Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000957 Vanilla planifolia HOM05D000860 ORTHO05D005731 2.0e-116 422.5 225 100.0
PSO541G0433 Papaver somniferum HOM05D000860 ORTHO05D026722 5.5e-18 95.5 179 35.2
Aqoxy6G01123 Aquilegia oxysepala HOM05D000860 ORTHO05D026722 1.2e-17 94.4 131 45.8
Nn7g37700 Nelumbo nucifera HOM05D000860 ORTHO05D026722 1.6e-17 94.0 152 40.1
ATR0115G014 Amborella trichopoda HOM05D000860 ORTHO05D005731 1.8e-16 90.5 144 41.0
PSO675G9271 Papaver somniferum HOM05D000860 ORTHO05D026722 2.3e-16 90.1 152 36.8
Migut.O00631 Erythranthe guttata HOM05D000860 ORTHO05D005731 1.5e-15 87.4 154 40.3
Nn2g10774 Nelumbo nucifera HOM05D000860 ORTHO05D005731 1.3e-14 84.3 139 40.3
TAR623G0466 Trochodendron aralioides HOM05D000860 ORTHO05D005731 2.2e-14 83.6 142 40.8
SalBow3G0016 Salvia bowleyana HOM05D000860 ORTHO05D005731 4.8e-14 82.4 158 43.7
VMungo1383G0750 Vigna mungo HOM05D000860 ORTHO05D005731 4.8e-14 82.4 134 41.0
Rhsim01G0217500 Rhododendron simsii HOM05D000860 ORTHO05D005731 1.1e-13 81.3 143 40.6
MD12G1119800 Malus domestica HOM05D000860 ORTHO05D005731 1.4e-13 80.9 142 37.3
Cc01_g11220 Coffea canephora HOM05D000860 ORTHO05D005731 1.8e-13 80.5 143 41.3
MD04G1099200 Malus domestica HOM05D000860 ORTHO05D005731 4.1e-13 79.3 142 36.6
MBI10_g20798_MAGBIO Magnolia biondii HOM05D000860 ORTHO05D005731 7.0e-13 78.6 142 37.3
Manes.08G006300 Manihot esculenta HOM05D000860 ORTHO05D005731 9.1e-13 78.2 143 38.5
FvH4_6g15740 Fragaria vesca HOM05D000860 ORTHO05D005731 1.2e-12 77.8 194 30.9
FAN05G3398 Fragaria x ananassa HOM05D000860 ORTHO05D005731 1.2e-12 77.8 142 36.6
FAN14G5122 Fragaria x ananassa HOM05D000860 ORTHO05D005731 1.2e-12 77.8 194 30.9
Phvul.001G176600 Phaseolus vulgaris HOM05D000860 ORTHO05D005731 1.2e-12 77.8 133 39.8
Potri.006G128800 Populus trichocarpa HOM05D000860 ORTHO05D005731 1.2e-12 77.8 142 35.9
Sabra16G0094600 Salix brachista HOM05D000860 ORTHO05D005731 1.2e-12 77.8 143 36.4
Oeu001264.1 Olea europaea HOM05D000860 ORTHO05D005731 2.0e-12 77.0 143 39.2
Sabra06G0101400 Salix brachista HOM05D000860 ORTHO05D005731 2.0e-12 77.0 142 35.9
Gorai.013G027100 Gossypium raimondii HOM05D000860 ORTHO05D005731 2.6e-12 76.6 170 31.2
FAN02G4050 Fragaria x ananassa HOM05D000860 ORTHO05D005731 3.5e-12 76.3 142 35.9
FAN09G1893 Fragaria x ananassa HOM05D000860 ORTHO05D005731 3.5e-12 76.3 142 35.9
FAN14G4874 Fragaria x ananassa HOM05D000860 ORTHO05D005731 3.5e-12 76.3 142 35.9
Gohir.A13G025400 Gossypium hirsutum HOM05D000860 ORTHO05D005731 3.5e-12 76.3 140 33.6
RcHm_v2.0_Chr3g0469451 Rosa chinensis HOM05D000860 ORTHO05D005731 4.5e-12 75.9 142 37.3
CSS0027524 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D005731 7.7e-12 75.1 142 38.0
CSS0043489 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D005731 7.7e-12 75.1 142 38.0
