Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.7e-62 240.4 125 100.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 7.7e-46 187.2 122 73.8
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.7e-45 186.0 122 73.8
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 2.2e-45 185.7 122 73.8
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 5.0e-45 184.5 122 73.8
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 6.5e-45 184.1 122 73.8
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 1.5e-44 183.0 122 74.6
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 2.5e-44 182.2 118 75.4
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.5e-44 182.2 122 77.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 3.2e-44 181.8 122 73.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 5.5e-44 181.0 120 73.3
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.2e-43 179.9 124 71.0
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 1.6e-43 179.5 122 71.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.6e-43 179.5 122 70.5
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.1e-43 179.1 122 70.5
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 2.7e-43 178.7 122 72.1
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 6.1e-43 177.6 118 73.7
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.1e-43 177.6 122 72.1
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 8.0e-43 177.2 122 70.5
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.0e-42 176.8 122 69.7
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 1.4e-42 176.4 123 72.4
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.4e-42 176.4 122 69.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.8e-42 176.0 122 73.8
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.8e-42 176.0 120 73.3
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.3e-42 175.6 122 69.7
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 2.3e-42 175.6 122 70.5
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 3.0e-42 175.3 123 71.5
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 4.0e-42 174.9 120 72.5
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 4.0e-42 174.9 120 72.5
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 4.0e-42 174.9 122 71.3
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 5.2e-42 174.5 122 68.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 6.8e-42 174.1 118 71.2
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 6.8e-42 174.1 120 72.5
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 6.8e-42 174.1 120 72.5
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.5e-41 172.9 118 73.7
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.0e-41 172.6 123 70.7
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.4e-41 171.8 122 71.3
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.7e-41 171.0 121 70.2
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 7.5e-41 170.6 121 70.2
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.5e-41 170.6 119 71.4
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 7.5e-41 170.6 122 67.2
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 9.8e-41 170.2 121 70.2
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.2e-40 169.1 120 71.7
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 3.7e-40 168.3 118 67.8
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 4.8e-40 167.9 118 67.8
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.3e-40 167.5 119 69.7
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 6.3e-40 167.5 118 70.3
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 8.3e-40 167.2 122 66.4
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 8.3e-40 167.2 122 67.2
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-39 166.4 123 66.7
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-39 166.4 123 66.7
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 3.1e-39 165.2 154 58.4
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.1e-39 164.9 120 66.7
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 4.1e-39 164.9 113 69.9
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 4.1e-39 164.9 118 70.3
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 4.1e-39 164.9 125 65.6
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 4.1e-39 164.9 122 68.0
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.4e-39 164.5 120 66.7
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 7.0e-39 164.1 110 71.8
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 9.1e-39 163.7 123 66.7
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 9.1e-39 163.7 116 67.2
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.2e-38 163.3 121 65.3
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.2e-38 163.3 118 69.5
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.6e-38 162.9 122 67.2
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 1.6e-38 162.9 117 66.7
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.6e-38 162.9 117 65.8
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 2.0e-38 162.5 117 65.8
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 2.0e-38 162.5 115 67.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 2.7e-38 162.2 117 64.1
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 3.5e-38 161.8 117 65.0
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 3.5e-38 161.8 117 65.0
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 5.9e-38 161.0 117 65.0
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 5.9e-38 161.0 117 65.0
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 5.9e-38 161.0 117 65.0
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 7.7e-38 160.6 103 72.8
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.0e-37 160.2 117 65.0
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.3e-37 159.8 139 58.3
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.3e-37 159.8 122 65.6
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.7e-37 159.5 120 65.8
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 2.3e-37 159.1 122 61.5
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.9e-37 158.7 118 64.4
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 5.0e-37 157.9 117 63.2
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 1.1e-36 156.8 118 63.6
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 1.1e-36 156.8 118 63.6
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.1e-36 156.8 121 61.2
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.5e-36 156.4 120 61.7
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 1.9e-36 156.0 122 62.3
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 5.5e-36 154.5 122 63.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 9.5e-36 153.7 115 64.3
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 7.5e-33 144.1 99 68.7
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.4e-31 139.0 104 64.4
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 4.1e-31 138.3 90 75.6
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 7.0e-31 137.5 100 66.0
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 9.2e-31 137.1 89 75.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 8.6e-29 130.6 90 70.0
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 1.1e-28 130.2 172 42.4
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 1.9e-28 129.4 93 71.0
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 9.5e-28 127.1 88 70.5
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.6e-27 126.3 87 72.4
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.6e-27 126.3 89 70.8
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.6e-27 126.3 86 72.1
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 1.6e-27 126.3 96 65.6
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 8.0e-27 124.0 85 68.2
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 8.0e-27 124.0 122 54.1
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.3e-26 122.5 115 53.0
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 3.0e-26 122.1 115 51.3
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.0e-26 122.1 98 60.2
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 3.7e-24 115.2 96 62.5
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-20 103.2 83 59.0
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 2.5e-20 102.4 105 44.8
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.8e-18 96.3 120 45.0
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 2.0e-17 92.8 54 81.5
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.2e-09 67.0 120 36.7


User provided reference genes

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