Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000421 Vanilla planifolia HOM05D000094 ORTHO05D017818 1.2e-92 344.0 296 100.0
HPP92_000354 Vanilla planifolia HOM05D000094 ORTHO05D017818 2.2e-35 153.7 77 98.7
CDE09G1099 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 1.7e-27 127.5 258 66.7
Nn1g09888 Nelumbo nucifera HOM05D000094 ORTHO05D002388 2.2e-27 127.1 241 76.8
Os01g0917500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D002388 1.1e-26 124.8 241 77.2
DCAR_023799 Daucus carota HOM05D000094 ORTHO05D002388 3.6e-25 119.8 241 72.6
Aqoxy2G04065 Aquilegia oxysepala HOM05D000094 ORTHO05D002388 1.2e-23 114.8 265 66.8
Migut.G01136 Erythranthe guttata HOM05D000094 ORTHO05D002388 8.3e-22 108.6 95 55.8
Dinv44210 Davidia involucrata HOM05D000094 ORTHO05D017818 1.0e-19 101.7 240 68.3
CDE02G2519 Ceratophyllum demersum HOM05D000094 ORTHO05D017818 1.3e-19 101.3 95 52.6
EL10Ac3g07393 Beta vulgaris HOM05D000094 ORTHO05D002388 1.1e-18 98.2 235 67.7
Lj3C358T0 Lonicera japonica HOM05D000094 ORTHO05D002388 1.5e-18 97.8 219 76.7
TAR362G0036 Trochodendron aralioides HOM05D000094 ORTHO05D002388 2.5e-18 97.1 219 77.6
AUR62021297 Chenopodium quinoa HOM05D000094 ORTHO05D002388 7.2e-18 95.5 236 72.0
SGA_v2.0_scaffold17G08040 Striga asiatica HOM05D000094 ORTHO05D002388 1.0e-16 91.7 64 67.2
PSO017G1116 Papaver somniferum HOM05D000094 ORTHO05D002388 6.8e-16 89.0 69 59.4
PSO675G4842 Papaver somniferum HOM05D000094 ORTHO05D002388 6.8e-16 89.0 69 59.4
Peaxi162Scf00610g00312 Petunia axillaris HOM05D000306 ORTHO05D000410 1.5e-15 87.8 79 54.4
Peaxi162Scf00610g00314 Petunia axillaris HOM05D000306 ORTHO05D017818 1.5e-15 87.8 79 54.4
Sc25g0005630 Simmondsia chinensis HOM05D000094 ORTHO05D002388 3.4e-15 86.7 223 74.9
Zm00001eb143420 Zea mays HOM05D000094 ORTHO05D002388 4.4e-15 86.3 231 74.0
ATR1147G009 Amborella trichopoda HOM05D000094 ORTHO05D002388 1.3e-14 84.7 67 58.2
Dinv22707 Davidia involucrata HOM05D000094 ORTHO05D002388 1.7e-14 84.3 222 75.2
Zm00001eb236440 Zea mays HOM05D000094 ORTHO05D002388 2.2e-14 84.0 218 76.6
Actinidia39097 Actinidia chinensis HOM05D000094 ORTHO05D002388 3.7e-14 83.2 221 74.2
CSS0018977 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 6.3e-14 82.4 225 68.0
CSS0020762 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 8.3e-14 82.0 225 68.0
HanXRQChr10g0293951 Helianthus annuus HOM05D000094 ORTHO05D020417 8.3e-14 82.0 67 55.2
AUR62020939 Chenopodium quinoa HOM05D000094 ORTHO05D002388 1.1e-13 81.6 67 55.2
Ah.04g149870 Amaranthus hybridus HOM05D000094 ORTHO05D002388 2.4e-13 80.5 67 56.7
HanXRQChr10g0293931 Helianthus annuus HOM05D000094 ORTHO05D002388 2.4e-13 80.5 220 72.3
AUR62018484 Chenopodium quinoa HOM05D000094 ORTHO05D002388 3.1e-13 80.1 233 63.5
Actinidia26044 Actinidia chinensis HOM05D000094 ORTHO05D002388 4.1e-13 79.7 219 68.9
SEGI_06180 Sequoiadendron giganteum HOM05D000094 ORTHO05D002388 9.2e-13 78.6 212 70.3
CAN.G710.52 Capsicum annuum HOM05D000094 ORTHO05D002388 1.6e-12 77.8 50 68.0