MELO3C009334.2 Cucumis melo HOM05D000860 ORTHO05D005731 7.7e-12 75.1 141 37.6
Gohir.D13G024000 Gossypium hirsutum HOM05D000860 ORTHO05D005731 7.7e-12 75.1 140 33.6
Sed0021746 Sechium edule HOM05D000860 ORTHO05D005731 7.7e-12 75.1 141 36.9
ClCG10G020360 Citrullus lanatus HOM05D000860 ORTHO05D005731 1.0e-11 74.7 86 48.8
Ciclev10011672m.g Citrus clementina HOM05D000860 ORTHO05D005731 1.0e-11 74.7 141 35.5
ECA233G3204 Erigeron canadensis HOM05D000860 ORTHO05D005731 1.0e-11 74.7 86 47.7
vmacro14442 Vaccinium macrocarpon HOM05D000860 ORTHO05D005731 1.0e-11 74.7 144 38.2
COL.COLO4_27038 Corchorus olitorius HOM05D000860 ORTHO05D005731 1.7e-11 73.9 148 35.8
Glyma.19G181000 Glycine max HOM05D000860 ORTHO05D005731 1.7e-11 73.9 135 37.8
CsaV3_3G035740 Cucumis sativus L. HOM05D000860 ORTHO05D005731 2.2e-11 73.6 86 50.0
DCAR_022736 Daucus carota HOM05D000860 ORTHO05D005731 2.2e-11 73.6 143 36.4
Nitab4.5_0000650g0160 Nicotiana tabacum HOM05D000860 ORTHO05D005731 2.2e-11 73.6 150 36.0
Hma1.2p1_1031F.1_g249970 Hydrangea macrophylla HOM05D000860 ORTHO05D005731 2.9e-11 73.2 142 38.7
CiPaw.10G134300 Carya illinoinensis HOM05D000860 ORTHO05D005731 3.8e-11 72.8 143 36.4
CANSAT80G1090 Cannabis sativa HOM05D000860 ORTHO05D005731 5.0e-11 72.4 144 34.0
CAN.G631.19 Capsicum annuum HOM05D000860 ORTHO05D005731 5.0e-11 72.4 150 37.3
Prupe.6G237600 Prunus persica HOM05D000860 ORTHO05D005731 5.0e-11 72.4 142 33.8
RcHm_v2.0_Chr1g0337551 Rosa chinensis HOM05D000860 ORTHO05D005731 5.0e-11 72.4 133 36.8
RcHm_v2.0_Chr7g0226531 Rosa chinensis HOM05D000860 ORTHO05D005731 5.0e-11 72.4 142 36.6
HanXRQChr13g0403481 Helianthus annuus HOM05D000860 ORTHO05D005731 8.5e-11 71.6 143 34.3
Nitab4.5_0003701g0030 Nicotiana tabacum HOM05D000860 ORTHO05D005731 8.5e-11 71.6 150 36.0
Glyma.03G180300 Glycine max HOM05D000860 ORTHO05D005731 1.1e-10 71.2 130 39.2
Manes.09G068966 Manihot esculenta HOM05D000860 ORTHO05D005731 1.1e-10 71.2 142 35.9
Thecc.05G057900 Theobroma cacao HOM05D000860 ORTHO05D005731 1.1e-10 71.2 148 35.1
QL07p044635 Quercus lobata HOM05D000860 ORTHO05D005731 1.5e-10 70.9 144 36.1
Sopen11g028050 Solanum pennellii HOM05D000860 ORTHO05D005731 1.9e-10 70.5 159 35.8
Duzib093G2042 Durio zibethinus HOM05D000860 ORTHO05D005731 2.5e-10 70.1 146 34.2
PSO339G5579 Papaver somniferum HOM05D000860 ORTHO05D005731 2.5e-10 70.1 146 34.2
CiPaw.09G177100 Carya illinoinensis HOM05D000860 ORTHO05D005731 3.2e-10 69.7 144 34.7
Duzib128G0216 Durio zibethinus HOM05D000860 ORTHO05D005731 3.2e-10 69.7 143 35.0
Solyc11g069330.1 Solanum lycopersicum HOM05D000860 ORTHO05D005731 3.2e-10 69.7 159 35.8
Sc20g0005200 Simmondsia chinensis HOM05D000860 ORTHO05D005731 4.2e-10 69.3 148 36.5
DCAR_018816 Daucus carota HOM05D000860 ORTHO05D005731 5.5e-10 68.9 142 35.9
SGA_v2.0_scaffold97G29220 Striga asiatica HOM05D000860 ORTHO05D005731 5.5e-10 68.9 142 35.9
