Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 3.2e-181 638.3 318 100.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 2.9e-105 386.0 275 70.2
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.5e-101 373.6 270 69.3
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 3.3e-101 372.5 251 74.1
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 4.8e-100 368.6 243 72.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 6.2e-100 368.2 243 73.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.2e-98 364.0 243 71.2
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 2.6e-98 362.8 242 71.5
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.6e-98 362.8 264 67.8
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.7e-97 360.1 243 71.6
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 3.8e-97 359.0 243 72.4
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.9e-97 358.6 241 72.6
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 6.4e-97 358.2 243 71.2
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.1e-96 357.5 250 67.2
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.9e-96 356.7 251 70.5
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 7.1e-96 354.8 246 69.1
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 9.3e-96 354.4 264 65.9
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.6e-95 353.6 244 71.3
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.6e-95 353.6 253 68.8
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 2.1e-95 353.2 244 70.1
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.7e-95 352.8 243 70.0
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.7e-95 352.8 246 69.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 4.6e-95 352.1 241 70.5
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 4.6e-95 352.1 247 68.0
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 6.0e-95 351.7 246 69.9
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 7.9e-95 351.3 243 70.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 7.9e-95 351.3 243 70.0
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.0e-94 350.9 243 69.1
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.3e-94 350.5 272 63.6
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.3e-94 350.5 258 66.7
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.8e-94 350.1 243 69.5
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 3.0e-94 349.4 260 66.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 3.9e-94 349.0 246 69.5
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 5.1e-94 348.6 245 69.0
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 5.1e-94 348.6 243 68.7
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 8.7e-94 347.8 243 69.5
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.9e-93 346.7 243 68.3
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.3e-93 345.9 241 68.0
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.3e-93 345.9 241 68.0
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 4.3e-93 345.5 242 69.4
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 5.6e-93 345.1 241 70.1
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 5.6e-93 345.1 260 65.0
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 9.6e-93 344.4 241 67.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 2.1e-92 343.2 241 68.9
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 3.7e-92 342.4 255 66.7
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 3.7e-92 342.4 275 62.9
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 6.2e-92 341.7 245 67.8
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 2.4e-91 339.7 244 67.6
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 5.3e-91 338.6 244 66.8
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 5.3e-91 338.6 225 72.4
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 6.9e-91 338.2 251 66.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.9e-91 338.2 244 67.6
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 6.9e-91 338.2 244 68.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 6.9e-91 338.2 244 68.4
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 6.9e-91 338.2 259 65.3
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 6.9e-91 338.2 259 65.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 6.9e-91 338.2 259 65.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 6.9e-91 338.2 245 66.5
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 6.9e-91 338.2 255 63.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.2e-90 337.4 258 65.5
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.2e-90 337.4 258 65.5
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 6.4e-89 331.6 247 67.6
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.9e-88 330.1 260 63.5
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.2e-88 329.3 243 68.3
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.3e-84 317.4 212 71.7
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.1e-84 316.6 272 59.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 6.2e-84 315.1 215 70.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.1e-83 314.3 259 60.6
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 7.6e-82 308.1 197 74.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 3.8e-81 305.8 213 70.0
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 8.4e-81 304.7 248 62.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.4e-80 303.9 266 57.5
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.2e-80 302.4 219 68.0
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.2e-80 302.4 241 64.7
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 4.6e-79 298.9 304 51.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.1e-77 294.3 214 69.2
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 7.4e-77 291.6 198 70.2
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 9.0e-75 284.6 183 73.8
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 2.9e-73 279.6 250 58.4
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 5.0e-73 278.9 243 57.2
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.5e-72 276.6 194 68.6
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 5.5e-72 275.4 242 55.0
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 9.4e-72 274.6 194 66.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 6.1e-71 271.9 284 50.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 7.4e-69 265.0 246 52.0
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.1e-67 259.6 167 73.1
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 6.9e-67 258.5 242 52.9
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 7.7e-66 255.0 183 69.4
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.3e-65 254.2 187 64.7
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.9e-65 253.1 258 49.6
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 8.5e-65 251.5 228 54.8
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.4e-59 234.2 233 52.8
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.8e-59 233.8 180 59.4
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.4e-59 233.4 171 67.3
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.2e-58 231.1 185 61.1
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.5e-58 230.7 209 55.0
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.5e-56 222.2 250 49.2
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.0e-54 216.5 185 60.5
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 4.0e-38 162.9 194 47.9
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 3.7e-36 156.4 140 55.7
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 4.8e-36 156.0 122 61.5
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 5.9e-26 122.5 88 67.0
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.1e-24 118.2 102 56.9
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-23 114.8 94 50.0
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.0e-22 111.7 88 60.2
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-18 97.4 120 46.7
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.0e-17 92.8 57 71.9
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.6e-17 92.4 121 45.5
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.6e-15 87.8 68 54.4
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.1e-14 85.1 174 34.5
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 4.0e-14 83.2 59 71.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 7.0e-11 72.4 41 75.6
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.6e-10 71.2 59 61.0
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 3.5e-10 70.1 47 63.8


User provided reference genes

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