Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 5.6e-167 590.9 301 100.0
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 5.5e-98 361.7 270 65.2
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 2.1e-97 359.8 300 61.0
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 2.7e-97 359.4 263 67.3
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 6.1e-97 358.2 262 68.3
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 8.0e-97 357.8 266 68.0
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 6.7e-96 354.8 307 61.2
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 8.8e-96 354.4 255 68.2
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 2.6e-95 352.8 260 66.9
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 3.3e-95 352.4 278 62.6
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 5.7e-95 351.7 269 63.2
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.7e-94 350.1 292 62.0
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 4.8e-94 348.6 259 66.0
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 6.3e-94 348.2 267 63.7
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 8.2e-94 347.8 264 64.4
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.4e-93 347.1 293 62.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.8e-93 346.7 267 64.0
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 1.8e-93 346.7 253 68.0
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.4e-93 346.3 301 59.5
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 4.1e-93 345.5 262 63.7
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 7.0e-93 344.7 276 61.6
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 9.1e-93 344.4 267 64.8
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 2.0e-92 343.2 257 65.0
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 2.6e-92 342.8 332 56.6
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 5.9e-92 341.7 257 64.2
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.7e-91 340.1 267 64.0
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.7e-91 340.1 272 63.2
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 2.9e-91 339.3 265 64.5
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 3.8e-91 339.0 269 61.7
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 5.0e-91 338.6 264 64.4
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 8.5e-91 337.8 270 62.6
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.1e-90 337.4 272 62.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.1e-90 337.4 260 65.8
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 3.2e-90 335.9 228 71.9
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 5.5e-90 335.1 276 60.9
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 9.4e-90 334.3 265 64.2
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 9.4e-90 334.3 256 64.5
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.2e-89 334.0 257 64.2
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 1.2e-89 334.0 307 56.4
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.2e-89 334.0 267 63.7
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.6e-89 333.6 240 67.9
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.6e-89 333.6 264 63.6
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 3.6e-89 332.4 273 61.2
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 4.7e-89 332.0 259 64.1
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 1.0e-88 330.9 305 55.7
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.0e-88 330.9 268 60.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 1.8e-88 330.1 257 62.6
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 2.3e-88 329.7 235 67.2
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 5.2e-88 328.6 248 66.1
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 5.2e-88 328.6 256 64.1
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 8.8e-88 327.8 264 63.3
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 8.8e-88 327.8 239 67.4
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 8.8e-88 327.8 265 62.6
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.2e-87 327.4 273 60.8
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.2e-87 327.4 259 64.1
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 2.6e-87 326.2 263 63.9
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 5.7e-87 325.1 256 63.7
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 7.5e-87 324.7 274 60.9
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 7.5e-87 324.7 277 60.6
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 9.7e-87 324.3 263 63.5
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 3.7e-86 322.4 239 66.9
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 3.7e-86 322.4 289 56.4
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.4e-85 320.5 253 63.2
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 4.1e-85 318.9 260 62.7
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 5.3e-85 318.5 263 60.5
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.2e-84 317.4 264 61.4
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 3.5e-84 315.8 242 64.9
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 4.5e-84 315.5 297 54.9
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.3e-83 313.9 243 63.8
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 1.3e-83 313.9 270 58.9
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.7e-83 313.5 277 58.5
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.7e-83 313.5 258 60.1
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 6.5e-83 311.6 278 57.9
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 8.5e-83 311.2 301 54.2
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.1e-82 310.8 306 56.5
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.9e-82 310.1 261 60.9
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 4.2e-82 308.9 254 60.6
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 9.4e-82 307.8 288 58.0
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 4.7e-81 305.4 256 58.6
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 6.1e-81 305.1 225 66.7
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 6.1e-81 305.1 260 59.6
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 8.8e-80 301.2 277 55.6
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 2.6e-79 299.7 277 55.6
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 4.4e-79 298.9 277 55.6
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 4.4e-79 298.9 277 55.6
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 5.7e-79 298.5 277 55.2
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 7.5e-79 298.1 225 64.4
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 9.8e-79 297.7 277 54.9
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.7e-78 297.0 242 61.2
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.8e-77 293.5 265 58.1
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 7.7e-76 288.1 231 63.6
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 7.7e-76 288.1 263 56.3
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.5e-74 283.9 232 62.5
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.5e-74 283.1 232 62.1
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.2e-73 280.8 286 54.9
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.6e-73 280.4 232 62.1
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 2.8e-73 279.6 261 55.6
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 3.0e-72 276.2 267 54.7
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 4.0e-72 275.8 288 52.4
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 5.7e-71 271.9 252 54.0
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 7.8e-68 261.5 254 53.1
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 5.6e-66 255.4 231 57.1
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 6.1e-65 251.9 236 53.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 5.2e-64 248.8 230 57.0
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 6.8e-64 248.4 180 67.8
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 3.6e-57 226.1 220 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 4.0e-56 222.6 274 46.0
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.2e-52 211.1 148 71.6
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 8.6e-51 204.9 209 52.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.9e-50 203.8 205 49.3
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 6.2e-25 119.0 222 34.7
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.7e-22 110.9 134 44.0
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.5e-20 103.2 246 30.9
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.9e-20 102.1 122 48.4
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 7.1e-13 79.0 62 58.1
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 7.1e-13 79.0 62 58.1
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.3e-10 70.1 232 28.9


User provided reference genes

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