Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 0.0e+00 1276.2 639 100.0
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 9.2e-135 485.0 644 45.0
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 1.2e-134 484.6 598 46.8
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 2.4e-127 460.3 604 45.4
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.0e-126 457.2 650 42.9
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 2.0e-126 457.2 602 45.3
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 2.3e-125 453.8 576 45.7
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.3e-124 449.9 598 44.6
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 6.2e-123 445.7 599 44.1
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.3e-122 443.7 603 44.1
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 5.2e-122 442.6 643 42.6
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.0e-121 440.7 615 43.4
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 4.9e-120 436.0 623 43.2
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 4.1e-119 433.0 636 41.7
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 7.0e-119 432.2 598 43.1
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 9.2e-119 431.8 600 42.2
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 9.2e-119 431.8 578 44.1
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 4.6e-118 429.5 616 43.0
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 2.3e-117 427.2 641 41.0
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 3.0e-117 426.8 634 40.9
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 3.9e-117 426.4 646 40.9
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 3.9e-117 426.4 576 43.8
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 5.0e-117 426.0 608 41.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 1.9e-116 424.1 613 40.5
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.9e-116 424.1 683 39.4
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 1.9e-116 424.1 683 40.0
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 3.3e-116 423.3 605 41.7
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 3.3e-116 423.3 603 42.1
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 9.5e-116 421.8 667 40.0
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 3.6e-115 419.9 597 41.9
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 6.2e-115 419.1 632 40.7
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.1e-114 418.3 638 40.9
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.1e-114 418.3 616 41.2
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.4e-114 417.9 601 40.8
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.4e-114 417.9 604 42.2
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.8e-114 417.5 593 41.8
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.3e-114 417.2 595 41.7
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 5.2e-114 416.0 654 40.4
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 8.9e-114 415.2 602 42.4
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 1.2e-113 414.8 597 42.5
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 1.5e-113 414.5 640 41.1
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 5.8e-113 412.5 636 40.3
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 7.5e-113 412.1 641 40.2
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 7.5e-113 412.1 609 41.7
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 7.5e-113 412.1 605 40.8
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 3.7e-112 409.8 613 41.1
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.4e-111 407.9 617 42.0
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.9e-111 407.5 599 40.1
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 2.4e-111 407.1 613 40.6
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 2.4e-111 407.1 638 40.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 4.1e-111 406.4 625 40.0
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 7.1e-111 405.6 632 39.9
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 9.2e-111 405.2 610 42.0
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 9.2e-111 405.2 597 40.7
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 3.5e-110 403.3 629 40.4
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 2.3e-109 400.6 611 40.9
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 3.9e-109 399.8 618 40.3
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 3.9e-109 399.8 609 39.2
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 6.6e-109 399.1 650 38.9
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 8.6e-109 398.7 602 40.9
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 1.1e-108 398.3 618 40.3
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.9e-108 397.5 611 40.4
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 4.3e-108 396.4 614 40.1
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 3.6e-107 393.3 643 38.7
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 3.6e-107 393.3 627 38.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 6.2e-107 392.5 640 39.5
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.3e-106 390.6 652 40.2
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.5e-105 387.9 609 40.7
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 9.9e-105 385.2 615 41.1
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 9.9e-105 385.2 628 40.4
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.7e-104 384.4 667 37.9
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.8e-104 383.3 601 39.1
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.2e-102 378.3 594 41.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 1.0e-101 375.2 567 41.4
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 2.3e-101 374.0 569 39.0
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 7.3e-100 369.0 681 35.7
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 2.1e-99 367.5 584 38.0
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 3.1e-98 363.6 521 40.9
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.2e-97 361.7 621 37.7
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 3.5e-94 350.1 573 37.9
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 8.7e-93 345.5 640 37.0
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.1e-92 345.1 506 40.1
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 4.8e-91 339.7 469 42.0
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 1.9e-87 327.8 571 37.0
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 9.3e-87 325.5 582 36.3
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 7.9e-86 322.4 488 41.4
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 4.3e-84 316.6 391 46.0
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 2.0e-81 307.8 647 35.2
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 1.4e-79 301.6 447 43.0
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 9.3e-79 298.9 445 40.7
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.0e-77 293.9 628 33.4
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 3.9e-77 293.5 618 34.0
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 4.3e-76 290.0 482 39.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.6e-75 288.1 402 42.5
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.2e-75 285.8 439 40.3
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 5.3e-74 283.1 392 43.9
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 2.6e-73 280.8 365 42.7
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 7.6e-73 279.3 459 38.1
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 5.5e-71 273.1 440 37.0
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 1.5e-68 265.0 441 37.9
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 2.0e-65 254.6 396 40.7
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 1.3e-51 208.8 587 27.9
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 3.1e-42 177.6 602 26.9
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 3.7e-35 154.1 183 45.4
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 8.2e-35 152.9 305 35.7
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.6e-33 148.7 300 33.7
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.9e-31 141.7 224 37.5
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 1.6e-30 138.7 202 40.6
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 2.3e-24 118.2 240 35.4
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 4.7e-22 110.5 231 31.2
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 6.1e-22 110.2 162 39.5
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 8.9e-21 106.3 376 29.3
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.4e-18 98.2 212 31.6
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 4.1e-18 97.4 111 52.3
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.2e-12 79.3 71 59.2
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 4.9e-11 73.9 67 53.7
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 4.1e-10 70.9 82 52.4
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.0e-09 68.6 59 59.3
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 4.6e-09 67.4 104 38.5


User provided reference genes

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