Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.3e-134 483.0 243 100.0
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.8e-83 313.2 238 68.1
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 9.0e-83 310.8 208 67.8
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.2e-82 310.5 235 65.5
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.1e-80 303.9 233 64.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 4.2e-80 302.0 235 63.0
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 7.1e-80 301.2 203 70.4
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 9.3e-80 300.8 237 62.9
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 9.3e-80 300.8 224 63.8
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.2e-79 300.4 229 65.1
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.6e-79 300.1 241 63.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.1e-79 299.7 232 63.4
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 3.5e-79 298.9 234 62.8
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.5e-79 298.9 234 64.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 3.5e-79 298.9 229 65.5
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 4.6e-79 298.5 232 62.1
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 4.6e-79 298.5 229 62.4
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 4.6e-79 298.5 208 67.3
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.8e-78 296.6 199 67.8
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.3e-78 296.2 235 63.0
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.3e-78 296.2 219 65.8
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 5.1e-78 295.0 201 69.2
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 6.7e-78 294.7 235 62.1
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 8.7e-78 294.3 235 62.6
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.1e-77 293.9 238 62.2
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.5e-77 293.5 235 61.3
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.5e-77 293.5 201 68.2
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 2.5e-77 292.7 235 60.4
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.3e-77 292.4 238 59.2
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 4.3e-77 292.0 221 63.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 4.3e-77 292.0 229 62.4
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 5.6e-77 291.6 210 65.7
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 5.6e-77 291.6 208 67.3
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 5.6e-77 291.6 228 61.8
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 5.6e-77 291.6 238 58.4
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 5.6e-77 291.6 218 64.2
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.6e-76 290.0 228 61.8
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.6e-76 290.0 235 61.3
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.6e-76 290.0 235 60.4
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.6e-76 290.0 228 64.5
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.6e-76 290.0 243 60.5
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.1e-76 289.7 202 68.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.1e-76 289.7 243 60.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 3.7e-76 288.9 195 69.2
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 3.7e-76 288.9 236 61.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 6.2e-76 288.1 230 60.4
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-75 287.3 234 62.4
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.1e-75 287.3 226 63.7
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.8e-75 286.6 229 63.3
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.8e-75 286.6 235 60.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 3.1e-75 285.8 229 63.3
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 3.1e-75 285.8 196 67.3
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 4.0e-75 285.4 222 62.6
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.0e-75 285.4 200 68.5
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.3e-75 285.0 200 68.0
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.3e-75 285.0 235 60.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 6.9e-75 284.6 232 62.9
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 6.9e-75 284.6 190 67.9
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 6.9e-75 284.6 236 59.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 9.0e-75 284.3 234 62.0
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.0e-75 284.3 207 67.1
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-74 283.9 225 63.1
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.5e-74 283.5 235 60.4
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.5e-74 283.5 197 67.0
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.0e-74 283.1 208 66.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.6e-74 282.7 236 60.6
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 3.4e-74 282.3 222 62.2
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 3.4e-74 282.3 222 62.2
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 5.8e-74 281.6 222 62.2
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 5.8e-74 281.6 203 63.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 3.8e-73 278.9 249 57.0
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 6.5e-73 278.1 222 61.7
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.1e-72 277.3 230 60.0
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.5e-72 276.2 237 55.7
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 4.2e-72 275.4 233 57.1
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.2e-71 273.9 242 59.9
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.6e-71 273.5 233 58.8
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.6e-71 273.5 223 61.0
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.7e-71 272.7 233 58.8
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.0e-70 270.8 239 58.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.3e-70 270.4 181 71.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.8e-70 270.0 210 62.9
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.3e-70 269.6 206 64.6
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 6.7e-70 268.1 183 67.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.3e-69 265.8 253 54.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 7.4e-69 264.6 275 52.7
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.6e-68 263.5 228 59.2
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.4e-67 260.4 228 57.9
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.0e-65 251.9 238 54.6
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 5.0e-65 251.9 209 57.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 2.5e-64 249.6 241 54.4
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.6e-63 246.9 223 56.1
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 7.9e-63 244.6 286 46.9
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 8.8e-62 241.1 178 65.2
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.8e-60 235.3 173 66.5
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 8.2e-60 234.6 228 56.1
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.5e-58 230.3 163 68.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.3e-57 227.3 235 52.3
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 2.5e-56 223.0 159 64.8
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 6.7e-54 214.9 171 62.0
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 4.8e-52 208.8 205 49.8
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.9e-48 196.8 169 56.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.1e-47 193.4 182 56.0
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 2.2e-44 183.3 147 61.9
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.5e-42 175.6 110 73.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 3.8e-41 172.6 138 63.0
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.0e-38 162.5 113 66.4
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 3.1e-35 152.9 112 65.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.5e-32 144.1 127 57.5
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.5e-32 142.1 110 61.8
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.3e-28 131.0 91 67.0
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 2.7e-26 123.2 85 67.1
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 5.0e-25 119.0 119 56.3
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 8.6e-25 118.2 84 70.2
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.1e-23 113.6 90 61.1
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.4e-22 110.9 79 70.9
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.3e-22 110.2 118 50.8
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-21 107.8 151 42.4
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.1e-19 101.3 79 58.2
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 4.1e-19 99.4 70 64.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.3e-17 94.4 65 66.2
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.2e-14 82.4 72 55.6
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.1e-11 72.8 68 52.9
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 8.6e-09 65.1 51 64.7


User provided reference genes

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