PGSC0003DMG400021622 Solanum tuberosum HOM05D000094 ORTHO05D002388 1.6e-12 77.8 50 68.0
HanXRQChr14g0436271 Helianthus annuus HOM05D000094 ORTHO05D020417 2.0e-12 77.4 216 74.5
Peaxi162Scf00286g00028 Petunia axillaris HOM05D000094 ORTHO05D002388 3.5e-12 76.6 197 79.7
AUR62033214 Chenopodium quinoa HOM05D000094 ORTHO05D002388 1.0e-11 75.1 65 52.3
Nitab4.5_0006213g0030 Nicotiana tabacum HOM05D000094 ORTHO05D002388 1.3e-11 74.7 50 66.0
HanXRQChr15g0470271 Helianthus annuus HOM05D000094 ORTHO05D020417 1.7e-11 74.3 58 58.6
Nitab4.5_0002313g0050 Nicotiana tabacum HOM05D000094 ORTHO05D002388 2.3e-11 73.9 50 64.0
Rhsim02G0071600 Rhododendron simsii HOM05D000094 ORTHO05D002388 3.8e-11 73.2 50 64.0
Solyc09g098420.3 Solanum lycopersicum HOM05D000094 ORTHO05D002388 3.8e-11 73.2 50 66.0
Sopen09g036350 Solanum pennellii HOM05D000094 ORTHO05D002388 3.8e-11 73.2 50 66.0
MBI01_g32849_MAGBIO Magnolia biondii HOM05D038141 ORTHO05D017818 1.5e-10 71.2 48 66.7
Gohir.A09G180200 Gossypium hirsutum HOM05D000094 ORTHO05D002388 1.9e-10 70.9 63 54.0
Hma1.2p1_1286F.1_g273120 Hydrangea macrophylla HOM05D000094 ORTHO05D002388 1.9e-10 70.9 238 63.0
Cc03_g10840 Coffea canephora HOM05D000094 ORTHO05D002388 2.5e-10 70.5 196 79.6
A10p29040 Brassica napus HOM05D000094 ORTHO05D002388 3.3e-10 70.1 63 54.0
BraA10t44952Z Brassica rapa HOM05D000094 ORTHO05D002388 3.3e-10 70.1 63 54.0
Thecc.03G172900 Theobroma cacao HOM05D000094 ORTHO05D002388 4.3e-10 69.7 63 52.4
TWI14G0045 Tripterygium wilfordii HOM05D000094 ORTHO05D002388 4.3e-10 69.7 65 49.2
Carub.0006s0624 Capsella rubella HOM05D000094 ORTHO05D002388 5.6e-10 69.3 63 54.0
TWI39G1282 Tripterygium wilfordii HOM05D000094 ORTHO05D002388 5.6e-10 69.3 63 50.8
Sed0003692 Sechium edule HOM05D000094 ORTHO05D002388 7.3e-10 68.9 63 52.4
Gorai.004G120000 Gossypium raimondii HOM05D000094 ORTHO05D002388 2.1e-09 67.4 63 50.8
GSVIVG01025718001 Vitis vinifera HOM05D000094 ORTHO05D017818 2.1e-09 67.4 222 69.8
Oeu050347.1 Olea europaea HOM05D000094 ORTHO05D002388 2.8e-09 67.0 50 60.0
COL.COLO4_14282 Corchorus olitorius HOM05D000094 ORTHO05D034865 3.6e-09 66.6 63 49.2
Ciclev10004265m.g Citrus clementina HOM05D000094 ORTHO05D002388 4.7e-09 66.2 237 64.1
Atru.chr1.486 Acer truncatum HOM05D000094 ORTHO05D002388 1.4e-08 64.7 63 47.6
Lj1C994T10 Lonicera japonica HOM05D000094 ORTHO05D002388 1.4e-08 64.7 63 49.2
TAR633G0483 Trochodendron aralioides HOM05D000094 ORTHO05D002388 1.4e-08 64.7 71 40.8
Actinidia03114 Actinidia chinensis HOM05D000094 ORTHO05D002388 1.8e-08 64.3 63 49.2
Nn2g11555 Nelumbo nucifera HOM05D000094 ORTHO05D002388 3.0e-08 63.5 71 39.4
SMO145G0052 Selaginella moellendorffii HOM05D000094 ORTHO05D002388 3.0e-08 63.5 67 44.8
DCAR_018185 Daucus carota HOM05D000094 ORTHO05D002388 4.0e-08 63.2 67 43.3
THA.LOC104818278 Tarenaya hassleriana HOM05D000094 ORTHO05D002388 4.0e-08 63.2 65 47.7
Oeu040515.1 Olea europaea HOM05D000094 ORTHO05D002388 6.8e-08 62.4 57 49.1
