Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000741 Vanilla planifolia HOM05D005320 ORTHO05D007922 7.4e-88 327.0 148 100.0
HPP92_026786 Vanilla planifolia HOM05D005320 ORTHO05D007922 7.9e-74 280.4 130 98.5
PSO339G2759 Papaver somniferum HOM05D005320 ORTHO05D007922 6.7e-65 250.8 130 86.9
Ciclev10012735m.g Citrus clementina HOM05D005320 ORTHO05D007922 1.1e-64 250.0 130 85.4
PSO063G2683 Papaver somniferum HOM05D005320 ORTHO05D007922 1.5e-64 249.6 130 86.9
Dinv35573 Davidia involucrata HOM05D005320 ORTHO05D007922 3.3e-64 248.4 130 85.4
EL10As1g23111 Beta vulgaris HOM05D005320 ORTHO05D007922 5.7e-64 247.7 130 83.8
ClCG04G008030 Citrullus lanatus HOM05D005320 ORTHO05D007922 5.7e-64 247.7 130 84.6
CAN.G324.16 Capsicum annuum HOM05D005320 ORTHO05D007922 7.4e-64 247.3 130 84.6
CsaV3_4G025180 Cucumis sativus L. HOM05D005320 ORTHO05D007922 1.7e-63 246.1 130 83.8
Nn2g11189 Nelumbo nucifera HOM05D005320 ORTHO05D007922 1.7e-63 246.1 130 84.6
TAR623G0888 Trochodendron aralioides HOM05D005320 ORTHO05D007922 1.7e-63 246.1 130 86.2
Manes.09G092200 Manihot esculenta HOM05D005320 ORTHO05D007922 2.2e-63 245.7 130 83.1
PGR031G0341 Punica granatum HOM05D005320 ORTHO05D007922 2.2e-63 245.7 130 83.8
CiPaw.09G195900 Carya illinoinensis HOM05D005320 ORTHO05D007922 2.8e-63 245.4 130 83.8
Glyma.03G068800 Glycine max HOM05D005320 ORTHO05D007922 2.8e-63 245.4 130 82.3
Peaxi162Scf00094g00911 Petunia axillaris HOM05D005320 ORTHO05D007922 3.7e-63 245.0 130 83.8
GSVIVG01034127001 Vitis vinifera HOM05D005320 ORTHO05D007922 3.7e-63 245.0 130 83.1
CANSAT35G1431 Cannabis sativa HOM05D005320 ORTHO05D007922 4.8e-63 244.6 130 83.8
Gohir.A04G083900 Gossypium hirsutum HOM05D005320 ORTHO05D007922 4.8e-63 244.6 130 83.1
Gohir.D04G122700 Gossypium hirsutum HOM05D005320 ORTHO05D007922 4.8e-63 244.6 130 83.1
Gorai.012G105600 Gossypium raimondii HOM05D005320 ORTHO05D007922 4.8e-63 244.6 130 83.1
Ca_20076_v3 Cicer arietinum L. HOM05D005320 ORTHO05D007922 6.3e-63 244.2 130 82.3
Cpa.g.c45575 Carica papaya HOM05D005320 ORTHO05D007922 8.2e-63 243.8 130 82.3
MD04G1133400 Malus domestica HOM05D005320 ORTHO05D007922 1.1e-62 243.4 130 83.1
Nitab4.5_0000770g0150 Nicotiana tabacum HOM05D005320 ORTHO05D007922 1.1e-62 243.4 130 83.1
Actinidia05326 Actinidia chinensis HOM05D005320 ORTHO05D007922 1.4e-62 243.0 130 83.8
Psat7g239840 Pisum sativum HOM05D005320 ORTHO05D007922 1.4e-62 243.0 130 80.8
MD12G1146200 Malus domestica HOM05D005320 ORTHO05D007922 1.8e-62 242.7 130 83.1
Glyma.01G100200 Glycine max HOM05D005320 ORTHO05D007922 2.4e-62 242.3 130 80.8
MBI05_g35634_MAGBIO Magnolia biondii HOM05D005320 ORTHO05D007922 2.4e-62 242.3 129 82.9
arahy.Tifrunner.gnm1.ann1.AE34S8 Arachis hypogaea HOM05D005320 ORTHO05D007922 3.1e-62 241.9 130 82.3
arahy.Tifrunner.gnm1.ann1.SHW8SI Arachis hypogaea HOM05D005320 ORTHO05D007922 3.1e-62 241.9 130 82.3
BcaB06g29019 Brassica carinata HOM05D005320 ORTHO05D007922 3.1e-62 241.9 130 81.5
Sabra16G0101600 Salix brachista HOM05D005320 ORTHO05D007922 3.1e-62 241.9 142 76.1
Sc07g0007050 Simmondsia chinensis HOM05D005320 ORTHO05D007922 3.1e-62 241.9 128 83.6
BraA04t18363Z Brassica rapa HOM05D005320 ORTHO05D007922 4.1e-62 241.5 130 81.5
Lalb_Chr01g0013501 Lupinus albus HOM05D005320 ORTHO05D007922 4.1e-62 241.5 130 81.5
TWI74G0393 Tripterygium wilfordii HOM05D005320 ORTHO05D007922 4.1e-62 241.5 130 82.3
SGA_v2.0_scaffold126G33759 Striga asiatica HOM05D005320 ORTHO05D007922 5.3e-62 241.1 130 81.5
Lj3g0008944 Lotus japonicus HOM05D005320 ORTHO05D007922 7.0e-62 240.7 130 80.8
