Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 6.9e-108 394.0 207 100.0
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 2.0e-78 296.2 159 97.5
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 5.6e-33 145.2 126 60.3
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 7.3e-33 144.8 125 60.8
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.3e-31 139.8 155 55.5
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 2.0e-30 136.7 97 72.2
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 2.6e-30 136.3 130 57.7
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 3.4e-30 136.0 95 74.7
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 4.4e-30 135.6 95 73.7
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 7.5e-30 134.8 134 59.0
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 9.8e-30 134.4 111 67.6
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.3e-29 134.0 111 67.6
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 1.3e-29 134.0 93 77.4
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.7e-29 133.7 103 71.8
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 1.7e-29 133.7 90 68.9
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 1.7e-29 133.7 112 69.6
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 2.9e-29 132.9 133 58.6
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.9e-29 132.9 114 57.9
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 4.9e-29 132.1 111 63.1
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 4.9e-29 132.1 139 52.5
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 8.3e-29 131.3 94 73.4
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 8.3e-29 131.3 95 73.7
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 1.4e-28 130.6 115 68.7
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 1.9e-28 130.2 154 55.2
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 9.2e-28 127.9 83 71.1
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.2e-27 127.5 86 68.6
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 1.2e-27 127.5 201 43.8
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.2e-27 127.5 97 74.2
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.7e-27 126.3 83 69.9
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 3.5e-27 125.9 93 71.0
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 4.6e-27 125.6 85 68.2
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 4.6e-27 125.6 123 54.5
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 7.8e-27 124.8 136 51.5
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 7.8e-27 124.8 126 55.6
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 1.3e-26 124.0 93 65.6
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 2.3e-26 123.2 115 53.9
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 3.0e-26 122.9 85 67.1
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.9e-26 122.5 86 66.3
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.9e-26 122.5 86 69.8
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 6.6e-26 121.7 121 48.8
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 1.5e-25 120.6 151 51.7
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 1.9e-25 120.2 109 65.1
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 3.3e-25 119.4 115 61.7
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 3.3e-25 119.4 94 61.7
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 5.6e-25 118.6 112 61.6
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 5.6e-25 118.6 169 50.9
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 5.6e-25 118.6 78 67.9
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 5.6e-25 118.6 140 47.1
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 7.3e-25 118.2 106 55.7
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 7.3e-25 118.2 93 63.4
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 1.2e-24 117.5 118 48.3
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.2e-24 117.5 146 47.3
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 1.6e-24 117.1 126 51.6
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 2.1e-24 116.7 106 53.8
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 2.8e-24 116.3 111 61.3
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 2.8e-24 116.3 89 60.7
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.6e-24 115.9 93 60.2
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 4.7e-24 115.5 138 46.4
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 4.7e-24 115.5 145 47.6
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 6.2e-24 115.2 115 64.3
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 6.2e-24 115.2 111 62.2
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 6.2e-24 115.2 106 54.7
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 6.2e-24 115.2 89 65.2
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 1.1e-23 114.4 153 51.0
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 1.1e-23 114.4 106 52.8
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 1.1e-23 114.4 85 65.9
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.1e-23 114.4 143 46.2
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 1.4e-23 114.0 114 56.1
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.4e-23 114.0 89 60.7
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.8e-23 113.6 134 49.3
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 1.8e-23 113.6 109 62.4
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 2.3e-23 113.2 139 51.1
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 3.1e-23 112.8 136 47.1
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 4.0e-23 112.5 111 59.5
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 4.0e-23 112.5 111 59.5
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 4.0e-23 112.5 111 59.5
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 4.0e-23 112.5 111 59.5
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 4.0e-23 112.5 104 63.5
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 4.0e-23 112.5 106 50.9
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 5.2e-23 112.1 149 47.7
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 6.8e-23 111.7 111 59.5
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 6.8e-23 111.7 106 63.2
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 6.8e-23 111.7 81 63.0
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 8.9e-23 111.3 108 51.9
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 8.9e-23 111.3 111 59.5
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 8.9e-23 111.3 87 59.8
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 8.9e-23 111.3 88 62.5
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 1.2e-22 110.9 74 67.6
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.2e-22 110.9 111 58.6
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 1.2e-22 110.9 82 61.0
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 1.2e-22 110.9 95 66.3
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.5e-22 110.5 95 65.3
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 1.5e-22 110.5 95 65.3
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.5e-22 110.5 88 62.5
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 2.0e-22 110.2 102 59.8
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 2.0e-22 110.2 111 58.6
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 2.0e-22 110.2 104 63.5
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.4e-22 109.0 72 70.8
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 4.4e-22 109.0 89 59.6
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 4.4e-22 109.0 72 63.9
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 5.8e-22 108.6 117 59.8
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 5.8e-22 108.6 126 53.2
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 5.8e-22 108.6 161 44.7
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.7e-21 107.1 136 47.1
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 2.9e-21 106.3 74 64.9
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 2.9e-21 106.3 137 43.1
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 3.7e-21 105.9 96 53.1
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 3.7e-21 105.9 142 43.7
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 6.4e-21 105.1 149 47.0
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 5.4e-20 102.1 71 60.6
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 9.2e-20 101.3 134 41.8
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 1.2e-19 100.9 82 59.8
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 3.5e-19 99.4 109 48.6
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 4.6e-19 99.0 85 55.3
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.1e-17 94.4 81 61.7
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 4.3e-17 92.4 106 48.1
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 4.3e-17 92.4 95 61.1
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.7e-16 89.0 145 38.6
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.2e-16 88.6 143 39.9
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 3.1e-15 86.3 99 44.4
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 4.0e-15 85.9 93 48.4
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 8.9e-15 84.7 88 51.1
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 4.4e-14 82.4 64 70.3
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 1.7e-13 80.5 85 49.4
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.9e-12 77.0 81 55.6
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.9e-12 77.0 81 55.6
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 7.8e-11 71.6 66 51.5
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 7.8e-11 71.6 66 51.5
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 3.0e-10 69.7 67 50.7
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 3.9e-10 69.3 48 60.4
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.9e-09 67.0 60 51.7
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 3.3e-09 66.2 50 62.0
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 3.3e-09 66.2 59 54.2
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 4.7e-08 62.4 95 41.1


User provided reference genes

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