Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001053 Vanilla planifolia HOM05D004746 ORTHO05D005863 2.1e-205 718.8 362 100.0
HPP92_001120 Vanilla planifolia HOM05D004746 ORTHO05D005863 8.2e-157 557.4 334 86.2
MBI01_g40022_MAGBIO Magnolia biondii HOM05D004746 ORTHO05D005863 4.8e-141 505.0 389 65.8
Aqoxy7G03079 Aquilegia oxysepala HOM05D004746 ORTHO05D005863 2.2e-133 479.6 389 64.0
PSO339G1342 Papaver somniferum HOM05D004746 ORTHO05D005863 7.0e-132 474.6 389 63.2
Zm00001eb111960 Zea mays HOM05D004746 ORTHO05D005863 5.9e-131 471.5 389 60.9
Manes.09G106500 Manihot esculenta HOM05D004746 ORTHO05D005863 7.8e-131 471.1 389 62.7
CDE08G1427 Ceratophyllum demersum HOM05D004746 ORTHO05D005863 1.7e-130 469.9 389 61.4
Gohir.A01G226580 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.7e-130 469.9 389 63.2
PSO801G0820 Papaver somniferum HOM05D004746 ORTHO05D005863 6.6e-130 468.0 389 62.5
Gohir.D04G132800 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.9e-129 466.5 389 62.2
THA.LOC104823290 Tarenaya hassleriana HOM05D004746 ORTHO05D005863 1.9e-129 466.5 389 62.2
FvH4_4g00010 Fragaria vesca HOM05D004746 ORTHO05D005863 9.5e-129 464.2 389 62.7
ATR0681G361 Amborella trichopoda HOM05D004746 ORTHO05D005863 1.2e-128 463.8 389 59.6
EL10Ac5g12532 Beta vulgaris HOM05D004746 ORTHO05D005863 1.2e-128 463.8 387 61.2
Duzib093G0324 Durio zibethinus HOM05D004746 ORTHO05D005863 1.2e-128 463.8 389 61.7
Cpa.g.sc120.53 Carica papaya HOM05D004746 ORTHO05D005863 1.6e-128 463.4 387 62.5
Thecc.05G012200 Theobroma cacao HOM05D004746 ORTHO05D005863 1.6e-128 463.4 389 62.2
BolC3t16657H Brassica oleracea HOM05D004746 ORTHO05D005863 2.1e-128 463.0 389 61.2
Potri.016G119900 Populus trichocarpa HOM05D004746 ORTHO05D005863 2.1e-128 463.0 389 62.7
CARHR083300 Cardamine hirsuta HOM05D004746 ORTHO05D005863 2.8e-128 462.6 389 61.4
Gohir.A04G093500 Gossypium hirsutum HOM05D004746 ORTHO05D005863 2.8e-128 462.6 389 61.7
Carub.0003s0809 Capsella rubella HOM05D004746 ORTHO05D005863 3.6e-128 462.2 389 61.4
Gorai.012G116700 Gossypium raimondii HOM05D004746 ORTHO05D005863 4.7e-128 461.8 389 61.4
A05p39880 Brassica napus HOM05D004746 ORTHO05D005863 6.1e-128 461.5 389 61.4
C05p58920 Brassica napus HOM05D004746 ORTHO05D005863 6.1e-128 461.5 389 61.4
BolC5t34545H Brassica oleracea HOM05D004746 ORTHO05D005863 6.1e-128 461.5 389 61.4
BraA03t12796Z Brassica rapa HOM05D004746 ORTHO05D005863 6.1e-128 461.5 389 60.9
AT3G08960 Arabidopsis thaliana HOM05D004746 ORTHO05D005863 8.0e-128 461.1 389 60.9
Thhalv10019980m.g Eutrema salsugineum HOM05D004746 ORTHO05D005863 8.0e-128 461.1 389 60.7
AL3G19980 Arabidopsis lyrata HOM05D004746 ORTHO05D005863 1.0e-127 460.7 389 60.9
C03p43890 Brassica napus HOM05D004746 ORTHO05D005863 1.0e-127 460.7 389 60.9
Gorai.002G262500 Gossypium raimondii HOM05D004746 ORTHO05D005863 1.4e-127 460.3 389 62.2