QL09p014617 Quercus lobata HOM05D000094 ORTHO05D002388 8.9e-08 62.0 63 47.6
CiPaw.03G104200 Carya illinoinensis HOM05D000094 ORTHO05D002388 1.5e-07 61.2 63 46.0
FAN10G0047 Fragaria x ananassa HOM05D000094 ORTHO05D002388 1.5e-07 61.2 63 46.0
FAN03G1247 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.0e-07 60.8 63 44.4
Lsat_1_v5_gn_2_48221 Lactuca sativa HOM05D000094 ORTHO05D002388 2.0e-07 60.8 218 70.6
FvH4_7g29180 Fragaria vesca HOM05D000094 ORTHO05D002388 2.6e-07 60.5 63 44.4
FAN01G2743 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.6e-07 60.5 63 44.4
FAN06G2413 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.6e-07 60.5 63 44.4
FAN06G5003 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.6e-07 60.5 63 44.4
Psat6g205600 Pisum sativum HOM05D000129 ORTHO05D030445 2.6e-07 60.5 136 29.4
Rhsim09G0197300 Rhododendron simsii HOM05D000094 ORTHO05D002388 2.6e-07 60.5 63 46.0
ECA232G0360 Erigeron canadensis HOM05D000094 ORTHO05D002388 3.4e-07 60.1 47 55.3
vmacro09844 Vaccinium macrocarpon HOM05D000094 ORTHO05D002388 3.4e-07 60.1 63 46.0
CDE07G1342 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 5.7e-07 59.3 67 43.3
FAN03G0530 Fragaria x ananassa HOM05D000094 ORTHO05D002388 5.7e-07 59.3 67 41.8
MD05G1075800 Malus domestica HOM05D000021 ORTHO05D000010 7.5e-07 58.9 75 44.0
Duzib106G1339 Durio zibethinus HOM05D000021 ORTHO05D000010 9.8e-07 58.5 76 42.1
Cc09_g05670 Coffea canephora HOM05D000021 ORTHO05D000010 1.3e-06 58.2 84 39.3
Cpa.g.sc85.86 Carica papaya HOM05D000570 ORTHO05D005344 2.2e-06 57.4 65 41.5
Os09g0293500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D001414 2.2e-06 57.4 62 43.5
Pp3c17_21540 Physcomitrium patens HOM05D000094 ORTHO05D002388 2.2e-06 57.4 57 49.1
arahy.Tifrunner.gnm1.ann1.DNYC70 Arachis hypogaea HOM05D000106 ORTHO05D001887 2.9e-06 57.0 79 44.3
MSTRG.27127 Avicennia marina HOM05D000094 ORTHO05D002388 2.9e-06 57.0 64 48.4
Duzib205G1047 Durio zibethinus HOM05D000094 ORTHO05D002388 2.9e-06 57.0 63 44.4
HanXRQChr09g0253741 Helianthus annuus HOM05D000094 ORTHO05D002388 2.9e-06 57.0 46 52.2
ClCG05G007920 Citrullus lanatus HOM05D000094 ORTHO05D002388 3.7e-06 56.6 63 44.4
MD01G1198500 Malus domestica HOM05D000094 ORTHO05D002388 3.7e-06 56.6 63 41.3
Haze_16590 Corylus avellana HOM05D000311 ORTHO05D000183 6.4e-06 55.8 103 37.9
Gohir.D05G338700 Gossypium hirsutum HOM05D000054 ORTHO05D000171 6.4e-06 55.8 100 35.0
Gorai.009G363600 Gossypium raimondii HOM05D000054 ORTHO05D000171 6.4e-06 55.8 100 35.0
Lj6g0001898 Lotus japonicus HOM05D000106 ORTHO05D001887 6.4e-06 55.8 76 43.4
C09p46250 Brassica napus HOM05D004495 ORTHO05D005361 8.3e-06 55.5 100 35.0
BolC9t57489H Brassica oleracea HOM05D004495 ORTHO05D005361 8.3e-06 55.5 100 35.0
CiPaw.12G005100 Carya illinoinensis HOM05D001506 ORTHO05D000455 8.3e-06 55.5 58 43.1
Lj3P376T33 Lonicera japonica HOM05D000094 ORTHO05D002388 8.3e-06 55.5 38 63.2


User provided reference genes

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