Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000354 Vanilla planifolia HOM05D000094 ORTHO05D017818 1.9e-123 447.2 507 100.0
HPP92_000421 Vanilla planifolia HOM05D000094 ORTHO05D017818 3.3e-35 154.1 77 98.7
TAR362G0036 Trochodendron aralioides HOM05D000094 ORTHO05D002388 2.3e-20 104.8 101 51.5
Dinv22707 Davidia involucrata HOM05D000094 ORTHO05D002388 5.6e-19 100.1 108 49.1
Dinv44210 Davidia involucrata HOM05D000094 ORTHO05D017818 5.6e-19 100.1 99 53.5
Zm00001eb143420 Zea mays HOM05D000094 ORTHO05D002388 2.1e-18 98.2 103 49.5
Rhsim02G0071600 Rhododendron simsii HOM05D000094 ORTHO05D002388 1.1e-17 95.9 104 48.1
Nn1g09888 Nelumbo nucifera HOM05D000094 ORTHO05D002388 2.4e-17 94.7 97 47.4
Lj3C358T0 Lonicera japonica HOM05D000094 ORTHO05D002388 4.0e-17 94.0 104 43.3
Os01g0917500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D002388 6.9e-17 93.2 64 68.8
Sc25g0005630 Simmondsia chinensis HOM05D000094 ORTHO05D002388 2.0e-16 91.7 99 46.5
Actinidia26044 Actinidia chinensis HOM05D000094 ORTHO05D002388 3.4e-16 90.9 102 51.0
DCAR_023799 Daucus carota HOM05D000094 ORTHO05D002388 3.4e-16 90.9 105 45.7
Hma1.2p1_1286F.1_g273120 Hydrangea macrophylla HOM05D000094 ORTHO05D002388 3.4e-16 90.9 104 47.1
HanXRQChr14g0436271 Helianthus annuus HOM05D000094 ORTHO05D020417 4.5e-16 90.5 105 43.8
HanXRQChr10g0293931 Helianthus annuus HOM05D000094 ORTHO05D002388 5.8e-16 90.1 104 42.3
Actinidia39097 Actinidia chinensis HOM05D000094 ORTHO05D002388 2.2e-15 88.2 102 49.0
CSS0018977 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 2.2e-15 88.2 100 50.0
CSS0020762 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 2.2e-15 88.2 100 50.0
Nitab4.5_0006213g0030 Nicotiana tabacum HOM05D000094 ORTHO05D002388 4.9e-15 87.0 112 41.1
HanXRQChr10g0293951 Helianthus annuus HOM05D000094 ORTHO05D020417 6.4e-15 86.7 87 47.1
Lj3P376T13 Lonicera japonica HOM05D000094 ORTHO05D020417 6.4e-15 86.7 84 50.0
Nitab4.5_0002313g0050 Nicotiana tabacum HOM05D000094 ORTHO05D002388 6.4e-15 86.7 112 41.1
Aqoxy2G04065 Aquilegia oxysepala HOM05D000094 ORTHO05D002388 8.4e-15 86.3 90 51.1
Solyc09g098420.3 Solanum lycopersicum HOM05D000094 ORTHO05D002388 1.1e-14 85.9 102 45.1
Lj3P376T33 Lonicera japonica HOM05D000094 ORTHO05D002388 1.9e-14 85.1 84 48.8
PSO017G1116 Papaver somniferum HOM05D000094 ORTHO05D002388 2.4e-14 84.7 104 44.2
PSO675G4842 Papaver somniferum HOM05D000094 ORTHO05D002388 2.4e-14 84.7 104 44.2
Sopen09g036350 Solanum pennellii HOM05D000094 ORTHO05D002388 2.4e-14 84.7 102 44.1
CAN.G710.52 Capsicum annuum HOM05D000094 ORTHO05D002388 3.2e-14 84.3 101 45.5
EL10Ac3g07393 Beta vulgaris HOM05D000094 ORTHO05D002388 5.5e-14 83.6 104 41.3