CiPaw.09G211600 Carya illinoinensis HOM05D004746 ORTHO05D005863 2.3e-127 459.5 347 67.4
Duzib128G0341 Durio zibethinus HOM05D004746 ORTHO05D005863 2.3e-127 459.5 389 60.7
Nn2g10907 Nelumbo nucifera HOM05D004746 ORTHO05D005863 2.3e-127 459.5 389 62.5
A03p36250 Brassica napus HOM05D004746 ORTHO05D005863 3.0e-127 459.1 389 60.4
Ciclev10010971m.g Citrus clementina HOM05D004746 ORTHO05D005863 3.0e-127 459.1 389 60.7
BraSC256t45936Z Brassica rapa HOM05D004746 ORTHO05D005863 4.0e-127 458.8 389 61.2
Hund10978 Selenicereus undatus HOM05D004746 ORTHO05D005863 4.0e-127 458.8 387 60.7
Aa31LG5G18930 Aethionema arabicum HOM05D004746 ORTHO05D005863 5.2e-127 458.4 389 60.7
Eucgr.A00543 Eucalyptus grandis HOM05D004746 ORTHO05D005863 6.8e-127 458.0 389 60.9
Atru.chr8.2277 Acer truncatum HOM05D004746 ORTHO05D005863 1.5e-126 456.8 389 60.4
Sc01g0006870 Simmondsia chinensis HOM05D004746 ORTHO05D005863 1.5e-126 456.8 387 60.2
arahy.Tifrunner.gnm1.ann1.R9K5QN Arachis hypogaea HOM05D004746 ORTHO05D005863 2.0e-126 456.4 389 60.2
AUR62010444 Chenopodium quinoa HOM05D004746 ORTHO05D005863 2.6e-126 456.1 387 60.2
Lj1g0027952 Lotus japonicus HOM05D004746 ORTHO05D005863 2.6e-126 456.1 389 60.2
TWI74G1023 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 5.7e-126 454.9 389 60.2
Glyma.07G152800 Glycine max HOM05D004746 ORTHO05D005863 2.2e-125 453.0 390 59.0
Lalb_Chr19g0124371 Lupinus albus HOM05D004746 ORTHO05D005863 4.9e-125 451.8 389 60.7
PGR031G3962 Punica granatum HOM05D004746 ORTHO05D005863 4.9e-125 451.8 389 60.2
CsaV3_3G021150 Cucumis sativus L. HOM05D004746 ORTHO05D005863 6.4e-125 451.4 389 59.4
Glyma.18G203900 Glycine max HOM05D004746 ORTHO05D005863 6.4e-125 451.4 390 59.2
Sed0023855 Sechium edule HOM05D004746 ORTHO05D005863 6.4e-125 451.4 389 59.1
Sp3g07380 Schrenkiella parvula HOM05D004746 ORTHO05D005863 8.3e-125 451.1 389 59.6
Phvul.008G095700 Phaseolus vulgaris HOM05D004746 ORTHO05D005863 2.4e-124 449.5 390 59.0
CANSAT56G3938 Cannabis sativa HOM05D004746 ORTHO05D005863 7.0e-124 448.0 389 60.4
Cfa017175 Carpinus fangiana HOM05D004746 ORTHO05D005863 9.2e-124 447.6 389 60.7
MELO3C020253.2 Cucumis melo HOM05D004746 ORTHO05D005863 1.2e-123 447.2 389 59.4
VMungo1383G1310 Vigna mungo HOM05D004746 ORTHO05D005863 1.2e-123 447.2 390 58.7
Psat3g125960 Pisum sativum HOM05D004746 ORTHO05D005863 1.6e-123 446.8 389 59.6
CSS0006394 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 2.7e-123 446.0 389 60.4
CSS0013285 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 2.7e-123 446.0 389 60.4
Dinv13139 Davidia involucrata HOM05D004746 ORTHO05D005863 2.7e-123 446.0 389 60.4
QL07p034923 Quercus lobata HOM05D004746 ORTHO05D005863 3.5e-123 445.7 389 59.6
Sabra16G0115800 Salix brachista HOM05D004746 ORTHO05D005863 5.9e-123 444.9 416 58.2
TPR.G35441 Trifolium pratense HOM05D004746 ORTHO05D005863 7.8e-123 444.5 389 59.1
