Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000900 Vanilla planifolia HOM05D003637 ORTHO05D004175 2.6e-215 751.9 406 100.0
MBI03_g13500_MAGBIO Magnolia biondii HOM05D003637 ORTHO05D004175 1.2e-76 291.2 401 45.9
MBI06_g32172_MAGBIO Magnolia biondii HOM05D003637 ORTHO05D004175 1.2e-76 291.2 404 45.5
Nn3g21609 Nelumbo nucifera HOM05D003637 ORTHO05D004175 5.0e-62 242.7 399 42.1
CDE10G0800 Ceratophyllum demersum HOM05D003637 ORTHO05D004175 4.7e-60 236.1 404 41.3
TAR628G0957 Trochodendron aralioides HOM05D003637 ORTHO05D004175 9.2e-56 221.9 376 40.4
PSO063G3025 Papaver somniferum HOM05D003637 ORTHO05D004175 2.3e-54 217.2 398 39.4
PSO782G5164 Papaver somniferum HOM05D003637 ORTHO05D004175 5.0e-54 216.1 398 39.4
Zm00001eb267790 Zea mays HOM05D003637 ORTHO05D004175 5.6e-53 212.6 401 37.7
Os05g0150900 Oryza sativa ssp. japonica HOM05D003637 ORTHO05D004175 7.0e-48 195.7 345 39.1
Sc25g0003100 Simmondsia chinensis HOM05D003637 ORTHO05D004175 3.5e-47 193.4 400 36.0
Zm00001eb354240 Zea mays HOM05D003637 ORTHO05D004175 5.1e-46 189.5 411 34.8
Aqoxy1G03903 Aquilegia oxysepala HOM05D003637 ORTHO05D004175 8.6e-46 188.7 403 35.7
Ciclev10018820m.g Citrus clementina HOM05D003637 ORTHO05D004175 2.8e-44 183.7 402 37.3
CiPaw.03G014200 Carya illinoinensis HOM05D003637 ORTHO05D004175 1.4e-43 181.4 398 37.7
MELO3C008093.2 Cucumis melo HOM05D003637 ORTHO05D004175 1.4e-43 181.4 397 35.8
arahy.Tifrunner.gnm1.ann1.JT5ZHZ Arachis hypogaea HOM05D003637 ORTHO05D004175 1.8e-43 181.0 398 36.2
Sed0019638 Sechium edule HOM05D003637 ORTHO05D004175 4.0e-43 179.9 405 34.8
CsaV3_2G033230 Cucumis sativus L. HOM05D003637 ORTHO05D004175 6.8e-43 179.1 397 35.3
BcaB04g19390 Brassica carinata HOM05D003637 ORTHO05D004175 1.2e-42 178.3 366 37.7
PGR042G1411 Punica granatum HOM05D003637 ORTHO05D004175 2.0e-42 177.6 401 35.4
Ah.05g170380 Amaranthus hybridus HOM05D003637 ORTHO05D004175 2.6e-42 177.2 397 37.0
ATR1136G178 Amborella trichopoda HOM05D003637 ORTHO05D004175 2.6e-42 177.2 377 34.0
BcaB04g21398 Brassica carinata HOM05D003637 ORTHO05D004175 4.4e-42 176.4 379 38.0
arahy.Tifrunner.gnm1.ann1.ICJU69 Arachis hypogaea HOM05D003637 ORTHO05D004175 5.8e-42 176.0 399 35.3
BraA03t12479Z Brassica rapa HOM05D003637 ORTHO05D004175 9.9e-42 175.3 374 36.1
arahy.Tifrunner.gnm1.ann1.TE3K01 Arachis hypogaea HOM05D003637 ORTHO05D004175 1.3e-41 174.9 397 34.3
C03p40270 Brassica napus HOM05D003637 ORTHO05D004175 1.7e-41 174.5 363 36.1
BolC3t16292H Brassica oleracea HOM05D003637 ORTHO05D004175 1.7e-41 174.5 363 36.1
A03p33090 Brassica napus HOM05D003637 ORTHO05D004175 2.9e-41 173.7 376 35.6
ClCG11G008420 Citrullus lanatus HOM05D003637 ORTHO05D004175 2.9e-41 173.7 398 34.9
BolC1t05898H Brassica oleracea HOM05D003637 ORTHO05D004175 1.9e-40 171.0 376 36.4
arahy.Tifrunner.gnm1.ann1.5D638A Arachis hypogaea HOM05D003637 ORTHO05D004175 2.4e-40 170.6 398 33.7
BcaNung05408 Brassica carinata HOM05D003637 ORTHO05D004175 4.1e-40 169.9 376 36.2
