Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.2e-86 323.2 172 100.0
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 2.3e-64 249.2 172 75.0
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.6e-64 247.3 172 74.4
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.6e-64 247.3 172 74.4
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.1e-63 246.9 171 76.0
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 1.9e-63 246.1 172 75.6
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 2.5e-63 245.7 172 74.4
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 4.3e-63 245.0 172 73.8
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 5.6e-63 244.6 172 73.8
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 5.6e-63 244.6 172 75.0
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 7.3e-63 244.2 172 74.4
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 7.3e-63 244.2 172 75.0
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 7.3e-63 244.2 173 74.6
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 9.6e-63 243.8 172 73.8
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 3.6e-62 241.9 172 73.3
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 6.2e-62 241.1 172 75.0
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 8.1e-62 240.7 172 72.7
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.1e-61 240.4 172 72.1
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.1e-61 240.4 172 74.4
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 2.4e-61 239.2 172 72.7
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.4e-61 239.2 172 72.7
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 3.1e-61 238.8 172 72.1
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 6.9e-61 237.7 172 73.3
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 6.9e-61 237.7 174 73.0
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 9.0e-61 237.3 173 72.8
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.2e-60 236.9 173 72.3
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.2e-60 236.9 172 70.3
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.6e-60 235.7 173 72.8
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.6e-60 235.7 172 72.7
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.4e-60 235.3 172 70.9
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 4.4e-60 235.0 173 72.8
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 5.8e-60 234.6 172 70.9
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 7.6e-60 234.2 172 69.8
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 9.9e-60 233.8 167 71.9
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 9.9e-60 233.8 172 71.5
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.3e-59 233.4 174 70.7
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.7e-59 233.0 172 70.9
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 2.2e-59 232.6 172 70.9
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 2.9e-59 232.3 174 70.1
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.9e-59 232.3 174 70.1
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 4.9e-59 231.5 172 69.8
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 6.4e-59 231.1 172 69.8
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 6.4e-59 231.1 170 71.8
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 6.4e-59 231.1 168 73.2
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.1e-58 230.3 172 70.3
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.1e-58 230.3 172 69.2
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 1.1e-58 230.3 173 71.7
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.4e-58 229.9 172 72.1
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.9e-58 229.6 181 67.4
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.4e-58 229.2 173 72.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.2e-58 228.8 180 68.3
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 3.2e-58 228.8 172 70.9
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 7.1e-58 227.6 172 68.6
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 69.9
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.2e-57 226.9 173 68.8
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 2.1e-57 226.1 169 68.0
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 3.5e-57 225.3 173 71.1
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 4.6e-57 224.9 173 69.4
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.7e-56 223.0 193 64.2
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.3e-56 222.6 172 69.2
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 3.9e-56 221.9 172 66.9
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.6e-54 216.5 150 76.0
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 2.8e-54 215.7 173 67.6
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 6.2e-54 214.5 173 66.5
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 8.1e-54 214.2 173 66.5
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 8.1e-54 214.2 173 67.1
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 8.1e-54 214.2 173 65.3
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 2.4e-53 212.6 173 66.5
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.1e-53 212.2 149 75.8
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 3.1e-53 212.2 173 65.9
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 6.9e-53 211.1 173 65.3
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 9.0e-53 210.7 173 65.3
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.2e-52 210.3 166 67.5
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 2.6e-52 209.1 173 65.3
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 4.5e-52 208.4 149 75.8
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 7.6e-52 207.6 173 65.3
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.3e-51 206.8 144 76.4
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.1e-50 203.8 144 73.6
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 2.4e-50 202.6 143 72.0
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 3.2e-50 202.2 150 72.0
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.6e-49 199.9 144 74.3
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 2.1e-49 199.5 165 61.2
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 6.7e-48 194.5 150 70.0
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 8.7e-48 194.1 143 69.9
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.5e-47 193.4 173 57.8
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 2.5e-47 192.6 173 64.2
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 2.5e-47 192.6 144 69.4
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 4.3e-47 191.8 141 74.5
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 7.4e-47 191.0 172 59.9
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.3e-46 190.3 142 70.4
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.1e-46 189.5 172 61.0
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 2.8e-46 189.1 165 60.6
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.4e-45 186.8 175 54.9
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.3e-43 180.3 172 59.9
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.5e-41 172.2 165 56.4
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.9e-40 168.7 172 56.4
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.2e-36 157.1 120 68.3
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 2.5e-34 149.4 144 60.4
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.2e-34 148.7 121 62.8
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 5.5e-34 148.3 111 69.4
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 1.5e-31 140.2 112 67.9
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 1.9e-31 139.8 123 61.8
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 4.3e-31 138.7 139 62.6
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 3.1e-29 132.5 133 57.9
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 5.0e-27 125.2 99 68.7
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.4e-26 123.6 165 41.2
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.9e-24 115.5 167 47.3
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.5e-23 113.6 89 66.3
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 3.3e-23 112.5 160 38.8
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 9.7e-23 110.9 87 65.5
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 9.7e-23 110.9 183 39.9
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 6.3e-22 108.2 104 55.8
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 2.4e-21 106.3 86 65.1
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 6.9e-21 104.8 99 57.6
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.2e-20 104.0 120 52.5
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.5e-20 103.6 95 61.1
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 5.9e-20 101.7 128 48.4
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 2.5e-18 96.3 86 66.3
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.6e-17 92.4 71 69.0
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.0e-16 89.4 104 51.0
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 5.3e-13 78.6 115 43.5
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-11 73.9 58 69.0
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 2.2e-11 73.2 63 65.1
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 9.4e-10 67.8 59 62.7
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.6e-09 65.9 63 52.4
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 8.0e-09 64.7 83 49.4
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.8e-08 63.5 58 55.2
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 2.3e-08 63.2 86 44.2
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.3e-06 57.4 47 59.6


User provided reference genes

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