Medtr7g069460 Medicago truncatula HOM05D004746 ORTHO05D005863 1.0e-122 444.1 389 59.1
FAN17G1409 Fragaria x ananassa HOM05D004746 ORTHO05D005863 1.7e-122 443.4 387 60.7
FAN22G0460 Fragaria x ananassa HOM05D004746 ORTHO05D005863 1.7e-122 443.4 387 60.7
Ca_07663_v3 Cicer arietinum L. HOM05D004746 ORTHO05D005863 6.6e-122 441.4 389 58.9
Actinidia11569 Actinidia chinensis HOM05D004746 ORTHO05D005863 3.3e-121 439.1 389 58.9
vmacro20299 Vaccinium macrocarpon HOM05D004746 ORTHO05D005863 3.3e-121 439.1 389 59.6
Nitab4.5_0000195g0230 Nicotiana tabacum HOM05D004746 ORTHO05D005863 5.6e-121 438.3 374 61.2
Oeu033576.1 Olea europaea HOM05D004746 ORTHO05D005863 5.6e-121 438.3 389 58.9
Haze_21030 Corylus avellana HOM05D004746 ORTHO05D005863 7.3e-121 438.0 388 60.3
arahy.Tifrunner.gnm1.ann1.U1NNDF Arachis hypogaea HOM05D004746 ORTHO05D005863 1.6e-120 436.8 389 58.6
AUR62030473 Chenopodium quinoa HOM05D004746 ORTHO05D005863 4.7e-120 435.3 393 57.5
Oeu063393.2 Olea europaea HOM05D004746 ORTHO05D005863 8.0e-120 434.5 400 57.5
Sopen09g001110 Solanum pennellii HOM05D004746 ORTHO05D005863 8.0e-120 434.5 389 58.9
Migut.J00134 Erythranthe guttata HOM05D004746 ORTHO05D005863 5.2e-119 431.8 389 58.1
Nitab4.5_0009417g0010 Nicotiana tabacum HOM05D004746 ORTHO05D005863 1.5e-118 430.3 379 59.9
Gohir.D01G216252 Gossypium hirsutum HOM05D004746 ORTHO05D005863 2.0e-118 429.9 389 59.4
Lsat_1_v5_gn_8_100840 Lactuca sativa HOM05D004746 ORTHO05D005863 5.8e-118 428.3 387 58.7
HanXRQChr12g0383171 Helianthus annuus HOM05D004746 ORTHO05D005863 7.5e-118 427.9 387 58.4
Peaxi162Scf01132g00141 Petunia axillaris HOM05D004746 ORTHO05D005863 2.9e-117 426.0 368 59.5
DCAR_015390 Daucus carota HOM05D004746 ORTHO05D005863 4.9e-117 425.2 389 58.4
Cc06_g01090 Coffea canephora HOM05D004746 ORTHO05D005863 4.1e-116 422.2 389 56.3
MSTRG.10207 Avicennia marina HOM05D004746 ORTHO05D005863 5.4e-116 421.8 389 56.8
ECA236G1680 Erigeron canadensis HOM05D004746 ORTHO05D005863 7.0e-116 421.4 387 57.4
Ah.02g115550 Amaranthus hybridus HOM05D004746 ORTHO05D005863 6.0e-115 418.3 401 56.1
SGA_v2.0_scaffold85G26719 Striga asiatica HOM05D004746 ORTHO05D005863 1.7e-114 416.8 386 56.7
Actinidia29088 Actinidia chinensis HOM05D004746 ORTHO05D005863 9.5e-113 411.0 389 57.1
DCAR_018683 Daucus carota HOM05D004746 ORTHO05D005863 1.2e-112 410.6 422 54.0
Lj3C949T2 Lonicera japonica HOM05D004746 ORTHO05D005863 3.1e-111 406.0 474 48.9
Gohir.D01G216126 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.7e-109 400.2 373 57.9
SEGI_16247 Sequoiadendron giganteum HOM05D004746 ORTHO05D005863 2.2e-109 399.8 389 52.4
TWI77G0319 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 1.1e-105 387.5 402 54.0
unitig_26.g9084 Utricularia gibba HOM05D004746 ORTHO05D005863 1.7e-101 373.6 394 51.0
