Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000372 Vanilla planifolia HOM05D002880 ORTHO05D431189 2.1e-97 359.0 181 100.0
HPP92_000393 Vanilla planifolia HOM05D002880 ORTHO05D003450 1.3e-09 67.4 132 40.2
HPP92_000451 Vanilla planifolia HOM05D002880 ORTHO05D003450 1.3e-09 67.4 132 40.2
MBI09_g12804_MAGBIO Magnolia biondii HOM05D002880 ORTHO05D003450 7.1e-08 61.6 164 32.9
MD15G1245900 Malus domestica HOM05D002880 ORTHO05D003450 2.7e-07 59.7 148 35.1
TWI09G0522 Tripterygium wilfordii HOM05D002880 ORTHO05D003450 3.5e-07 59.3 148 35.8
MD02G1132600 Malus domestica HOM05D002880 ORTHO05D003450 7.8e-07 58.2 148 35.1
Gohir.D03G009500 Gossypium hirsutum HOM05D002880 ORTHO05D003450 1.0e-06 57.8 148 35.1
Medtr5g022000 Medicago truncatula HOM05D002880 ORTHO05D003450 1.0e-06 57.8 148 35.8
Psat2g154720 Pisum sativum HOM05D002880 ORTHO05D003450 1.0e-06 57.8 148 35.8
GSVIVG01018783001 Vitis vinifera HOM05D002880 ORTHO05D003450 1.0e-06 57.8 148 35.1
Ciclev10024677m.g Citrus clementina HOM05D002880 ORTHO05D003450 1.3e-06 57.4 148 34.5
ECA238G3174 Erigeron canadensis HOM05D002880 ORTHO05D003450 1.3e-06 57.4 153 34.6
Lsat_1_v5_gn_2_75940 Lactuca sativa HOM05D002880 ORTHO05D003450 1.3e-06 57.4 153 34.6
Lj2g0011330 Lotus japonicus HOM05D002880 ORTHO05D003450 1.3e-06 57.4 148 35.8
Lalb_Chr16g0377511 Lupinus albus HOM05D002880 ORTHO05D003450 1.3e-06 57.4 132 37.1
QL06p032741 Quercus lobata HOM05D002880 ORTHO05D003450 1.3e-06 57.4 147 34.0
Thecc.01G019100 Theobroma cacao HOM05D002880 ORTHO05D003450 1.3e-06 57.4 132 37.9
Glyma.01G166400 Glycine max HOM05D002880 ORTHO05D003450 1.7e-06 57.0 132 37.1
Manes.01G145600 Manihot esculenta HOM05D002880 ORTHO05D003450 1.7e-06 57.0 148 35.1
Lj2C468G7 Lonicera japonica HOM05D002880 ORTHO05D003450 2.3e-06 56.6 148 34.5
arahy.Tifrunner.gnm1.ann1.E76U4D Arachis hypogaea HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
arahy.Tifrunner.gnm1.ann1.FN5NT6 Arachis hypogaea HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
Cfa006971 Carpinus fangiana HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
Ca_25825_v3 Cicer arietinum L. HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
FvH4_1g11860 Fragaria vesca HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
FAN19G0100 Fragaria x ananassa HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
FAN23G1788 Fragaria x ananassa HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
FAN26G2624 Fragaria x ananassa HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
FAN28G1007 Fragaria x ananassa HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
Phvul.002G108900 Phaseolus vulgaris HOM05D002880 ORTHO05D003450 3.0e-06 56.2 132 37.1
PGR119G1290 Punica granatum HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
RcHm_v2.0_Chr2g0099461 Rosa chinensis HOM05D002880 ORTHO05D003450 3.0e-06 56.2 148 35.1
Actinidia17445 Actinidia chinensis HOM05D002880 ORTHO05D003450 3.9e-06 55.8 148 35.1
Cc07_g10710 Coffea canephora HOM05D002880 ORTHO05D003450 3.9e-06 55.8 132 35.6
COL.COLO4_21911 Corchorus olitorius HOM05D002880 ORTHO05D003450 3.9e-06 55.8 132 37.1
CiPaw.07G058400 Carya illinoinensis HOM05D002880 ORTHO05D003450 5.1e-06 55.5 131 34.4
Gohir.A02G170600 Gossypium hirsutum HOM05D002880 ORTHO05D003450 5.1e-06 55.5 132 36.4
Gohir.A11G175500 Gossypium hirsutum HOM05D002880 ORTHO05D003450 5.1e-06 55.5 148 35.1
Gohir.D11G183100 Gossypium hirsutum HOM05D002880 ORTHO05D003450 5.1e-06 55.5 148 35.1
Gorai.003G009700 Gossypium raimondii HOM05D002880 ORTHO05D003450 5.1e-06 55.5 132 36.4
Gorai.007G195100 Gossypium raimondii HOM05D002880 ORTHO05D003450 5.1e-06 55.5 148 35.1
TPR.G18181 Trifolium pratense HOM05D002880 ORTHO05D003450 5.1e-06 55.5 148 35.1
CANSAT01G1381 Cannabis sativa HOM05D002880 ORTHO05D003450 6.6e-06 55.1 132 34.8
Dinv40086 Davidia involucrata HOM05D002880 ORTHO05D003450 6.6e-06 55.1 131 34.4
Eucgr.I02351 Eucalyptus grandis HOM05D002880 ORTHO05D003450 6.6e-06 55.1 148 34.5
MBI14_g08214_MAGBIO Magnolia biondii HOM05D002880 ORTHO05D003450 6.6e-06 55.1 132 35.6
Atru.chr1.3786 Acer truncatum HOM05D002880 ORTHO05D003450 8.7e-06 54.7 148 33.8
Glyma.11G077000 Glycine max HOM05D002880 ORTHO05D003450 8.7e-06 54.7 132 36.4
Sed0027366 Sechium edule HOM05D002880 ORTHO05D003450 8.7e-06 54.7 132 35.6


User provided reference genes

Program Settings