Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.4e-228 794.3 398 100.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.3e-203 713.0 373 96.2
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.1e-73 280.4 307 51.5
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.2e-70 270.4 294 52.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 3.2e-69 266.5 285 53.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 3.5e-68 263.1 296 49.0
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.6e-68 262.7 234 58.1
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.1e-66 258.1 279 51.6
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 4.3e-66 256.1 283 51.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.3e-66 256.1 248 52.8
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 4.3e-66 256.1 328 47.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.6e-65 254.2 275 50.9
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 2.1e-65 253.8 226 57.5
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.8e-65 253.4 307 49.2
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.8e-65 253.4 329 47.4
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.1e-65 251.9 272 52.6
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.1e-65 251.9 266 53.8
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.4e-64 250.4 260 52.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 2.4e-64 250.4 233 55.8
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.3e-64 249.2 275 49.8
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 6.9e-64 248.8 284 51.1
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 6.9e-64 248.8 315 45.1
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 6.9e-64 248.8 253 53.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.2e-63 248.1 250 54.4
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.2e-63 248.1 225 56.9
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 2.6e-63 246.9 229 57.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 3.4e-63 246.5 235 57.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 4.5e-63 246.1 226 55.3
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.5e-63 246.1 291 47.4
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 4.5e-63 246.1 275 51.6
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.8e-63 245.7 242 53.3
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 5.8e-63 245.7 235 57.0
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.6e-63 245.4 268 51.9
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 7.6e-63 245.4 226 57.1
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.9e-63 245.0 266 52.6
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.3e-62 244.6 241 54.8
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.7e-62 244.2 314 44.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 2.9e-62 243.4 253 53.0
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.8e-62 243.0 276 50.7
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.9e-62 242.7 222 58.1
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.4e-62 242.3 276 50.4
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.4e-62 242.3 279 51.3
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 6.4e-62 242.3 286 49.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.4e-62 241.9 266 52.3
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.4e-62 241.9 296 46.6
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.9e-61 240.7 233 55.4
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 3.2e-61 240.0 260 51.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 3.2e-61 240.0 292 49.0
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.2e-61 239.6 223 56.5
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.2e-61 239.6 226 53.5
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 7.1e-61 238.8 249 50.6
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.3e-61 238.4 260 52.7
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.6e-60 237.7 250 52.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.1e-60 237.3 290 46.9
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 2.1e-60 237.3 276 49.6
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.1e-60 237.3 276 49.6
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 6.0e-60 235.7 330 45.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.0e-60 235.7 229 56.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 6.0e-60 235.7 293 48.1
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.0e-59 235.0 202 59.4
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.3e-59 233.8 259 50.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.0e-59 233.4 276 50.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 3.9e-59 233.0 225 56.0
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.7e-59 231.9 225 53.3
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 8.7e-59 231.9 225 53.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-58 231.5 255 48.6
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-58 230.7 255 49.0
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.5e-58 230.3 225 52.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.3e-58 229.6 270 49.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.1e-56 224.9 293 47.1
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.4e-56 224.6 213 53.5
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.2e-55 221.5 227 52.0
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.5e-55 221.1 225 53.3
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.6e-55 220.3 167 65.3
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.0e-54 218.4 307 41.7
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-54 218.0 277 46.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.2e-54 217.2 298 45.3
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.1e-53 214.9 172 61.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.1e-53 214.9 223 52.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 4.2e-53 213.0 223 51.1
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 4.2e-53 213.0 271 45.8
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 5.5e-53 212.6 223 51.1
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.0e-51 208.4 272 47.4
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.8e-51 207.6 249 47.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.8e-51 207.6 173 59.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.8e-51 207.6 173 59.0
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.8e-51 207.6 361 40.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 6.7e-51 205.7 173 58.4
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 6.7e-51 205.7 214 53.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 8.7e-51 205.3 210 52.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.3e-50 203.4 187 56.1
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.6e-50 201.8 297 39.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 6.3e-49 199.1 317 40.4
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 5.3e-48 196.1 167 60.5
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 6.9e-48 195.7 328 39.6
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 2.6e-47 193.7 234 47.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.4e-47 193.4 212 54.2
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 5.8e-47 192.6 153 63.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.9e-43 179.9 236 48.7
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.3e-40 169.5 188 49.5
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.5e-37 159.5 164 52.4
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-35 155.2 182 48.9
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.1e-34 151.8 268 39.2
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.7e-33 147.9 153 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 2.2e-33 147.5 213 38.0
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.2e-33 147.5 197 43.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.2e-30 137.5 99 67.7
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.2e-28 131.7 149 53.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.2e-25 120.9 209 41.1
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.8e-25 120.6 87 66.7
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.7e-25 120.2 148 48.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 8.2e-25 119.0 92 62.0
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 6.7e-19 99.4 166 32.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 2.6e-18 97.4 196 29.6
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 5.5e-13 79.7 69 58.0
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.7e-12 76.6 117 39.3
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 3.0e-11 73.9 55 63.6
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 7.5e-10 69.3 166 30.1
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 7.7e-07 59.3 132 38.6
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-06 57.8 74 48.6
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.9e-06 57.4 74 54.1


User provided reference genes

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