Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.0e-153 543.9 307 100.0
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.3e-134 480.7 292 95.5
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.2e-129 466.8 306 89.2
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 3.3e-50 203.0 311 48.9
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 2.5e-45 186.8 309 46.3
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 6.7e-43 178.7 311 43.7
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 1.2e-42 177.9 302 44.4
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 4.4e-42 176.0 289 37.0
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 3.7e-41 172.9 323 44.3
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 4.8e-41 172.6 320 48.1
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 8.2e-41 171.8 335 40.6
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 8.2e-41 171.8 218 46.3
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.4e-40 171.0 313 43.8
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 5.3e-40 169.1 211 46.0
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 7.0e-40 168.7 297 43.4
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 1.6e-39 167.5 305 43.9
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.5e-39 166.4 343 40.2
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 5.9e-39 165.6 326 42.6
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 5.9e-39 165.6 335 43.3
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 7.7e-39 165.2 312 44.6
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 1.0e-38 164.9 328 41.5
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 1.0e-38 164.9 328 41.5
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.3e-38 164.5 334 40.4
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 1.7e-38 164.1 343 41.7
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.7e-38 164.1 245 43.7
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 1.7e-38 164.1 319 41.1
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 2.9e-38 163.3 352 40.1
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 3.8e-38 162.9 342 42.1
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 1.1e-37 161.4 313 43.8
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.5e-37 161.0 312 42.6
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 1.9e-37 160.6 338 42.0
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 2.5e-37 160.2 252 44.8
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 3.2e-37 159.8 343 41.7
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 3.2e-37 159.8 320 41.2
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 4.2e-37 159.5 337 41.5
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 4.2e-37 159.5 327 41.6
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 9.4e-37 158.3 322 43.5
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 9.4e-37 158.3 211 45.0
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 1.6e-36 157.5 347 38.9
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.6e-36 157.5 327 36.1
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 2.7e-36 156.8 331 39.9
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.7e-36 156.8 211 44.5
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 2.7e-36 156.8 318 34.6
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 3.6e-36 156.4 354 39.5
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 4.7e-36 156.0 354 39.5
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 8.0e-36 155.2 300 43.7
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 8.0e-36 155.2 324 42.9
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 8.0e-36 155.2 342 41.5
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.0e-35 154.8 323 38.4
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.4e-35 154.5 248 36.7
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 6.8e-35 152.1 211 41.7
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.5e-34 151.0 345 38.3
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.5e-34 151.0 355 31.8
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 3.4e-34 149.8 331 41.1
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 4.4e-34 149.4 356 37.6
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 4.4e-34 149.4 227 40.1
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 5.7e-34 149.1 213 40.4
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 7.5e-34 148.7 313 39.0
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 7.5e-34 148.7 319 39.8
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 9.8e-34 148.3 312 39.4
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 9.8e-34 148.3 327 36.1
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 1.7e-33 147.5 344 38.4
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 6.3e-33 145.6 301 39.2
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 6.3e-33 145.6 306 38.9
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 8.3e-33 145.2 219 38.8
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 8.3e-33 145.2 357 38.7
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 8.3e-33 145.2 214 42.5
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 1.1e-32 144.8 211 39.3
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.1e-32 144.8 211 39.3
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 1.4e-32 144.4 328 39.0
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 7.0e-32 142.1 218 41.7
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 2.7e-31 140.2 116 62.1
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 4.5e-31 139.4 249 36.5
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 5.9e-31 139.0 322 32.3
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 5.9e-31 139.0 336 40.8
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 5.0e-30 136.0 233 38.6
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 8.5e-30 135.2 233 36.5
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.1e-29 134.8 357 35.6
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 7.2e-29 132.1 379 36.1
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 9.5e-29 131.7 115 55.7
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 1.6e-28 131.0 245 37.6
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 2.1e-28 130.6 246 35.8
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 4.7e-28 129.4 337 37.1
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.0e-28 128.6 223 39.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 1.0e-27 128.3 282 41.1
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.4e-27 127.9 223 39.0
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 3.0e-27 126.7 335 37.0
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 3.4e-26 123.2 117 52.1
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 3.7e-25 119.8 233 34.3
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.4e-24 117.9 118 53.4
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 3.5e-23 113.2 350 35.1
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 3.3e-21 106.7 128 42.2
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 4.3e-21 106.3 115 47.0
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 4.3e-21 106.3 281 39.5
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 1.2e-20 104.8 241 32.8
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 3.9e-14 83.2 130 33.8
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.3e-13 79.7 53 73.6
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 5.6e-13 79.3 285 35.4
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 4.4e-10 69.7 181 32.0
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 3.7e-09 66.6 128 35.9
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.3e-09 65.5 53 64.2
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.0e-06 58.5 71 47.9


User provided reference genes

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