Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.6e-106 388.7 188 100.0
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 4.0e-54 215.3 139 74.8
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 5.7e-53 211.5 138 74.6
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.1e-51 207.2 124 79.0
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.4e-51 206.1 137 76.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 7.0e-51 204.5 170 61.2
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.2e-50 203.8 190 57.9
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.2e-50 203.8 190 57.9
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.0e-50 203.0 122 77.9
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.0e-50 203.0 124 75.8
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 3.5e-50 202.2 122 77.0
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 3.5e-50 202.2 139 70.5
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 3.5e-50 202.2 182 61.5
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 4.6e-50 201.8 124 75.0
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 5.9e-50 201.4 124 74.2
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.7e-49 199.9 122 77.0
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 3.0e-49 199.1 123 76.4
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.0e-49 199.1 127 74.8
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 3.9e-49 198.7 124 76.6
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.9e-49 198.7 177 59.9
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 5.0e-49 198.4 122 75.4
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 6.6e-49 198.0 124 74.2
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 6.6e-49 198.0 147 66.0
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 8.6e-49 197.6 143 68.5
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 8.6e-49 197.6 173 60.1
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.1e-48 197.2 121 76.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.9e-48 196.4 168 61.9
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.5e-48 196.1 124 75.0
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 2.5e-48 196.1 140 67.9
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 3.3e-48 195.7 147 68.7
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 4.3e-48 195.3 166 61.4
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 5.6e-48 194.9 123 74.0
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 7.3e-48 194.5 181 55.8
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 9.5e-48 194.1 122 76.2
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.2e-47 193.7 115 78.3
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.6e-47 193.4 122 75.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.6e-47 193.4 141 66.0
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 2.1e-47 193.0 146 65.1
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 2.1e-47 193.0 144 68.8
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 2.1e-47 193.0 199 55.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 2.1e-47 193.0 122 73.8
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.8e-47 192.6 138 66.7
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.8e-47 192.6 123 74.0
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 3.6e-47 192.2 136 69.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 3.6e-47 192.2 170 57.1
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 3.6e-47 192.2 147 66.7
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 3.6e-47 192.2 114 79.8
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 4.7e-47 191.8 124 72.6
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.5e-45 186.8 138 66.7
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.5e-45 186.8 171 58.5
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 2.6e-45 186.0 126 71.4
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 2.6e-45 186.0 126 71.4
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 2.6e-45 186.0 126 69.8
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.6e-45 186.0 158 57.0
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 3.4e-45 185.7 125 72.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 4.4e-45 185.3 122 72.1
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 4.4e-45 185.3 122 72.1
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.8e-45 184.9 122 73.8
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 5.8e-45 184.9 122 72.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 7.5e-45 184.5 125 72.8
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 7.5e-45 184.5 125 72.8
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 7.5e-45 184.5 114 75.4
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 9.8e-45 184.1 134 67.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.3e-44 183.7 132 70.5
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.3e-44 183.7 126 71.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.7e-44 183.3 138 63.8
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 4.9e-44 181.8 124 70.2
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 8.3e-44 181.0 123 72.4
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 8.3e-44 181.0 125 69.6
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 8.3e-44 181.0 176 55.7
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.4e-43 180.3 184 56.5
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 2.4e-43 179.5 156 60.9
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 3.2e-43 179.1 187 55.6
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 7.0e-43 177.9 122 72.1
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 9.2e-43 177.6 138 65.9
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.0e-42 176.4 186 54.8
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.0e-42 176.4 124 63.7
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.7e-42 176.0 121 73.6
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 6.0e-42 174.9 135 68.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 6.0e-42 174.9 125 66.4
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.3e-41 173.7 134 63.4
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.7e-41 173.3 114 73.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 3.3e-40 169.1 121 70.2
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.3e-40 169.1 154 55.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 9.5e-40 167.5 128 67.2
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.2e-37 160.6 125 62.4
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.2e-35 152.5 123 61.8
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 9.2e-35 151.0 182 48.4
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 9.2e-35 151.0 182 48.4
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.1e-34 149.8 138 58.0
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.7e-34 149.4 122 63.1
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 6.6e-33 144.8 135 53.3
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 3.6e-31 139.0 137 52.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 2.4e-30 136.3 117 55.6
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 6.8e-30 134.8 123 57.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 8.4e-28 127.9 122 50.8
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.0e-25 120.9 304 29.9
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.9e-24 116.7 82 67.1
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.3e-24 114.8 82 65.9
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 9.6e-24 114.4 127 49.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 4.7e-23 112.1 82 65.9
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 9.9e-21 104.4 80 65.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 4.2e-11 72.4 63 54.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 7.4e-08 61.6 52 55.8


User provided reference genes

Program Settings