AUR62033214 Chenopodium quinoa HOM05D000094 ORTHO05D002388 5.5e-14 83.6 100 44.0
Cc03_g10840 Coffea canephora HOM05D000094 ORTHO05D002388 7.1e-14 83.2 101 41.6
CDE09G1099 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 9.3e-14 82.8 62 61.3
Oeu050347.1 Olea europaea HOM05D000094 ORTHO05D002388 4.6e-13 80.5 106 47.2
Migut.G01136 Erythranthe guttata HOM05D000094 ORTHO05D002388 6.0e-13 80.1 114 43.0
Lsat_1_v5_gn_2_48221 Lactuca sativa HOM05D000094 ORTHO05D002388 7.9e-13 79.7 100 42.0
PGSC0003DMG400021622 Solanum tuberosum HOM05D000094 ORTHO05D002388 7.9e-13 79.7 80 48.8
HanXRQChr15g0470271 Helianthus annuus HOM05D000094 ORTHO05D020417 1.3e-12 79.0 81 48.1
AUR62021297 Chenopodium quinoa HOM05D000094 ORTHO05D002388 2.3e-12 78.2 100 42.0
Peaxi162Scf00286g00028 Petunia axillaris HOM05D000094 ORTHO05D002388 5.1e-12 77.0 101 40.6
SGA_v2.0_scaffold17G08040 Striga asiatica HOM05D000094 ORTHO05D002388 5.1e-12 77.0 110 43.6
AUR62018484 Chenopodium quinoa HOM05D000094 ORTHO05D002388 1.9e-11 75.1 99 39.4
ECA238G0840 Erigeron canadensis HOM05D000094 ORTHO05D002388 4.3e-11 73.9 97 38.1
AUR62040316 Chenopodium quinoa HOM05D000094 ORTHO05D020417 5.6e-11 73.6 96 41.7
Ah.04g149870 Amaranthus hybridus HOM05D000094 ORTHO05D002388 7.4e-11 73.2 100 41.0
GSVIVG01031661001 Vitis vinifera HOM05D000094 ORTHO05D002388 1.6e-10 72.0 92 40.2
ATR1147G009 Amborella trichopoda HOM05D000094 ORTHO05D002388 2.1e-10 71.6 98 37.8
AUR62020939 Chenopodium quinoa HOM05D000094 ORTHO05D002388 2.1e-10 71.6 102 36.3
Cpa.g.sc85.86 Carica papaya HOM05D000570 ORTHO05D005344 8.1e-10 69.7 92 40.2
BcaB03g13682 Brassica carinata HOM05D000029 ORTHO05D006280 6.9e-09 66.6 107 39.3
Ciclev10004265m.g Citrus clementina HOM05D000094 ORTHO05D002388 1.5e-08 65.5 59 42.4
SEGI_06180 Sequoiadendron giganteum HOM05D000094 ORTHO05D002388 3.4e-08 64.3 53 54.7
Gorai.003G034200 Gossypium raimondii HOM05D000029 ORTHO05D001395 1.3e-07 62.4 87 40.2
HanXRQChr04g0109121 Helianthus annuus HOM05D000033 ORTHO05D007915 8.4e-07 59.7 90 41.1
Solyc08g016270.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 8.4e-07 59.7 101 36.6
BolC5t32512H Brassica oleracea HOM05D000029 ORTHO05D006280 1.4e-06 58.9 107 34.6
CSS0038036 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.4e-06 58.9 84 39.3
Gohir.D03G032600 Gossypium hirsutum HOM05D000029 ORTHO05D001395 1.4e-06 58.9 87 39.1
BcaB01g00056 Brassica carinata HOM05D000053 ORTHO05D000035 1.9e-06 58.5 89 40.4
BcaC05g27773 Brassica carinata HOM05D000029 ORTHO05D006280 1.9e-06 58.5 107 34.6
C05p37690 Brassica napus HOM05D000029 ORTHO05D006280 1.9e-06 58.5 107 34.6
SEGI_36696 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 1.9e-06 58.5 101 31.7