Peaxi162Scf00270g00092 Petunia axillaris HOM05D000860 ORTHO05D005731 7.2e-10 68.6 147 35.4
Potri.016G088900 Populus trichocarpa HOM05D000860 ORTHO05D005731 7.2e-10 68.6 143 32.9
Haze_20609 Corylus avellana HOM05D000860 ORTHO05D005731 9.4e-10 68.2 142 35.9
Cfa017540 Carpinus fangiana HOM05D000860 ORTHO05D005731 1.2e-09 67.8 142 35.9
ECA248G3821 Erigeron canadensis HOM05D000860 ORTHO05D005731 1.2e-09 67.8 139 36.7
PSO063G2151 Papaver somniferum HOM05D000860 ORTHO05D005731 1.2e-09 67.8 146 34.2
Atru.chr8.1875 Acer truncatum HOM05D000860 ORTHO05D005731 1.6e-09 67.4 143 32.9
PGSC0003DMG400008059 Solanum tuberosum HOM05D000860 ORTHO05D005731 1.6e-09 67.4 159 35.2
VMungo0720G0157 Vigna mungo HOM05D000860 ORTHO05D005731 1.6e-09 67.4 162 33.3
arahy.Tifrunner.gnm1.ann1.7R2GAN Arachis hypogaea HOM05D000860 ORTHO05D005731 2.1e-09 67.0 142 35.2
arahy.Tifrunner.gnm1.ann1.AHVV25 Arachis hypogaea HOM05D000860 ORTHO05D005731 2.1e-09 67.0 142 35.2
Eucgr.A01156 Eucalyptus grandis HOM05D000860 ORTHO05D005731 2.1e-09 67.0 94 43.6
SEGI_31539 Sequoiadendron giganteum HOM05D000860 ORTHO05D003230 2.1e-09 67.0 139 35.3
Aqoxy1G01248 Aquilegia oxysepala HOM05D000860 ORTHO05D005731 3.6e-09 66.2 142 33.1
Lalb_Chr01g0018861 Lupinus albus HOM05D000860 ORTHO05D005731 3.6e-09 66.2 143 31.5
THA.LOC104806503 Tarenaya hassleriana HOM05D000860 ORTHO05D005731 3.6e-09 66.2 142 31.7
Gohir.D01G204000 Gossypium hirsutum HOM05D000860 ORTHO05D005731 6.1e-09 65.5 86 41.9
A04p06160 Brassica napus HOM05D000860 ORTHO05D005731 8.0e-09 65.1 137 33.6
Lsat_1_v5_gn_6_46140 Lactuca sativa HOM05D000860 ORTHO05D005731 8.0e-09 65.1 86 41.9
Ca_08841_v3 Cicer arietinum L. HOM05D000860 ORTHO05D005731 1.0e-08 64.7 86 43.0
Ca_11464_v3 Cicer arietinum L. HOM05D000860 ORTHO05D005731 1.0e-08 64.7 93 37.6
BraA04t16319Z Brassica rapa HOM05D000860 ORTHO05D005731 1.4e-08 64.3 137 33.6
Lj1g0015108 Lotus japonicus HOM05D000860 ORTHO05D005731 1.8e-08 63.9 158 32.3
Glyma.10G051900 Glycine max HOM05D000860 ORTHO05D005731 2.3e-08 63.5 134 35.1
Gorai.002G248500 Gossypium raimondii HOM05D000860 ORTHO05D005731 3.0e-08 63.2 143 32.2
Lalb_Chr06g0171491 Lupinus albus HOM05D000860 ORTHO05D005731 3.0e-08 63.2 140 33.6
Medtr7g101130 Medicago truncatula HOM05D000860 ORTHO05D005731 3.0e-08 63.2 87 44.8
CARHR210160 Cardamine hirsuta HOM05D000860 ORTHO05D005731 4.0e-08 62.8 138 31.2
Gohir.A01G215400 Gossypium hirsutum HOM05D000860 ORTHO05D005731 4.0e-08 62.8 143 32.2
Phvul.007G221200 Phaseolus vulgaris HOM05D000860 ORTHO05D005731 4.0e-08 62.8 132 34.8
Sp6g39530 Schrenkiella parvula HOM05D000860 ORTHO05D005731 4.0e-08 62.8 139 33.1
QL09p001288 Quercus lobata HOM05D000860 ORTHO05D005731 5.2e-08 62.4 85 43.5
SalBow3G3227 Salvia bowleyana HOM05D000860 ORTHO05D005731 5.2e-08 62.4 141 34.0
Psat3g043560 Pisum sativum HOM05D000860 ORTHO05D005731 8.8e-08 61.6 87 41.4
