Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 2.4e-193 678.7 351 100.0
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 4.0e-124 448.7 656 47.1
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 2.3e-63 246.9 643 30.5
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 9.7e-62 241.5 652 29.3
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 2.2e-61 240.4 651 30.6
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 3.7e-61 239.6 658 29.9
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 5.3e-60 235.7 654 30.3
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 9.1e-60 235.0 667 28.3
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 2.6e-59 233.4 654 28.9
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 2.6e-59 233.4 655 28.9
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 4.5e-59 232.6 652 30.8
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 4.5e-59 232.6 659 29.3
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 5.9e-59 232.3 647 29.1
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 5.9e-59 232.3 652 29.3
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 1.0e-58 231.5 652 29.3
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 1.0e-58 231.5 663 28.8
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 1.7e-58 230.7 658 30.1
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 2.2e-58 230.3 658 29.0
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 2.2e-58 230.3 653 30.5
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 2.9e-58 229.9 658 28.6
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 8.5e-58 228.4 608 30.3
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 3.2e-57 226.5 665 28.6
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 2.7e-56 223.4 649 27.9
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 3.6e-56 223.0 646 29.6
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 4.7e-56 222.6 634 28.2
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 6.1e-56 222.2 673 29.7
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 1.4e-55 221.1 682 28.0
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 2.3e-55 220.3 624 29.3
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 5.1e-55 219.2 658 28.6
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 5.1e-55 219.2 658 29.0
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 5.1e-55 219.2 690 27.2
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 6.7e-55 218.8 649 29.7
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 8.8e-55 218.4 658 28.9
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 8.8e-55 218.4 642 27.3
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 1.1e-54 218.0 618 29.9
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 1.1e-54 218.0 655 28.5
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 1.5e-54 217.6 652 29.6
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 2.0e-54 217.2 658 29.6
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 4.4e-54 216.1 658 28.7
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 4.4e-54 216.1 653 28.2
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 4.4e-54 216.1 623 29.2
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 5.7e-54 215.7 653 28.0
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 9.7e-54 214.9 655 28.9
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.7e-53 214.2 658 27.4
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 1.7e-53 214.2 643 29.2
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 2.2e-53 213.8 649 28.5
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 2.2e-53 213.8 655 28.1
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 2.2e-53 213.8 649 28.2
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 2.8e-53 213.4 659 29.1
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 3.7e-53 213.0 650 28.0
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 6.3e-53 212.2 658 28.9
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 1.1e-52 211.5 652 28.7
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 1.4e-52 211.1 658 27.5
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.8e-52 210.7 591 28.3
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 2.4e-52 210.3 658 28.0
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 2.4e-52 210.3 650 28.8
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 2.4e-52 210.3 656 29.4
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 3.1e-52 209.9 644 28.1
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 3.1e-52 209.9 658 27.1
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 3.1e-52 209.9 658 27.1
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 7.0e-52 208.8 647 28.7
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 7.0e-52 208.8 659 29.0
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 9.1e-52 208.4 656 28.0
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 9.1e-52 208.4 625 30.7
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 1.2e-51 208.0 657 27.5
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 2.6e-51 206.8 654 26.6
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 5.9e-51 205.7 656 26.8
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 5.9e-51 205.7 649 28.2
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 1.3e-50 204.5 667 28.8
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 1.3e-50 204.5 651 28.3
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 2.2e-50 203.8 384 33.1
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 3.8e-50 203.0 652 28.2
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 3.8e-50 203.0 408 35.3
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 5.0e-50 202.6 666 28.5
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 5.0e-50 202.6 658 26.6
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 5.0e-50 202.6 651 28.1
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 8.5e-50 201.8 648 25.9
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 1.9e-49 200.7 656 28.2
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 1.9e-49 200.7 641 26.4
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 1.9e-49 200.7 645 27.6
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 2.5e-49 200.3 661 28.4
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 2.5e-49 200.3 661 28.4
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 9.4e-49 198.4 654 28.6
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 1.2e-48 198.0 657 27.4
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 1.6e-48 197.6 674 26.9
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 2.1e-48 197.2 661 28.0
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 2.1e-48 197.2 661 28.0
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 2.1e-48 197.2 507 31.2
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 2.1e-48 197.2 425 31.5
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 2.1e-48 197.2 656 27.4
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 2.7e-48 196.8 656 27.3
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 3.6e-48 196.4 649 27.7
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 4.7e-48 196.1 647 27.8
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 6.1e-48 195.7 690 26.8
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 8.0e-48 195.3 535 28.4
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 1.0e-47 194.9 677 27.5
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.4e-47 194.5 429 33.8
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 1.4e-47 194.5 650 26.9
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 1.8e-47 194.1 658 26.7
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 3.0e-47 193.4 640 27.7
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 5.2e-47 192.6 653 27.4
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 5.2e-47 192.6 652 27.0
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 6.7e-47 192.2 653 26.5
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.1e-46 191.4 637 26.2
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 2.0e-46 190.7 651 27.3
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 2.6e-46 190.3 401 32.7
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 4.4e-46 189.5 608 27.6
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 5.7e-46 189.1 648 27.2
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 5.7e-46 189.1 635 26.8
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 9.7e-46 188.3 651 27.8
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 9.7e-46 188.3 609 27.9
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 2.2e-45 187.2 650 27.2
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 3.7e-45 186.4 631 27.4
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 4.8e-45 186.0 609 27.6
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.1e-44 184.9 388 33.8
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 7.0e-44 182.2 626 27.3
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 7.0e-44 182.2 655 26.4
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 7.0e-44 182.2 547 29.3
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 9.1e-44 181.8 462 31.8
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.8e-42 176.4 579 27.6
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 3.8e-42 176.4 215 46.5
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 3.2e-41 173.3 604 27.2
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.2e-40 171.4 608 26.8
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 1.6e-40 171.0 457 30.2
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.1e-40 170.6 424 29.0
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 2.7e-40 170.2 605 25.8
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 3.6e-40 169.9 424 29.0
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 2.3e-39 167.2 243 44.0
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 8.8e-39 165.2 607 26.9
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 4.4e-38 162.9 670 24.3
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 1.7e-37 161.0 186 47.3
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 4.8e-37 159.5 647 24.9
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 4.8e-37 159.5 635 26.1
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 6.3e-37 159.1 419 28.6
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 2.4e-36 157.1 206 44.2
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 4.1e-36 156.4 589 23.9
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 7.0e-36 155.6 686 25.5
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 1.7e-34 151.0 368 32.1
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 4.2e-33 146.4 207 41.5
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 8.0e-32 142.1 204 41.7
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 1.0e-31 141.7 658 24.3
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 3.0e-31 140.2 671 24.0
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 2.0e-30 137.5 186 44.6
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.8e-28 131.0 180 46.1
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 1.9e-25 120.9 271 33.2
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.6e-24 116.7 317 30.6
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 2.2e-21 107.5 193 38.9
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 4.9e-21 106.3 429 26.1
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 9.2e-20 102.1 317 28.7
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 5.0e-18 96.3 173 35.3
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.5e-17 94.7 143 40.6
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.4e-15 88.2 347 26.2
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 2.3e-15 87.4 333 26.4
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 3.1e-15 87.0 199 31.7
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 1.7e-10 71.2 134 35.8
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 6.6e-10 69.3 328 24.4
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 1.1e-09 68.6 49 69.4
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 9.5e-09 65.5 46 69.6
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.1e-08 64.3 72 52.8
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 3.6e-08 63.5 53 58.5
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 2.3e-07 60.8 143 30.8
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 5.8e-06 56.2 146 31.5


User provided reference genes

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