Sp4g20060 Schrenkiella parvula HOM05D005320 ORTHO05D007922 7.0e-62 240.7 130 80.8
Thecc.05G035400 Theobroma cacao HOM05D005320 ORTHO05D007922 9.1e-62 240.4 130 82.3
Prupe.6G259400 Prunus persica HOM05D005320 ORTHO05D007922 1.2e-61 240.0 130 82.3
THA.LOC104823414 Tarenaya hassleriana HOM05D005320 ORTHO05D007922 1.2e-61 240.0 130 80.8
AL4G34610 Arabidopsis lyrata HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 80.0
AT2G37680 Arabidopsis thaliana HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 80.0
CARHR131860 Cardamine hirsuta HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 80.0
Thhalv10017226m.g Eutrema salsugineum HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 80.0
Potri.016G100600 Populus trichocarpa HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 80.8
Solyc10g084850.2 Solanum lycopersicum HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 81.5
PGSC0003DMG400011070 Solanum tuberosum HOM05D005320 ORTHO05D007922 1.6e-61 239.6 130 81.5
BcaC02g07499 Brassica carinata HOM05D005320 ORTHO05D007922 2.6e-61 238.8 130 80.8
Zm00001eb335820 Zea mays HOM05D005320 ORTHO05D007922 2.6e-61 238.8 130 80.8
AUR62042382 Chenopodium quinoa HOM05D005320 ORTHO05D007922 3.5e-61 238.4 126 83.3
AUR62043523 Chenopodium quinoa HOM05D005320 ORTHO05D007922 3.5e-61 238.4 125 84.0
Cc06_g02320 Coffea canephora HOM05D005320 ORTHO05D007922 3.5e-61 238.4 130 81.5
COL.COLO4_14757 Corchorus olitorius HOM05D005320 ORTHO05D007922 3.5e-61 238.4 130 82.3
Medtr4g020460 Medicago truncatula HOM05D005320 ORTHO05D007922 3.5e-61 238.4 130 80.0
RcHm_v2.0_Chr3g0466041 Rosa chinensis HOM05D005320 ORTHO05D007922 3.5e-61 238.4 130 82.3
CSS0049441 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 4.5e-61 238.0 130 81.5
CDE06G1896 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 5.9e-61 237.7 130 80.8
Aqoxy1G00876 Aquilegia oxysepala HOM05D005320 ORTHO05D007922 7.7e-61 237.3 130 80.8
Lj3A964T54 Lonicera japonica HOM05D005320 ORTHO05D007922 7.7e-61 237.3 130 80.8
MSTRG.19072 Avicennia marina HOM05D005320 ORTHO05D007922 1.0e-60 236.9 130 80.8
FvH4_6g13220 Fragaria vesca HOM05D005320 ORTHO05D007922 1.0e-60 236.9 130 82.3
FAN02G2927 Fragaria x ananassa HOM05D005320 ORTHO05D007922 1.0e-60 236.9 130 82.3
Os03g0679000 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 1.3e-60 236.5 130 80.0
Sopen10g034290 Solanum pennellii HOM05D005320 ORTHO05D007922 1.7e-60 236.1 130 80.0
Rhsim05G0195000 Rhododendron simsii HOM05D005320 ORTHO05D007922 2.2e-60 235.7 130 80.8
TPR.G17890 Trifolium pratense HOM05D005320 ORTHO05D007922 2.2e-60 235.7 130 79.2
FAN14G1919 Fragaria x ananassa HOM05D005320 ORTHO05D007922 2.9e-60 235.3 130 81.5
Oeu007799.1 Olea europaea HOM05D005320 ORTHO05D007922 2.9e-60 235.3 130 79.2
Carub.0004s1963 Capsella rubella HOM05D005320 ORTHO05D007922 3.8e-60 235.0 130 79.2
Os01g0144200 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 3.8e-60 235.0 130 79.2
Hma1.2p1_1082F.1_g255150 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 5.0e-60 234.6 131 81.7
QL07p030104 Quercus lobata HOM05D005320 ORTHO05D007922 8.5e-60 233.8 129 79.1
QL07p030908 Quercus lobata HOM05D005320 ORTHO05D007922 8.5e-60 233.8 129 79.1
CDE07G0950 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 2.5e-59 232.3 130 79.2
Migut.J00304 Erythranthe guttata HOM05D005320 ORTHO05D007922 2.5e-59 232.3 130 79.2
Sed0022090 Sechium edule HOM05D005320 ORTHO05D007922 4.2e-59 231.5 130 80.0
unitig_21.g21010 Utricularia gibba HOM05D005320 ORTHO05D007922 7.2e-59 230.7 130 77.7
