Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 1.5e-258 896.0 540 100.0
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 3.0e-240 835.1 526 96.8
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 2.0e-119 433.7 550 54.0
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 6.0e-119 432.2 528 54.9
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.6e-116 424.1 552 53.3
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.8e-115 420.6 530 54.0
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 8.3e-113 411.8 536 52.4
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.3e-110 404.4 535 54.6
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 3.9e-110 402.9 526 52.5
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 6.6e-110 402.1 527 52.6
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 1.9e-109 400.6 536 55.0
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 4.3e-109 399.4 524 55.7
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 2.1e-108 397.1 544 53.9
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 6.2e-108 395.6 507 53.3
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 6.2e-108 395.6 525 52.4
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 8.1e-108 395.2 550 50.0
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 8.1e-108 395.2 547 55.0
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 1.1e-107 394.8 534 57.3
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-107 394.8 529 56.9
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 1.8e-107 394.0 520 51.7
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 2.3e-107 393.7 552 49.6
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 3.1e-107 393.3 305 72.5
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 4.0e-107 392.9 537 51.4
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 5.2e-107 392.5 524 51.1
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 6.8e-107 392.1 520 56.3
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 8.9e-107 391.7 525 52.4
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.2e-106 391.3 522 53.4
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 1.2e-106 391.3 543 52.7
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 2.6e-106 390.2 308 71.4
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 5.8e-106 389.0 525 53.5
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 7.5e-106 388.7 524 52.9
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 7.5e-106 388.7 527 51.8
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 7.5e-106 388.7 521 56.6
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 7.5e-106 388.7 535 55.1
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.3e-105 387.9 554 50.7
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 1.3e-105 387.9 519 56.8
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 1.7e-105 387.5 513 52.0
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 1.7e-105 387.5 306 72.2
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 3.7e-105 386.3 521 53.4
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 6.4e-105 385.6 529 53.1
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 6.4e-105 385.6 547 50.8
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.4e-104 384.4 312 69.6
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.4e-104 384.4 310 70.6
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.2e-104 383.3 522 52.5
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 4.1e-104 382.9 529 51.0
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 4.1e-104 382.9 480 53.3
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 5.4e-104 382.5 522 55.6
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 9.2e-104 381.7 533 50.5
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 1.6e-103 380.9 536 50.7
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.7e-103 380.2 512 51.8
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 3.5e-103 379.8 531 51.0
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 1.0e-102 378.3 549 54.1
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.7e-102 377.5 476 57.4
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.3e-102 377.1 523 54.7
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 2.3e-102 377.1 521 55.9
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 3.9e-102 376.3 523 55.1
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.9e-102 376.3 523 55.1
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 3.9e-102 376.3 528 49.2
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 1.1e-101 374.8 544 49.3
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 1.9e-101 374.0 466 56.7
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 2.5e-101 373.6 528 54.5
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 5.6e-101 372.5 511 52.4
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.6e-100 370.9 301 69.8
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 8.1e-100 368.6 498 51.0
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 1.8e-99 367.5 463 54.0
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 1.8e-99 367.5 532 52.3
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 2.4e-99 367.1 510 53.5
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 5.2e-99 365.9 530 50.8
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.2e-98 364.8 540 50.0
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.5e-98 364.4 513 49.3
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 1.5e-98 364.4 544 53.9
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 2.6e-98 363.6 517 50.7
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 1.7e-97 360.9 520 51.3
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 1.1e-96 358.2 513 52.8
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 3.2e-96 356.7 544 51.3
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 5.4e-96 355.9 530 47.7
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 5.4e-96 355.9 265 75.5
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 7.1e-96 355.5 557 51.3
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 9.2e-96 355.1 532 48.5
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 1.6e-95 354.4 521 48.6
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 3.5e-95 353.2 556 46.9
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 1.0e-94 351.7 488 52.3
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 3.0e-94 350.1 537 51.0
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 3.9e-94 349.7 537 43.8
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 6.6e-94 349.0 532 48.9
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 6.6e-94 349.0 521 50.3
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.1e-93 348.2 525 48.6
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 1.5e-93 347.8 532 51.7
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 5.3e-91 339.3 517 47.4
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 2.9e-89 333.6 532 45.9
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 4.9e-89 332.8 263 71.5
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.3e-86 324.7 508 47.6
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 5.1e-86 322.8 243 74.9
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 6.6e-86 322.4 522 42.7
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 4.3e-85 319.7 306 62.1
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 5.3e-83 312.8 454 52.9
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 4.9e-81 306.2 308 59.7
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 1.2e-79 301.6 565 50.1
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.1e-75 288.5 514 44.4
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 6.4e-73 279.3 511 39.5
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.9e-69 267.7 524 41.2
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 2.4e-67 260.8 506 41.5
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 1.5e-58 231.5 543 42.5
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 5.5e-56 223.0 364 43.1
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 9.7e-53 212.2 540 38.0
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 1.3e-44 185.3 514 33.1
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 1.7e-41 174.9 123 62.6
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 2.2e-41 174.5 278 35.6
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 5.5e-40 169.9 119 63.0
VMungo1309G0832 Vigna mungo HOM05D004072 ORTHO05D005933 1.8e-30 138.3 400 41.0
Hma1.2p1_1600F.1_g293130 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 5.2e-22 110.2 63 84.1
CSS0009414 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.0e-18 98.2 61 73.8
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.1e-16 92.4 65 60.0
Cpa.g.sc17.83 Carica papaya HOM05D004072 ORTHO05D005933 1.4e-14 85.5 80 45.0
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 7.0e-11 73.2 256 32.0
Duzib248G0875 Durio zibethinus HOM05D000121 ORTHO05D000102 6.8e-06 56.6 49 59.2


User provided reference genes

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