THA.LOC109115978 Tarenaya hassleriana HOM05D000029 ORTHO05D006280 1.9e-06 58.5 106 36.8
Gohir.A02G147800 Gossypium hirsutum HOM05D000029 ORTHO05D001395 2.5e-06 58.2 87 37.9
A05p24050 Brassica napus HOM05D000029 ORTHO05D006280 3.2e-06 57.8 108 34.3
BraA05t21284Z Brassica rapa HOM05D000029 ORTHO05D006280 3.2e-06 57.8 108 34.3
Phvul.002G177200 Phaseolus vulgaris HOM05D000106 ORTHO05D001887 3.2e-06 57.8 99 36.4
Phvul.006G198200 Phaseolus vulgaris HOM05D000029 ORTHO05D002500 3.2e-06 57.8 100 35.0
Gohir.A08G020024 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.2e-06 57.4 102 34.3
MBI04_g42204_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D006280 4.2e-06 57.4 102 35.3
A09p48840 Brassica napus HOM05D000053 ORTHO05D000035 5.5e-06 57.0 90 38.9
BraA09t40339Z Brassica rapa HOM05D000053 ORTHO05D000035 5.5e-06 57.0 90 38.9
MELO3C020998.2 Cucumis melo HOM05D000033 ORTHO05D007915 5.5e-06 57.0 90 36.7
Gohir.D01G042166 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.5e-06 57.0 94 40.4
HanXRQChr05g0162501 Helianthus annuus HOM05D000029 ORTHO05D006280 5.5e-06 57.0 103 35.0
HPP92_021666 Vanilla planifolia HOM05D000029 ORTHO05D001395 5.5e-06 57.0 78 39.7
Zm00001eb040920 Zea mays HOM05D000029 ORTHO05D002586 5.5e-06 57.0 90 33.3
CAN.G222.20 Capsicum annuum HOM05D000311 ORTHO05D000183 7.1e-06 56.6 82 39.0
CARHR205870 Cardamine hirsuta HOM05D000094 ORTHO05D002388 7.1e-06 56.6 58 43.1
Gorai.007G340300 Gossypium raimondii HOM05D000071 ORTHO05D000029 7.1e-06 56.6 83 43.4
Potri.005G198000 Populus trichocarpa HOM05D000029 ORTHO05D006280 7.1e-06 56.6 102 33.3
GSVIVG01025718001 Vitis vinifera HOM05D000094 ORTHO05D017818 7.1e-06 56.6 48 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1232 Anthoceros agrestis HOM05D000106 ORTHO05D001887 9.3e-06 56.2 69 39.1
AL7G13590 Arabidopsis lyrata HOM05D000033 ORTHO05D002493 9.3e-06 56.2 92 35.9
MSTRG.22111 Avicennia marina HOM05D000029 ORTHO05D006280 9.3e-06 56.2 108 35.2
C08p31190 Brassica napus HOM05D000053 ORTHO05D000035 9.3e-06 56.2 90 38.9
FAN15G1224 Fragaria x ananassa HOM05D000029 ORTHO05D002500 9.3e-06 56.2 90 41.1
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.3e-06 56.2 90 41.1
FAN24G0403 Fragaria x ananassa HOM05D000029 ORTHO05D002500 9.3e-06 56.2 90 41.1
Lj7P386T31 Lonicera japonica HOM05D000029 ORTHO05D006280 9.3e-06 56.2 86 39.5
Potri.001G437800 Populus trichocarpa HOM05D000053 ORTHO05D000035 9.3e-06 56.2 92 42.4
Rhsim13G0042700 Rhododendron simsii HOM05D000033 ORTHO05D007915 9.3e-06 56.2 90 38.9
SEGI_06797 Sequoiadendron giganteum HOM05D000029 ORTHO05D006280 9.3e-06 56.2 109 28.4


User provided reference genes

Program Settings