Atru.chr8.2015 Acer truncatum HOM05D005320 ORTHO05D007922 1.2e-58 229.9 130 79.2
HanXRQChr13g0406901 Helianthus annuus HOM05D005320 ORTHO05D007922 1.2e-58 229.9 130 78.5
Lsat_1_v5_gn_5_153940 Lactuca sativa HOM05D005320 ORTHO05D007922 1.6e-58 229.6 130 78.5
Eucgr.K01475 Eucalyptus grandis HOM05D005320 ORTHO05D007922 2.7e-58 228.8 130 76.9
vmacro20179 Vaccinium macrocarpon HOM05D005320 ORTHO05D007922 3.6e-58 228.4 146 72.6
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 3.6e-58 228.4 117 83.8
ECA248G2752 Erigeron canadensis HOM05D005320 ORTHO05D007922 4.7e-58 228.0 130 78.5
Aa31sc70G70 Aethionema arabicum HOM05D005320 ORTHO05D007922 8.0e-58 227.3 131 78.6
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 1.8e-57 226.1 128 77.3
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 1.8e-57 226.1 125 79.2
Dinv37147 Davidia involucrata HOM05D005320 ORTHO05D007922 3.0e-57 225.3 152 69.1
FAN05G0090 Fragaria x ananassa HOM05D005320 ORTHO05D007922 3.0e-57 225.3 120 84.2
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 2.0e-56 222.6 119 81.5
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 3.7e-55 218.4 117 82.9
DCAR_012114 Daucus carota HOM05D005320 ORTHO05D007922 1.1e-54 216.9 131 74.0
RcHm_v2.0_Chr3g0465971 Rosa chinensis HOM05D005320 ORTHO05D007922 1.6e-53 213.0 117 81.2
Mapoly0038s0068 Marchantia polymorpha HOM05D005320 ORTHO05D007922 1.0e-52 210.3 130 69.2
RcHm_v2.0_Chr3g0466001 Rosa chinensis HOM05D005320 ORTHO05D007922 1.3e-52 209.9 112 83.0
SMO356G0269 Selaginella moellendorffii HOM05D005320 ORTHO05D007922 6.5e-52 207.6 130 67.7
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 2.7e-50 202.2 104 84.6
Duzib128G0467 Durio zibethinus HOM05D005320 ORTHO05D007922 6.1e-50 201.1 103 84.5
Phvul.010G015600 Phaseolus vulgaris HOM05D005320 ORTHO05D007922 6.1e-50 201.1 103 82.5
Nitab4.5_0005100g0070 Nicotiana tabacum HOM05D005320 ORTHO05D007922 1.8e-49 199.5 104 82.7
Zm00001eb124510 Zea mays HOM05D005320 ORTHO05D007922 4.0e-49 198.4 103 81.6
CSS0000536 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 6.8e-49 197.6 111 78.4
Pp3c6_13830 Physcomitrium patens HOM05D005320 ORTHO05D007922 1.2e-48 196.8 149 59.1
ATR0559G120 Amborella trichopoda HOM05D005320 ORTHO05D007922 1.5e-48 196.4 117 73.5
Duzib093G0721 Durio zibethinus HOM05D005320 ORTHO05D007922 4.4e-48 194.9 103 81.6
AagrBONN_evm.TU.Sc2ySwM_117.2668 Anthoceros agrestis HOM05D005320 ORTHO05D007922 2.2e-47 192.6 130 62.3
CBR_g30417 Chara braunii HOM05D005320 ORTHO05D007922 2.2e-47 192.6 137 62.8
HPP92_000739 Vanilla planifolia HOM05D005320 ORTHO05D007922 4.8e-47 191.4 93 97.8
Hma1.2p1_0936F.1_g239015 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 1.0e-44 183.7 131 68.7
Hma1.2p1_1082F.1_g255160 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 1.0e-44 183.7 131 68.7
RcHm_v2.0_Chr3g0465901 Rosa chinensis HOM05D005320 ORTHO05D007922 2.0e-29 132.9 103 63.1
RcHm_v2.0_Chr3g0465921 Rosa chinensis HOM05D005320 ORTHO05D007922 1.6e-26 123.2 70 77.1
Cre17.g744497 Chlamydomonas reinhardtii HOM05D005320 ORTHO05D007922 4.3e-19 98.6 118 44.1
Mapoly0050s0129 Marchantia polymorpha HOM05D005320 ORTHO05D007922 4.6e-13 78.6 128 34.4
MELO3C003145.2 Cucumis melo HOM05D000231 ORTHO05D000132 1.7e-12 76.6 40 82.5
Hma1.2p1_1082F.1_g255140 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 2.1e-10 69.7 40 72.5
RcHm_v2.0_Chr4g0436891 Rosa chinensis HOM05D005320 ORTHO05D007922 6.4e-07 58.2 61 47.5


User provided reference genes

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