Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.1e-54 216.5 119 100.0
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.7e-31 137.5 98 74.5
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 6.5e-18 94.4 92 56.5
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 8.5e-18 94.0 46 91.3
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.5e-17 92.4 91 58.2
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 9.4e-17 90.5 110 49.1
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.2e-16 90.1 111 50.5
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.2e-16 90.1 88 56.8
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.6e-16 89.7 84 58.3
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.6e-16 89.7 84 58.3
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.6e-16 89.7 84 54.8
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.6e-16 89.7 84 54.8
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.6e-16 89.7 46 87.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.7e-16 89.0 86 58.1
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.7e-16 89.0 86 58.1
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 2.7e-16 89.0 84 57.1
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.7e-16 89.0 84 57.1
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 3.6e-16 88.6 46 84.8
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 3.6e-16 88.6 88 54.5
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.6e-16 88.6 84 58.3
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 3.6e-16 88.6 46 87.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 4.6e-16 88.2 84 57.1
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.6e-16 88.2 84 58.3
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 4.6e-16 88.2 84 58.3
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 4.6e-16 88.2 91 57.1
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.1e-16 87.8 84 58.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 6.1e-16 87.8 82 57.3
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.1e-16 87.8 84 57.1
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.1e-16 87.8 84 57.1
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 7.9e-16 87.4 84 58.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.0e-15 87.0 109 47.7
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.0e-15 87.0 109 47.7
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.0e-15 87.0 84 57.1
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.0e-15 87.0 84 56.0
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.4e-15 86.7 45 84.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.4e-15 86.7 84 57.1
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.4e-15 86.7 123 43.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.4e-15 86.7 85 55.3
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.4e-15 86.7 84 54.8
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.4e-15 86.7 89 57.3
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.8e-15 86.3 104 49.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.8e-15 86.3 104 49.0
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.8e-15 86.3 84 57.1
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.8e-15 86.3 46 84.8
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 2.3e-15 85.9 46 84.8
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 2.3e-15 85.9 84 57.1
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 2.3e-15 85.9 85 56.5
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.0e-15 85.5 84 56.0
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.0e-15 85.5 109 47.7
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 3.0e-15 85.5 84 56.0
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 3.9e-15 85.1 84 54.8
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 3.9e-15 85.1 120 42.5
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 3.9e-15 85.1 46 80.4
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 5.1e-15 84.7 83 55.4
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 5.1e-15 84.7 46 84.8
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 5.1e-15 84.7 84 56.0
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.1e-15 84.7 94 52.1
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 6.7e-15 84.3 46 82.6
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 6.7e-15 84.3 46 82.6
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 6.7e-15 84.3 121 43.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 6.7e-15 84.3 83 54.2
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 6.7e-15 84.3 46 82.6
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 8.8e-15 84.0 84 56.0
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 8.8e-15 84.0 45 82.2
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 8.8e-15 84.0 116 44.0
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 8.8e-15 84.0 83 54.2
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 8.8e-15 84.0 46 82.6
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 8.8e-15 84.0 46 80.4
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.1e-14 83.6 83 54.2
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.5e-14 83.2 45 80.0
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.0e-14 82.8 84 53.6
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.0e-14 82.8 86 53.5
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.0e-14 82.8 46 82.6
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 2.0e-14 82.8 84 54.8
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.5e-14 82.4 84 54.8
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 2.5e-14 82.4 84 53.6
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.5e-14 82.4 46 80.4
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.5e-14 82.4 46 80.4
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 3.3e-14 82.0 46 80.4
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 3.3e-14 82.0 46 78.3
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 3.3e-14 82.0 123 41.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.3e-14 82.0 123 41.5
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 4.3e-14 81.6 84 52.4
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 4.3e-14 81.6 46 78.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 5.7e-14 81.3 46 80.4
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.7e-14 81.3 123 41.5
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 5.7e-14 81.3 84 52.4
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 5.7e-14 81.3 46 78.3
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 5.7e-14 81.3 46 78.3
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 5.7e-14 81.3 46 78.3
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 1.3e-13 80.1 84 52.4
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.3e-13 80.1 80 52.5
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.3e-13 80.1 80 52.5
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.7e-13 79.7 89 49.4
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.7e-13 79.7 83 53.0
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.2e-13 79.3 45 75.6
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 2.8e-13 79.0 46 78.3
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.8e-13 79.0 84 51.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.8e-13 79.0 84 53.6
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 8.2e-13 77.4 45 75.6
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.4e-12 76.6 43 79.1
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 1.8e-12 76.3 47 76.6
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.2e-11 73.6 75 54.7
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.2e-08 63.5 72 50.0


User provided reference genes

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