BNapus_Darmor_BZH_scaffold_122p00030 Brassica napus HOM05D003637 ORTHO05D004175 5.4e-40 169.5 396 35.6
vmacro18730 Vaccinium macrocarpon HOM05D003637 ORTHO05D004175 7.1e-40 169.1 420 34.5
GSVIVG01036288001 Vitis vinifera HOM05D003637 ORTHO05D004175 9.2e-40 168.7 396 34.8
THA.LOC104820917 Tarenaya hassleriana HOM05D003637 ORTHO05D004175 1.2e-39 168.3 403 33.5
CANSAT64G0718 Cannabis sativa HOM05D003637 ORTHO05D004175 2.1e-39 167.5 405 34.8
Aa31LG5G13230 Aethionema arabicum HOM05D003637 ORTHO05D004175 3.5e-39 166.8 372 34.1
CANSAT35G0345 Cannabis sativa HOM05D003637 ORTHO05D004175 1.3e-38 164.9 418 34.0
Ca_14602_v3 Cicer arietinum L. HOM05D003637 ORTHO05D004175 6.6e-38 162.5 397 34.5
AL3G12170 Arabidopsis lyrata HOM05D003637 ORTHO05D004175 1.9e-37 161.0 372 34.7
AUR62038534 Chenopodium quinoa HOM05D003637 ORTHO05D004175 1.9e-37 161.0 401 31.7
Hund26943 Selenicereus undatus HOM05D003637 ORTHO05D004175 2.5e-37 160.6 398 33.4
Atru.chr13.2508 Acer truncatum HOM05D003637 ORTHO05D004175 3.3e-37 160.2 408 34.6
Thhalv10020033m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 3.3e-37 160.2 403 33.0
Cfa008076 Carpinus fangiana HOM05D003637 ORTHO05D004175 5.6e-37 159.5 408 33.6
Manes.02G201900 Manihot esculenta HOM05D003637 ORTHO05D004175 5.6e-37 159.5 405 34.1
MSTRG.13350 Avicennia marina HOM05D003637 ORTHO05D004175 9.5e-37 158.7 364 35.2
Sp3g01790 Schrenkiella parvula HOM05D003637 ORTHO05D004175 9.5e-37 158.7 374 34.8
Cfa004677 Carpinus fangiana HOM05D003637 ORTHO05D004175 2.1e-36 157.5 400 34.2
AT3G02760 Arabidopsis thaliana HOM05D003637 ORTHO05D004175 2.8e-36 157.1 374 35.0
Haze_13959 Corylus avellana HOM05D003637 ORTHO05D004175 1.1e-35 155.2 408 33.6
PSO513G0157 Papaver somniferum HOM05D003637 ORTHO05D004175 1.1e-35 155.2 379 35.1
Glyma.05G234900 Glycine max HOM05D003637 ORTHO05D004175 3.1e-35 153.7 388 33.8
AUR62013381 Chenopodium quinoa HOM05D003637 ORTHO05D004175 5.2e-35 152.9 402 30.8
FAN20G2805 Fragaria x ananassa HOM05D003637 ORTHO05D004175 6.8e-35 152.5 393 33.8
Glyma.08G042400 Glycine max HOM05D003637 ORTHO05D004175 6.8e-35 152.5 400 32.2
FvH4_2g00780 Fragaria vesca HOM05D003637 ORTHO05D004175 8.9e-35 152.1 393 34.1
FAN27G1433 Fragaria x ananassa HOM05D003637 ORTHO05D004175 8.9e-35 152.1 396 34.6
Eucgr.F02946 Eucalyptus grandis HOM05D003637 ORTHO05D004175 1.2e-34 151.8 397 34.5
Lalb_Chr16g0387641 Lupinus albus HOM05D003637 ORTHO05D004175 1.2e-34 151.8 392 33.4
Prupe.8G006900 Prunus persica HOM05D003637 ORTHO05D004175 1.2e-34 151.8 401 34.7
Peaxi162Scf00194g01048 Petunia axillaris HOM05D003637 ORTHO05D004175 2.0e-34 151.0 376 34.3
VMungo0251G0405 Vigna mungo HOM05D003637 ORTHO05D004175 2.0e-34 151.0 404 33.4
FAN24G0737 Fragaria x ananassa HOM05D003637 ORTHO05D004175 2.6e-34 150.6 393 33.8
Cpa.g.sc1431.2 Carica papaya HOM05D003637 ORTHO05D004175 3.4e-34 150.2 402 32.3
Rhsim08G0251700 Rhododendron simsii HOM05D003637 ORTHO05D004175 4.4e-34 149.8 419 32.2
QL09p050166 Quercus lobata HOM05D003637 ORTHO05D004175 5.8e-34 149.4 398 33.2
