Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.4e-105 386.3 197 100.0
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 4.8e-42 175.3 182 52.7
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.2e-40 170.6 175 50.3
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.0e-39 167.5 180 50.6
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 1.7e-39 166.8 166 53.0
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.7e-39 166.8 173 50.9
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 1.9e-38 163.3 178 50.6
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 5.5e-38 161.8 177 46.9
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 9.3e-38 161.0 169 52.1
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 9.3e-38 161.0 163 52.1
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 1.6e-37 160.2 167 49.7
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 3.5e-37 159.1 166 47.6
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 3.5e-37 159.1 173 49.7
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 3.5e-37 159.1 173 49.7
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 7.9e-37 157.9 177 46.9
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 1.0e-36 157.5 177 46.3
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.0e-36 157.5 171 48.0
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.0e-36 157.5 177 46.9
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.3e-36 157.1 176 45.5
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 3.0e-36 156.0 172 47.7
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 3.9e-36 155.6 171 46.8
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 3.9e-36 155.6 171 46.8
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 3.9e-36 155.6 155 52.3
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 5.1e-36 155.2 167 49.7
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 6.7e-36 154.8 177 45.8
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 8.7e-36 154.5 170 45.9
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 8.7e-36 154.5 177 46.9
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 8.7e-36 154.5 173 49.7
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 8.7e-36 154.5 166 46.4
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.5e-35 153.7 161 49.7
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 1.9e-35 153.3 171 48.0
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.9e-35 153.3 177 45.8
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 2.5e-35 152.9 167 46.1
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 3.3e-35 152.5 167 49.1
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 4.3e-35 152.1 172 45.3
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 5.7e-35 151.8 176 46.0
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 5.7e-35 151.8 176 48.3
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 9.7e-35 151.0 173 48.6
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.3e-34 150.6 179 46.4
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 1.6e-34 150.2 164 48.2
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 1.6e-34 150.2 157 50.3
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.6e-34 150.2 177 48.0
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.7e-34 149.1 167 46.1
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 3.7e-34 149.1 173 45.1
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.4e-33 147.1 180 45.0
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 1.4e-33 147.1 176 46.0
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 1.8e-33 146.7 151 49.0
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.8e-33 146.7 185 48.1
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 1.8e-33 146.7 174 47.1
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 1.8e-33 146.7 174 47.1
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 2.4e-33 146.4 178 48.9
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 3.1e-33 146.0 169 47.3
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 3.1e-33 146.0 162 51.2
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 4.1e-33 145.6 172 47.1
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 4.1e-33 145.6 166 48.8
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 5.3e-33 145.2 192 43.2
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 5.3e-33 145.2 162 50.0
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 5.3e-33 145.2 156 52.6
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 6.9e-33 144.8 172 48.8
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 6.9e-33 144.8 172 48.8
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 6.9e-33 144.8 178 44.4
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 9.0e-33 144.4 176 48.3
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 9.0e-33 144.4 176 48.3
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 9.0e-33 144.4 162 50.6
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.2e-32 144.1 178 44.4
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 1.5e-32 143.7 176 43.8
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 2.6e-32 142.9 170 45.3
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 3.4e-32 142.5 181 48.6
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.4e-32 142.5 193 40.9
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 4.5e-32 142.1 181 46.4
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 4.5e-32 142.1 176 44.9
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 7.7e-32 141.4 123 52.0
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.0e-31 141.0 176 46.0
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.7e-31 140.2 173 43.4
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.7e-31 140.2 171 45.0
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 2.2e-31 139.8 177 42.4
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 2.9e-31 139.4 176 45.5
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 3.8e-31 139.0 184 42.4
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 5.0e-31 138.7 188 45.2
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 5.0e-31 138.7 181 44.8
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 5.0e-31 138.7 181 46.4
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 6.5e-31 138.3 173 48.0
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 8.5e-31 137.9 167 46.7
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 3.2e-30 136.0 180 46.7
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 7.2e-30 134.8 193 42.5
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.6e-29 133.7 166 44.6
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 3.6e-29 132.5 181 45.9
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 1.8e-28 130.2 85 67.1
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 3.9e-28 129.0 89 60.7
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 6.7e-28 128.3 86 66.3
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 8.8e-28 127.9 112 53.6
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.5e-27 127.1 108 56.5
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.3e-27 125.9 227 37.0
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 7.4e-27 124.8 148 42.6
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 4.8e-26 122.1 166 41.0
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 1.1e-25 120.9 197 40.1
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.1e-25 120.9 140 43.6
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 2.0e-24 116.7 181 40.3
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 7.7e-24 114.8 181 38.1
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 8.5e-23 111.3 147 42.2
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 4.2e-22 109.0 210 34.8
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.2e-21 107.5 79 60.8
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 4.7e-21 105.5 172 39.0
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.7e-21 105.5 78 61.5
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 6.1e-21 105.1 156 37.2
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 2.3e-20 103.2 100 48.0
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 5.1e-20 102.1 149 37.6
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 8.8e-20 101.3 167 37.7
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 8.8e-20 101.3 98 51.0
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 7.4e-19 98.2 180 36.7
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 3.7e-18 95.9 73 52.1
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 3.7e-18 95.9 62 67.7
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 6.3e-18 95.1 190 34.2
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 6.3e-18 95.1 190 34.2
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 1.8e-12 77.0 114 41.2
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 2.3e-12 76.6 107 38.3
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.1e-09 67.8 79 45.6
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 5.3e-09 65.5 76 40.8
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 9.1e-09 64.7 57 50.9
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 9.1e-09 64.7 143 33.6


User provided reference genes

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