Mapoly0056s0005 Marchantia polymorpha HOM05D004746 ORTHO05D005863 8.4e-93 344.7 393 43.8
Os07g0693400 Oryza sativa ssp. japonica HOM05D004746 ORTHO05D005863 4.3e-89 332.4 392 49.2
Pp3c2_22550 Physcomitrium patens HOM05D004746 ORTHO05D005863 7.3e-89 331.6 392 43.9
Pp3c14_210 Physcomitrium patens HOM05D004746 ORTHO05D005863 6.9e-87 325.1 393 43.3
TAR633G1894 Trochodendron aralioides HOM05D004746 ORTHO05D005863 5.4e-84 315.5 207 73.4
GSVIVG01003936001 Vitis vinifera HOM05D004746 ORTHO05D005863 2.7e-83 313.2 285 59.6
Prupe.1G000100 Prunus persica HOM05D004746 ORTHO05D005863 8.7e-82 308.1 213 70.0
SMO232G0101 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 4.3e-81 305.8 401 39.7
MD04G1000200 Malus domestica HOM05D004746 ORTHO05D005863 5.6e-81 305.4 207 70.5
BcaC01g04209 Brassica carinata HOM05D004746 ORTHO05D005863 1.4e-79 300.8 389 45.5
SMO241G0033 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 1.4e-79 300.8 403 39.2
AagrBONN_evm.TU.Sc2ySwM_362.215 Anthoceros agrestis HOM05D004746 ORTHO05D005863 1.5e-78 297.4 393 40.2
BcaC05g29630 Brassica carinata HOM05D004746 ORTHO05D005863 7.6e-78 295.0 389 46.0
ClCG05G011310 Citrullus lanatus HOM05D004746 ORTHO05D005863 7.4e-57 225.3 278 46.8
CBR_g44564 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-52 211.5 308 38.6
ClCG05G011300 Citrullus lanatus HOM05D004746 ORTHO05D005863 3.2e-52 209.9 142 71.1
Dinv16905 Davidia involucrata HOM05D004746 ORTHO05D005863 4.1e-47 193.0 133 69.2
PRCOL_00000669 Prasinoderma coloniale HOM05D004746 ORTHO05D005863 1.0e-45 188.3 397 32.2
GSVIVG01003938001 Vitis vinifera HOM05D004746 ORTHO05D005863 5.0e-37 159.5 104 73.1
Prupe.1G000300 Prunus persica HOM05D004746 ORTHO05D005863 8.5e-37 158.7 115 67.0
COL.COLO4_14503 Corchorus olitorius HOM05D004746 ORTHO05D005863 1.1e-36 158.3 109 68.8
FAN12G3124 Fragaria x ananassa HOM05D004746 ORTHO05D005863 3.2e-36 156.8 103 72.8
MD04G1000400 Malus domestica HOM05D004746 ORTHO05D005863 4.2e-36 156.4 115 65.2
Dinv16904 Davidia involucrata HOM05D004746 ORTHO05D005863 2.0e-30 137.5 108 64.8
Glyma.16G097102 Glycine max HOM05D004746 ORTHO05D005863 7.2e-28 129.0 93 66.7
COL.COLO4_14504 Corchorus olitorius HOM05D004746 ORTHO05D005863 8.0e-27 125.6 88 68.2
Glyma.16G097152 Glycine max HOM05D004746 ORTHO05D005863 8.8e-26 122.1 92 62.0
Cre02.g078885 Chlamydomonas reinhardtii HOM05D004746 ORTHO05D005863 5.7e-25 119.4 245 32.2
PGSC0003DMG400006259 Solanum tuberosum HOM05D004746 ORTHO05D005863 5.7e-25 119.4 90 64.4
Psat2g043480 Pisum sativum HOM05D004746 ORTHO05D005863 1.7e-24 117.9 92 63.0
MD14G1122700 Malus domestica HOM05D000325 ORTHO05D001655 3.3e-12 77.0 59 61.0
CBR_g44565 Chara braunii HOM05D004746 ORTHO05D001702 3.4e-09 67.0 56 46.4
Zm00001eb184170 Zea mays HOM05D005341 ORTHO05D006712 2.4e-07 60.8 47 55.3


User provided reference genes

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