Oeu019452.1 Olea europaea HOM05D003637 ORTHO05D004175 7.6e-34 149.1 399 31.8
RcHm_v2.0_Chr6g0251201 Rosa chinensis HOM05D003637 ORTHO05D004175 1.3e-33 148.3 403 32.0
Carub.0003s0186 Capsella rubella HOM05D003637 ORTHO05D004175 1.7e-33 147.9 345 35.1
Solyc01g102800.3 Solanum lycopersicum HOM05D003637 ORTHO05D004175 1.7e-33 147.9 404 33.7
Haze_10275 Corylus avellana HOM05D003637 ORTHO05D004175 2.2e-33 147.5 387 34.1
Phvul.002G320100 Phaseolus vulgaris HOM05D003637 ORTHO05D004175 2.9e-33 147.1 404 33.4
EL10Ac1g01273 Beta vulgaris HOM05D003637 ORTHO05D004175 6.4e-33 146.0 397 32.2
CARHR076770 Cardamine hirsuta HOM05D003637 ORTHO05D004175 6.4e-33 146.0 402 32.3
SEGI_15544 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 8.4e-33 145.6 418 30.9
Oeu017573.1 Olea europaea HOM05D003637 ORTHO05D004175 1.4e-32 144.8 398 30.9
Sopen01g045200 Solanum pennellii HOM05D003637 ORTHO05D004175 1.9e-32 144.4 405 33.3
CSS0048399 Camellia sinensis var. sinensis HOM05D003637 ORTHO05D004175 2.4e-32 144.1 329 36.2
Eucgr.E00010 Eucalyptus grandis HOM05D003637 ORTHO05D004175 2.4e-32 144.1 394 32.2
QL09p001806 Quercus lobata HOM05D003637 ORTHO05D004175 5.4e-32 142.9 413 33.9
QL11p001805 Quercus lobata HOM05D003637 ORTHO05D004175 5.4e-32 142.9 413 33.9
PGR083G1739 Punica granatum HOM05D003637 ORTHO05D004175 1.2e-31 141.7 327 35.2
BNapus_Darmor_BZH_scaffold_99p00040 Brassica napus HOM05D003637 ORTHO05D004175 1.6e-31 141.4 247 40.5
PGSC0003DMG400018260 Solanum tuberosum HOM05D003637 ORTHO05D004175 1.6e-31 141.4 404 32.9
Atru.chr13.2499 Acer truncatum HOM05D003637 ORTHO05D004175 3.5e-31 140.2 280 37.5
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 5.1e-30 136.3 402 29.6
Psat6g083160 Pisum sativum HOM05D003637 ORTHO05D004175 6.6e-30 136.0 402 31.6
CAN.G1379.10 Capsicum annuum HOM05D003637 ORTHO05D004175 1.9e-29 134.4 429 31.5
Lj4g0018134 Lotus japonicus HOM05D003637 ORTHO05D004175 3.3e-29 133.7 402 32.8
Lj8A738T8 Lonicera japonica HOM05D003637 ORTHO05D004175 9.6e-29 132.1 405 33.3
Thhalv10001912m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 1.3e-28 131.7 400 30.2
MD05G1003500 Malus domestica HOM05D003637 ORTHO05D004175 3.6e-28 130.2 403 31.8
Nitab4.5_0003246g0090 Nicotiana tabacum HOM05D003637 ORTHO05D004175 4.8e-28 129.8 399 31.8
MD10G1004600 Malus domestica HOM05D003637 ORTHO05D004175 1.8e-27 127.9 404 31.4
FAN14G4419 Fragaria x ananassa HOM05D003637 ORTHO05D004175 3.1e-27 127.1 315 36.2
SalBow8G3371 Salvia bowleyana HOM05D003637 ORTHO05D004175 5.3e-27 126.3 402 30.6
TPR.G8734 Trifolium pratense HOM05D003637 ORTHO05D004175 5.3e-27 126.3 399 31.6
SHI17420 Sapria himalayana HOM05D003637 ORTHO05D004175 6.9e-27 125.9 402 31.1
Potri.019G071400 Populus trichocarpa HOM05D003637 ORTHO05D004175 9.0e-27 125.6 401 32.9
Nitab4.5_0001497g0160 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.2e-26 125.2 403 30.8
PSO210G5637 Papaver somniferum HOM05D003637 ORTHO05D004175 5.8e-26 122.9 384 31.0
