Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 0.0e+00 1174.5 610 100.0
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 1.8e-47 194.9 355 40.3
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 6.9e-47 193.0 341 39.6
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 5.8e-46 189.9 661 30.3
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 9.9e-46 189.1 352 39.5
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 1.3e-45 188.7 429 35.4
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 3.8e-45 187.2 290 43.1
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 6.4e-45 186.4 276 46.0
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 1.4e-44 185.3 263 44.9
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 7.1e-44 183.0 276 42.0
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 9.3e-44 182.6 272 42.3
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 1.6e-43 181.8 280 43.2
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 4.6e-43 180.3 292 41.8
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 1.0e-42 179.1 277 41.9
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 1.3e-42 178.7 331 40.8
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 1.7e-42 178.3 281 43.1
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.3e-42 177.9 280 42.9
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 5.1e-42 176.8 280 42.5
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 6.6e-42 176.4 268 42.2
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 6.6e-42 176.4 370 35.1
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 1.1e-41 175.6 278 41.4
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 1.5e-41 175.3 344 38.7
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 2.5e-41 174.5 268 41.8
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.5e-41 174.5 402 36.1
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 7.4e-41 172.9 343 38.2
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 7.4e-41 172.9 403 36.5
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 7.4e-41 172.9 281 42.3
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 1.6e-40 171.8 295 40.0
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 1.6e-40 171.8 417 36.0
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.1e-40 171.4 409 35.9
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 4.8e-40 170.2 288 42.7
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 8.1e-40 169.5 348 37.9
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 1.4e-39 168.7 452 32.7
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.4e-39 167.9 274 44.2
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.4e-39 167.9 274 44.2
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 2.4e-39 167.9 262 44.3
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 9.0e-39 166.0 336 36.0
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 1.2e-38 165.6 327 36.7
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 1.2e-38 165.6 275 41.1
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 1.5e-38 165.2 433 33.5
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 1.5e-38 165.2 283 43.8
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 1.5e-38 165.2 401 35.7
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 2.0e-38 164.9 278 39.6
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 2.6e-38 164.5 417 33.3
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 5.8e-38 163.3 288 42.0
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 5.8e-38 163.3 423 34.8
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 7.6e-38 162.9 640 28.6
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 7.6e-38 162.9 261 41.4
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 9.9e-38 162.5 274 39.8
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 9.9e-38 162.5 382 35.1
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.2e-37 161.4 390 35.4
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 2.2e-37 161.4 306 40.8
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 2.2e-37 161.4 567 32.8
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 2.2e-37 161.4 277 40.1
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 2.2e-37 161.4 280 38.6
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 2.9e-37 161.0 286 40.2
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 2.9e-37 161.0 555 30.3
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 4.9e-37 160.2 277 41.5
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 6.4e-37 159.8 576 31.1
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 1.1e-36 159.1 295 42.0
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 1.9e-36 158.3 286 37.8
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 4.2e-36 157.1 421 34.2
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 5.5e-36 156.8 643 29.5
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 7.1e-36 156.4 409 33.3
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 7.1e-36 156.4 287 40.4
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 9.3e-36 156.0 279 39.8
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 2.1e-35 154.8 278 40.6
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 2.1e-35 154.8 318 35.5
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 2.1e-35 154.8 286 41.6
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 2.7e-35 154.5 298 39.9
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.7e-35 154.5 362 36.5
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.5e-35 154.1 430 32.3
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 3.5e-35 154.1 267 39.3
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 6.0e-35 153.3 284 35.6
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 1.0e-34 152.5 611 28.6
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 1.3e-34 152.1 392 33.4
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.3e-34 151.4 280 38.9
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 3.9e-34 150.6 286 36.7
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 5.1e-34 150.2 287 36.9
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 5.1e-34 150.2 277 41.5
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 8.7e-34 149.4 275 36.4
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.1e-33 149.1 388 32.7
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 1.5e-33 148.7 611 28.3
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 1.9e-33 148.3 254 40.9
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 1.9e-33 148.3 286 38.8
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 3.3e-33 147.5 350 35.7
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 3.3e-33 147.5 406 34.0
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.3e-32 145.6 417 32.6
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 1.6e-32 145.2 267 36.7
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 1.6e-32 145.2 267 36.7
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 2.1e-32 144.8 293 37.2
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 2.1e-32 144.8 293 37.2
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 2.1e-32 144.8 369 34.7
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 2.8e-32 144.4 253 39.5
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 3.7e-32 144.1 277 40.1
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 3.7e-32 144.1 438 32.6
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 2.4e-31 141.4 268 39.6
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 3.1e-31 141.0 583 30.5
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 3.1e-31 141.0 501 30.3
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 4.0e-31 140.6 285 35.8
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 1.2e-30 139.0 289 36.0
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 1.2e-30 139.0 289 36.0
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 2.0e-30 138.3 311 34.4
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 4.9e-29 133.7 212 39.6
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 6.5e-29 133.3 257 38.9
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 1.4e-28 132.1 330 35.2
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 1.9e-28 131.7 392 31.6
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 1.2e-27 129.0 255 39.6
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 1.6e-27 128.6 419 32.0
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 2.1e-27 128.3 288 35.1
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 4.3e-25 120.6 261 39.1
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 2.4e-23 114.8 277 31.0
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 4.1e-23 114.0 327 34.3
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 2.2e-21 108.2 284 33.5
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 5.5e-20 103.6 263 35.0
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 3.9e-18 97.4 242 33.1
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 6.7e-18 96.7 199 38.2
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 5.7e-17 93.6 495 26.9
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 7.4e-17 93.2 275 30.5
Mapoly0062s0031 Marchantia polymorpha HOM05D005322 ORTHO05D006746 9.7e-17 92.8 406 26.8
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 8.2e-16 89.7 163 37.4
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 1.1e-15 89.4 251 33.1
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 1.2e-14 85.9 225 31.1
Zm00001eb345140 Zea mays HOM05D005322 ORTHO05D006746 7.7e-14 83.2 259 29.0
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 5.5e-12 77.0 249 30.5
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 1.5e-09 68.9 235 32.3


User provided reference genes

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