Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 8.9e-306 1052.7 515 100.0
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 8.5e-107 391.7 532 40.8
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 2.5e-106 390.2 534 42.5
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.0e-100 370.5 524 40.6
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 1.0e-99 368.2 527 41.4
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 6.1e-97 359.0 528 40.5
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.0e-96 358.2 529 40.6
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.0e-96 358.2 545 39.4
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.4e-96 357.8 533 37.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 4.4e-95 352.8 527 39.5
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 2.4e-93 347.1 527 38.5
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 2.0e-92 344.0 527 40.6
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 4.5e-92 342.8 525 39.8
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 1.0e-91 341.7 532 38.5
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.7e-91 340.9 528 39.4
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 6.5e-91 339.0 531 36.9
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 4.2e-90 336.3 534 37.8
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.4e-88 331.3 489 40.7
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.2e-87 328.2 531 39.4
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.4e-87 326.2 515 38.4
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.3e-86 324.7 525 38.3
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.2e-86 323.9 528 37.5
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.1e-85 321.6 527 38.3
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.4e-85 321.2 481 40.5
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 9.1e-85 318.5 529 38.4
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 4.5e-84 316.2 521 37.0
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 5.9e-84 315.8 529 38.2
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 7.7e-84 315.5 474 38.6
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.3e-83 314.7 525 36.4
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 1.7e-83 314.3 536 38.4
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 1.7e-83 314.3 531 37.3
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 2.3e-83 313.9 526 37.3
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 8.6e-83 312.0 526 37.3
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.9e-82 310.8 520 37.5
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 3.3e-82 310.1 531 35.4
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 7.2e-82 308.9 529 37.6
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.8e-81 307.0 466 39.7
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 4.7e-81 306.2 523 38.0
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.0e-80 305.1 532 34.0
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 1.4e-80 304.7 536 35.8
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 1.8e-80 304.3 536 36.0
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 2.3e-80 303.9 527 36.8
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 2.0e-79 300.8 657 32.4
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 2.6e-79 300.4 530 36.6
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 9.8e-79 298.5 541 36.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 9.8e-79 298.5 506 35.8
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 9.8e-79 298.5 537 35.0
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 9.8e-79 298.5 522 37.2
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 4.9e-78 296.2 530 35.7
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.1e-77 295.0 529 36.3
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 3.2e-77 293.5 530 36.4
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 5.4e-77 292.7 523 36.5
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 5.4e-77 292.7 468 37.8
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 2.7e-76 290.4 541 35.7
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.3e-75 288.1 527 34.7
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 1.3e-75 288.1 541 36.0
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 1.3e-75 288.1 520 34.6
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 3.9e-75 286.6 529 35.7
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 5.0e-75 286.2 526 35.4
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 6.6e-75 285.8 535 35.1
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 6.6e-75 285.8 369 45.5
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 8.6e-75 285.4 519 35.3
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.9e-74 284.3 525 35.6
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 2.5e-74 283.9 544 35.5
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 4.3e-74 283.1 535 35.1
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.2e-73 281.6 532 35.7
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 2.1e-73 280.8 543 35.2
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 3.6e-73 280.0 441 36.7
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 5.8e-71 272.7 533 32.3
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 1.3e-70 271.6 547 33.6
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 1.7e-70 271.2 532 35.7
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 3.9e-67 260.0 664 29.1
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 4.3e-66 256.5 508 32.5
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 8.1e-65 252.3 515 34.0
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 7.5e-63 245.7 450 36.0
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 9.8e-63 245.4 469 33.7
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.7e-62 244.6 522 33.0
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 1.6e-60 238.0 378 37.3
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 7.8e-60 235.7 555 31.2
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.0e-59 233.8 388 37.4
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.2e-57 228.4 422 36.5
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 1.8e-56 224.6 460 34.3
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 3.7e-54 216.9 422 36.7
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 1.9e-53 214.5 279 44.1
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 1.2e-52 211.8 410 35.6
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 3.9e-51 206.8 495 31.7
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 5.2e-48 196.4 899 23.4
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.4e-45 188.3 271 41.0
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 9.3e-45 185.7 460 31.3
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.0e-43 182.2 270 38.5
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 3.0e-43 180.6 549 27.1
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 2.2e-38 164.5 326 34.7
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.8e-38 163.7 292 36.6
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 4.9e-38 163.3 320 32.2
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.3e-35 155.2 338 34.9
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 1.9e-34 151.4 290 37.2
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 2.8e-33 147.5 462 27.9
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 2.4e-32 144.4 524 26.0
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 1.9e-29 134.8 566 24.6
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 1.5e-26 125.2 138 47.1
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.5e-26 125.2 146 45.9
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 6.2e-25 119.8 145 43.4
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 8.1e-25 119.4 246 32.5
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 3.4e-23 114.0 134 43.3
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 6.0e-20 103.2 113 45.1
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 7.4e-18 96.3 141 39.0
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 2.1e-17 94.7 131 42.0
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 6.3e-17 93.2 74 52.7
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.2e-15 89.0 211 28.9
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 7.6e-15 86.3 270 30.7
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 2.7e-12 77.8 165 32.7
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 3.9e-11 73.9 185 29.2
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 6.7e-11 73.2 72 47.2
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 3.3e-10 70.9 134 33.6
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 4.8e-09 67.0 115 38.3
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 4.8e-09 67.0 115 38.3
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 4.8e-09 67.0 115 38.3
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 6.3e-09 66.6 125 34.4
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 6.9e-08 63.2 94 39.4
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 4.5e-07 60.5 135 32.6


User provided reference genes

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