOM05D001930 ORTHO05D001345 9.8e-07 58.9 178 30.3
Lj6g0015169 Lotus japonicus HOM05D001930 ORTHO05D001345 9.8e-07 58.9 142 33.8
LjContig00142g0017848 Lotus japonicus HOM05D001930 ORTHO05D001345 9.8e-07 58.9 142 33.8
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 9.8e-07 58.9 142 35.2
THA.LOC104810086 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 9.8e-07 58.9 117 35.0
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 9.8e-07 58.9 147 36.7
AL4G37690 Arabidopsis lyrata HOM05D001930 ORTHO05D001345 1.3e-06 58.5 178 31.5
arahy.Tifrunner.gnm1.ann1.26SKGH Arachis hypogaea HOM05D007981 ORTHO05D001345 1.3e-06 58.5 368 26.4
Lj2C407T2 Lonicera japonica HOM05D007981 ORTHO05D001345 1.3e-06 58.5 101 42.6
BolC4t22362H Brassica oleracea HOM05D001930 ORTHO05D001345 1.7e-06 58.2 161 31.7
CANSAT56G4542 Cannabis sativa HOM05D001930 ORTHO05D001345 1.7e-06 58.2 153 30.1
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 1.7e-06 58.2 148 37.8
RcHm_v2.0_Chr1g0369981 Rosa chinensis HOM05D001930 ORTHO05D001345 1.7e-06 58.2 145 34.5
Ciclev10030993m.g Citrus clementina HOM05D001930 ORTHO05D001345 2.2e-06 57.8 160 32.5
Dinv03280 Davidia involucrata HOM05D007981 ORTHO05D001345 2.2e-06 57.8 66 54.5
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 2.2e-06 57.8 91 38.5
Phvul.001G241800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 2.2e-06 57.8 143 32.9
AT2G40070 Arabidopsis thaliana HOM05D001930 ORTHO05D001345 2.8e-06 57.4 177 30.5
Ciclev10011390m.g Citrus clementina HOM05D001930 ORTHO05D001345 2.8e-06 57.4 170 33.5
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 2.8e-06 57.4 163 30.1
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 2.8e-06 57.4 143 32.9
Sp4g22360 Schrenkiella parvula HOM05D001930 ORTHO05D001345 2.8e-06 57.4 161 30.4
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 3.7e-06 57.0 92 41.3
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 3.7e-06 57.0 173 34.1
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 3.7e-06 57.0 111 36.0
Lalb_Chr18g0052641 Lupinus albus HOM05D001930 ORTHO05D001345 3.7e-06 57.0 156 33.3
THA.LOC104810417 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 3.7e-06 57.0 162 32.7
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 4.8e-06 56.6 142 34.5
ClCG11G006220 Citrullus lanatus HOM05D001930 ORTHO05D001345 4.8e-06 56.6 147 32.0
MELO3C008291.2 Cucumis melo HOM05D001930 ORTHO05D001345 4.8e-06 56.6 147 32.0
Glyma.18G028700 Glycine max HOM05D001930 ORTHO05D001345 4.8e-06 56.6 179 32.4
RcHm_v2.0_Chr4g0431121 Rosa chinensis HOM05D003830 ORTHO05D004446 4.8e-06 56.6 185 31.4
Solyc05g052715.1 Solanum lycopersicum HOM05D001930 ORTHO05D001345 6.3e-06 56.2 126 34.9
VMungo1383G0091 Vigna mungo HOM05D001930 ORTHO05D001345 6.3e-06 56.2 143 32.2
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 8.3e-06 55.8 93 41.9
Duzib114G0676 Durio zibethinus HOM05D001930 ORTHO05D001345 8.3e-06 55.8 93 37.6
FvH4_4g24320 Fragaria vesca HOM05D003830 ORTHO05D004446 8.3e-06 55.8 174 32.2
FAN17G1537 Fragaria x ananassa HOM05D003830 ORTHO05D004446 8.3e-06 55.8 162 32.7
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 8.3e-06 55.8 435 25.3
Oeu064385.2 Olea europaea HOM05D001930 ORTHO05D001345 8.3e-06 55.8 145 33.8
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 8.3e-06 55.8 103 35.0
Phvul.001G259600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 8.3e-06 55.8 162 32.7


User provided reference genes

Program Settings