Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 1.1e-170 603.2 299 100.0
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 9.4e-82 307.8 295 55.9
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 2.7e-81 306.2 306 53.3
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 2.7e-81 306.2 298 54.4
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 8.8e-80 301.2 299 54.2
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.1e-79 300.8 282 56.0
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 1.1e-79 300.8 292 55.1
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 1.5e-79 300.4 292 55.8
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 5.7e-79 298.5 298 55.7
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 7.4e-79 298.1 294 54.4
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 9.7e-79 297.7 293 53.6
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 1.3e-78 297.4 275 56.7
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 1.7e-78 297.0 299 53.8
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.1e-77 294.3 292 53.4
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 1.1e-77 294.3 290 54.1
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 1.1e-77 294.3 276 56.9
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 1.4e-77 293.9 286 54.9
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 1.8e-77 293.5 294 54.4
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 2.4e-77 293.1 299 52.5
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 3.1e-77 292.7 289 54.0
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 4.1e-77 292.4 293 52.6
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 9.1e-77 291.2 292 53.1
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 4.5e-76 288.9 292 53.4
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 4.5e-76 288.9 298 51.7
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 5.9e-76 288.5 279 55.6
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 5.9e-76 288.5 291 53.3
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 5.9e-76 288.5 292 51.7
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 2.2e-75 286.6 307 53.1
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 8.5e-75 284.6 289 52.2
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 8.5e-75 284.6 301 51.5
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 1.4e-74 283.9 270 55.6
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 1.4e-74 283.9 279 55.2
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 2.5e-74 283.1 289 52.6
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 2.5e-74 283.1 288 52.1
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 3.2e-74 282.7 305 51.8
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 4.2e-74 282.3 293 49.5
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 5.5e-74 282.0 302 49.7
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 9.4e-74 281.2 289 51.6
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 9.4e-74 281.2 314 49.0
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 1.2e-73 280.8 289 51.6
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 1.6e-73 280.4 290 50.0
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 2.7e-73 279.6 297 50.5
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 4.7e-73 278.9 289 51.6
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 4.7e-73 278.9 291 52.6
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 8.0e-73 278.1 273 51.6
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 8.0e-73 278.1 295 50.2
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 8.0e-73 278.1 290 51.7
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 2.3e-72 276.6 298 51.3
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 2.3e-72 276.6 282 51.4
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 8.8e-72 274.6 295 49.8
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 8.8e-72 274.6 289 50.9
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 1.1e-71 274.2 306 50.0
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.1e-71 274.2 296 51.7
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.5e-71 273.9 277 50.9
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 2.0e-71 273.5 268 54.5
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 7.4e-71 271.6 289 51.6
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 2.8e-70 269.6 292 51.0
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 3.7e-70 269.2 294 49.7
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 3.7e-70 269.2 297 49.5
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 4.8e-70 268.9 292 51.4
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 4.8e-70 268.9 277 52.7
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 6.3e-70 268.5 283 51.9
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 1.1e-69 267.7 294 49.7
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 4.1e-69 265.8 291 51.9
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 1.6e-68 263.8 290 50.0
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 2.0e-68 263.5 292 50.3
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 2.6e-68 263.1 279 49.5
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 2.6e-68 263.1 298 48.7
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 3.5e-68 262.7 288 49.3
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 4.5e-68 262.3 292 49.3
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 8.5e-67 258.1 292 49.7
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 1.9e-66 256.9 296 49.7
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 2.5e-66 256.5 280 49.6
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 1.2e-65 254.2 300 48.7
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 8.0e-65 251.5 271 50.6
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 3.0e-64 249.6 219 58.0
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 1.2e-63 247.7 308 46.8
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 3.3e-63 246.1 292 48.3
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 2.8e-62 243.0 280 47.1
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 2.8e-62 243.0 294 47.6
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 6.3e-62 241.9 286 46.9
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 4.1e-61 239.2 268 48.9
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 4.5e-60 235.7 276 47.1
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 3.2e-58 229.6 299 44.5
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 3.6e-57 226.1 295 45.4
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 3.6e-57 226.1 298 44.3
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 1.3e-54 217.6 299 45.5
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.1e-53 214.5 345 41.2
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 7.0e-53 211.8 318 42.1
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 9.1e-53 211.5 298 42.6
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 2.9e-51 206.5 296 39.9
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 2.8e-49 199.9 246 44.7
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.7e-49 199.1 292 40.4
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 8.0e-49 198.4 172 58.7
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 9.8e-47 191.4 173 56.6
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 1.8e-45 187.2 173 57.2
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 3.9e-43 179.5 148 60.1
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 1.5e-42 177.6 268 38.4
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 1.9e-42 177.2 128 68.0
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 7.3e-42 175.3 119 69.7
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 2.1e-41 173.7 148 58.8
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 6.1e-41 172.2 286 37.8
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 1.4e-40 171.0 289 38.4
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 1.8e-40 170.6 300 38.7
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 8.9e-40 168.3 275 40.0
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 1.5e-39 167.5 282 39.4
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 2.6e-39 166.8 273 39.9
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 6.4e-38 162.2 102 71.6
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 3.2e-37 159.8 103 73.8
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 7.0e-37 158.7 304 37.5
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 2.0e-36 157.1 296 33.8
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 6.0e-36 155.6 320 35.0
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 1.0e-35 154.8 95 76.8
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.2e-33 147.9 116 62.1
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 3.1e-32 143.3 307 32.9
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 7.5e-31 138.7 217 39.6
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 9.8e-31 138.3 205 39.0
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 4.9e-30 136.0 292 32.9
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 8.3e-30 135.2 296 31.8
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 1.1e-29 134.8 175 43.4
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 7.0e-29 132.1 184 42.4
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 9.2e-29 131.7 296 31.4
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 3.4e-23 113.2 140 45.0
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 3.4e-23 113.2 117 51.3
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 9.9e-23 111.7 97 57.7
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 9.9e-23 111.7 210 34.8
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.1e-17 94.0 154 36.4
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.8e-17 93.6 152 36.2
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 8.1e-17 92.0 205 35.1
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 6.8e-16 89.0 149 34.2
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 8.9e-16 88.6 50 80.0
Actinidia34002 Actinidia chinensis HOM05D005869 ORTHO05D007229 5.4e-13 79.3 48 75.0
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.9e-10 70.9 114 35.1
Glyma.12G234900 Glycine max HOM05D005869 ORTHO05D007229 4.3e-10 69.7 51 68.6
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea HOM05D001662 ORTHO05D005318 2.6e-07 60.5 74 44.6


User provided reference genes

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