TWI53G0334 Tripterygium wilfordii HOM05D000860 ORTHO05D005731 8.8e-08 61.6 144 33.3
C04p39180 Brassica napus HOM05D000860 ORTHO05D005731 1.1e-07 61.2 166 30.7
BolC4t25490H Brassica oleracea HOM05D000860 ORTHO05D005731 1.1e-07 61.2 166 30.7
Carub.0005s1996 Capsella rubella HOM05D000860 ORTHO05D005731 1.1e-07 61.2 172 29.7
Aa31LG10G8580 Aethionema arabicum HOM05D000860 ORTHO05D005731 1.5e-07 60.8 142 30.3
BcaC02g09168 Brassica carinata HOM05D000860 ORTHO05D005731 1.5e-07 60.8 137 33.6
Lj5g0023643 Lotus japonicus HOM05D000860 ORTHO05D005731 1.5e-07 60.8 147 30.6
AL6G12470 Arabidopsis lyrata HOM05D000860 ORTHO05D005731 2.0e-07 60.5 140 29.3
Lalb_Chr25g0289151 Lupinus albus HOM05D000860 ORTHO05D005731 2.0e-07 60.5 74 45.9
Nn1g03114 Nelumbo nucifera HOM05D000860 ORTHO05D005731 2.6e-07 60.1 67 50.7
Thhalv10011158m.g Eutrema salsugineum HOM05D000860 ORTHO05D005731 3.3e-07 59.7 172 29.7
THA.LOC104816335 Tarenaya hassleriana HOM05D000860 ORTHO05D005731 3.3e-07 59.7 173 27.7
CARHR163310 Cardamine hirsuta HOM05D000860 ORTHO05D005731 4.4e-07 59.3 143 31.5
Glyma.13G139300 Glycine max HOM05D000860 ORTHO05D005731 4.4e-07 59.3 139 35.3
SEGI_30032 Sequoiadendron giganteum HOM05D000860 ORTHO05D003230 4.4e-07 59.3 135 32.6
Aa31LG1G21890 Aethionema arabicum HOM05D000860 ORTHO05D005731 5.7e-07 58.9 145 26.2
EL10Ac7g16545 Beta vulgaris HOM05D000860 ORTHO05D005731 5.7e-07 58.9 143 31.5
BcaB02g08527 Brassica carinata HOM05D000860 ORTHO05D005731 5.7e-07 58.9 141 34.0
AUR62040362 Chenopodium quinoa HOM05D000860 ORTHO05D005731 5.7e-07 58.9 143 30.1
Dinv32756 Davidia involucrata HOM05D000860 ORTHO05D005731 5.7e-07 58.9 72 48.6
Medtr1g064690 Medicago truncatula HOM05D000860 ORTHO05D005731 5.7e-07 58.9 141 30.5
Psat6g067960 Pisum sativum HOM05D000860 ORTHO05D005731 7.5e-07 58.5 91 34.1
TPR.G18266 Trifolium pratense HOM05D000860 ORTHO05D005731 9.7e-07 58.2 142 32.4
TPR.G21206 Trifolium pratense HOM05D000860 ORTHO05D005731 9.7e-07 58.2 143 30.1
AT3G53400 Arabidopsis thaliana HOM05D000860 ORTHO05D005731 1.7e-06 57.4 143 30.1
TWI74G0048 Tripterygium wilfordii HOM05D000860 ORTHO05D005731 1.7e-06 57.4 149 32.9
Psat6g084760 Pisum sativum HOM05D000860 ORTHO05D005731 2.2e-06 57.0 87 40.2
Migut.D02216 Erythranthe guttata HOM05D000860 ORTHO05D005731 2.8e-06 56.6 143 32.2
AL5G34320 Arabidopsis lyrata HOM05D000860 ORTHO05D005731 3.7e-06 56.2 143 28.7
Cpa.g.c33722 Carica papaya HOM05D000860 ORTHO05D005731 3.7e-06 56.2 74 40.5
Sp5g08940 Schrenkiella parvula HOM05D000860 ORTHO05D005731 3.7e-06 56.2 145 30.3
TPR.G21211 Trifolium pratense HOM05D000860 ORTHO05D005731 6.3e-06 55.5 145 30.3
AUR62042284 Chenopodium quinoa HOM05D000860 ORTHO05D005731 8.2e-06 55.1 143 29.4
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 8.2e-06 55.1 87 37.9


User provided reference genes

Program Settings