Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 1.2e-67 259.6 123 100.0
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 1.4e-12 76.6 75 49.3
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 1.6e-11 73.2 73 52.1
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.7e-11 72.4 74 51.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 4.7e-11 71.6 125 35.2
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 6.1e-11 71.2 69 56.5
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.9e-11 70.9 75 50.7
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.9e-11 70.9 75 50.7
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.0e-10 70.5 75 49.3
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.4e-10 70.1 62 53.2
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 1.4e-10 70.1 70 51.4
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 1.4e-10 70.1 71 52.1
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.4e-10 70.1 68 52.9
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 2.3e-10 69.3 70 50.0
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 2.3e-10 69.3 61 57.4
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 3.0e-10 68.9 67 52.2
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 3.0e-10 68.9 84 40.5
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 3.9e-10 68.6 90 41.1
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 6.7e-10 67.8 87 46.0
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.1e-09 67.0 72 48.6
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 1.1e-09 67.0 73 49.3
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.1e-09 67.0 51 60.8
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.5e-09 66.6 71 49.3
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 2.0e-09 66.2 110 37.3
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 2.0e-09 66.2 67 52.2
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 2.6e-09 65.9 73 50.7
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 3.3e-09 65.5 72 47.2
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.3e-09 65.5 72 47.2
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 4.4e-09 65.1 60 50.0
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 5.7e-09 64.7 50 58.0
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 5.7e-09 64.7 82 40.2
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 5.7e-09 64.7 59 57.6
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 7.4e-09 64.3 69 46.4
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.3e-08 63.5 71 46.5
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.3e-08 63.5 71 46.5
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.3e-08 63.5 60 48.3
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.7e-08 63.2 65 47.7
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.7e-08 63.2 65 47.7
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.7e-08 63.2 65 47.7
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 2.2e-08 62.8 39 61.5
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 2.2e-08 62.8 90 40.0
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 3.7e-08 62.0 42 61.9
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 3.7e-08 62.0 80 41.2
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 4.8e-08 61.6 70 45.7
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 6.3e-08 61.2 56 50.0
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 8.2e-08 60.8 74 44.6
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 8.2e-08 60.8 40 62.5
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 8.2e-08 60.8 90 42.2
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.1e-07 60.5 72 41.7
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.1e-07 60.5 104 36.5
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.4e-07 60.1 81 44.4
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.4e-07 60.1 90 42.2
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.8e-07 59.7 71 43.7
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.8e-07 59.7 90 38.9
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 2.4e-07 59.3 67 46.3
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 3.1e-07 58.9 68 41.2
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 3.1e-07 58.9 48 52.1
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 4.1e-07 58.5 49 51.0
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 4.1e-07 58.5 90 38.9
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 5.3e-07 58.2 73 39.7
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 5.3e-07 58.2 60 45.0
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 9.1e-07 57.4 78 43.6
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.2e-06 57.0 68 42.6
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.5e-06 56.6 100 37.0
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.0e-06 56.2 72 44.4
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 2.6e-06 55.8 43 55.8
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 3.4e-06 55.5 49 51.0
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 4.5e-06 55.1 50 50.0
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 4.5e-06 55.1 54 53.7
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 4.5e-06 55.1 49 51.0
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 5.9e-06 54.7 50 50.0
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 5.9e-06 54.7 50 48.0


User provided reference genes

Program Settings