Nitab4.5_0000110g0370 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.7e-25 121.3 403 30.8
Medtr1g057860 Medicago truncatula HOM05D003637 ORTHO05D004175 2.9e-25 120.6 399 30.1
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 3.8e-25 120.2 379 32.7
Migut.E00203 Erythranthe guttata HOM05D003637 ORTHO05D004175 4.9e-25 119.8 395 30.4
Aa31LG11G13210 Aethionema arabicum HOM05D003637 ORTHO05D004175 1.9e-24 117.9 362 30.1
Lj9C543T19 Lonicera japonica HOM05D003637 ORTHO05D004175 5.4e-24 116.3 426 31.5
Lsat_1_v5_gn_2_108061 Lactuca sativa HOM05D003637 ORTHO05D004175 7.1e-24 115.9 413 32.4
HanXRQChr07g0194841 Helianthus annuus HOM05D003637 ORTHO05D004175 2.1e-23 114.4 412 31.1
Lsat_1_v5_gn_8_62500 Lactuca sativa HOM05D003637 ORTHO05D004175 4.6e-23 113.2 408 31.4
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 1.0e-22 112.1 399 28.1
Cc04_g00120 Coffea canephora HOM05D003637 ORTHO05D004175 6.9e-19 99.4 264 33.0
ECA238G2554 Erigeron canadensis HOM05D003637 ORTHO05D004175 1.5e-18 98.2 402 28.6
DCAR_014239 Daucus carota HOM05D003637 ORTHO05D004175 9.9e-18 95.5 421 29.5
Thecc.05G195900 Theobroma cacao HOM05D003637 ORTHO05D004175 1.3e-17 95.1 263 33.1
Duzib177G0609 Durio zibethinus HOM05D003637 ORTHO05D004175 2.2e-17 94.4 257 33.5
TWI39G1182 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 2.2e-17 94.4 248 33.9
Duzib106G1310 Durio zibethinus HOM05D003637 ORTHO05D004175 6.4e-17 92.8 263 32.3
HanXRQChr01g0009581 Helianthus annuus HOM05D003637 ORTHO05D004175 6.4e-17 92.8 305 31.5
Gohir.D08G246100 Gossypium hirsutum HOM05D003637 ORTHO05D004175 1.9e-16 91.3 257 33.5
Lsat_1_v5_gn_1_27560 Lactuca sativa HOM05D003637 ORTHO05D004175 1.9e-16 91.3 218 33.5
Gohir.A08G225700 Gossypium hirsutum HOM05D003637 ORTHO05D004175 2.4e-16 90.9 257 33.5
Gorai.004G262600 Gossypium raimondii HOM05D003637 ORTHO05D004175 2.4e-16 90.9 257 33.1
SEGI_40078 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 4.2e-16 90.1 239 30.5
TWI38G2004 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 2.1e-15 87.8 227 33.9
COL.COLO4_20337 Corchorus olitorius HOM05D003637 ORTHO05D004175 4.6e-15 86.7 231 34.2
Lsat_1_v5_gn_3_107861 Lactuca sativa HOM05D003637 ORTHO05D004175 1.3e-14 85.1 383 27.7
TAR374G0972 Trochodendron aralioides HOM05D003637 ORTHO05D004175 3.9e-14 83.6 169 36.1
Mapoly0125s0016 Marchantia polymorpha HOM05D003637 ORTHO05D004175 1.9e-13 81.3 464 23.3
TAR374G0451 Trochodendron aralioides HOM05D003637 ORTHO05D004175 2.5e-13 80.9 88 56.8
Lsat_1_v5_gn_3_57620 Lactuca sativa HOM05D003637 ORTHO05D004175 8.1e-12 75.9 196 33.2
BraSC328t45965Z Brassica rapa HOM05D003637 ORTHO05D004175 6.9e-11 72.8 80 46.2
AagrBONN_evm.TU.Sc2ySwM_344.5308 Anthoceros agrestis HOM05D003637 ORTHO05D004175 1.4e-08 65.1 193 31.1
BcaC06g34238 Brassica carinata HOM05D001392 ORTHO05D032327 4.6e-07 60.1 84 40.5
CBR_g19630 Chara braunii HOM05D003637 ORTHO05D004175 1.0e-06 58.9 299 26.1


User provided reference genes

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