Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000244 Vanilla planifolia HOM05D005327 ORTHO05D006655 9.7e-92 340.1 171 100.0
Migut.J00826 Erythranthe guttata HOM05D005327 ORTHO05D006655 5.2e-53 211.5 158 67.7
TAR383G0919 Trochodendron aralioides HOM05D005327 ORTHO05D006655 3.7e-51 205.3 162 63.6
HPP92_000193 Vanilla planifolia HOM05D005327 ORTHO05D006655 6.4e-51 204.5 157 72.6
Aqoxy7G02706 Aquilegia oxysepala HOM05D005327 ORTHO05D006655 2.4e-50 202.6 158 65.2
SGA_v2.0_scaffold31G12725 Striga asiatica HOM05D005327 ORTHO05D006655 1.2e-49 200.3 158 62.7
Ciclev10008332m.g Citrus clementina HOM05D005327 ORTHO05D006655 2.7e-49 199.1 162 63.0
Prupe.1G067200 Prunus persica HOM05D005327 ORTHO05D006655 2.7e-49 199.1 158 64.6
MSTRG.19391 Avicennia marina HOM05D005327 ORTHO05D006655 3.5e-49 198.7 163 63.8
HanXRQChr03g0067401 Helianthus annuus HOM05D005327 ORTHO05D006655 4.6e-49 198.4 162 62.3
PSO063G6174 Papaver somniferum HOM05D005327 ORTHO05D006655 6.0e-49 198.0 162 64.2
PSO170G4496 Papaver somniferum HOM05D005327 ORTHO05D006655 6.0e-49 198.0 162 63.6
SalBow6G3212 Salvia bowleyana HOM05D005327 ORTHO05D006655 6.0e-49 198.0 173 59.5
TWI34G0155 Tripterygium wilfordii HOM05D005327 ORTHO05D006655 7.8e-49 197.6 162 61.7
Gohir.D05G002100 Gossypium hirsutum HOM05D005327 ORTHO05D006655 1.7e-48 196.4 162 61.7
Dinv02614 Davidia involucrata HOM05D005327 ORTHO05D006655 3.0e-48 195.7 162 63.6
Actinidia02486 Actinidia chinensis HOM05D005327 ORTHO05D006655 3.9e-48 195.3 158 65.2
DCAR_019096 Daucus carota HOM05D005327 ORTHO05D006655 8.6e-48 194.1 164 61.0
Gorai.009G002000 Gossypium raimondii HOM05D005327 ORTHO05D006655 8.6e-48 194.1 162 61.1
Hma1.2p1_0022F.1_g014820 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 8.6e-48 194.1 163 64.4
ClCG06G013980 Citrullus lanatus HOM05D005327 ORTHO05D006655 1.1e-47 193.7 164 62.2
Duzib170G0396 Durio zibethinus HOM05D005327 ORTHO05D006655 1.1e-47 193.7 158 62.7
CANSAT01G0668 Cannabis sativa HOM05D005327 ORTHO05D006655 1.9e-47 193.0 161 60.2
GSVIVG01035172001 Vitis vinifera HOM05D005327 ORTHO05D006655 1.9e-47 193.0 161 60.9
AUR62021329 Chenopodium quinoa HOM05D005327 ORTHO05D006655 2.5e-47 192.6 158 63.3
CsaV3_1G032190 Cucumis sativus L. HOM05D005327 ORTHO05D006655 3.3e-47 192.2 164 62.8
MELO3C017398.2 Cucumis melo HOM05D005327 ORTHO05D006655 4.3e-47 191.8 164 62.2
Thecc.09G189900 Theobroma cacao HOM05D005327 ORTHO05D006655 4.3e-47 191.8 162 62.3
CiPaw.15G154300 Carya illinoinensis HOM05D005327 ORTHO05D006655 5.6e-47 191.4 161 60.9
Aa31LG3G3560 Aethionema arabicum HOM05D005327 ORTHO05D006655 7.3e-47 191.0 156 65.4
Lj4g0024487 Lotus japonicus HOM05D005327 ORTHO05D006655 7.3e-47 191.0 161 60.9
MD13G1235800 Malus domestica HOM05D005327 ORTHO05D006655 9.6e-47 190.7 158 62.0
Sed0022639 Sechium edule HOM05D005327 ORTHO05D006655 9.6e-47 190.7 163 62.6
Manes.15G099200 Manihot esculenta HOM05D005327 ORTHO05D006655 1.2e-46 190.3 157 61.8
Medtr8g101540 Medicago truncatula HOM05D005327 ORTHO05D006655 2.1e-46 189.5 162 60.5
AUR62033244 Chenopodium quinoa HOM05D005327 ORTHO05D006655 2.8e-46 189.1 158 63.3
Haze_19034 Corylus avellana HOM05D005327 ORTHO05D006655 2.8e-46 189.1 178 57.9
Atru.chr7.986 Acer truncatum HOM05D005327 ORTHO05D006655 3.6e-46 188.7 158 61.4
Cpa.g.sc115.46 Carica papaya HOM05D005327 ORTHO05D006655 3.6e-46 188.7 162 59.9
Hma1.2p1_0022F.1_g014810 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 3.6e-46 188.7 166 63.3
Eucgr.C02197 Eucalyptus grandis HOM05D005327 ORTHO05D006655 4.7e-46 188.3 162 59.9
PGR044G1838 Punica granatum HOM05D005327 ORTHO05D006655 6.2e-46 188.0 162 60.5
unitig_77.g31482 Utricularia gibba HOM05D005327 ORTHO05D006655 6.2e-46 188.0 154 62.3
Gohir.A05G001832 Gossypium hirsutum HOM05D005327 ORTHO05D006655 8.1e-46 187.6 158 60.1
THA.LOC104826954 Tarenaya hassleriana HOM05D005327 ORTHO05D006655 1.1e-45 187.2 158 62.7
FvH4_4g06430 Fragaria vesca HOM05D005327 ORTHO05D006655 1.4e-45 186.8 158 60.1
Glyma.05G222000 Glycine max HOM05D005327 ORTHO05D006655 1.4e-45 186.8 158 60.8
Ah.11g044360 Amaranthus hybridus HOM05D005327 ORTHO05D006655 1.8e-45 186.4 160 60.6
Glyma.08G028600 Glycine max HOM05D005327 ORTHO05D006655 1.8e-45 186.4 158 60.8
Rhsim01G0113000 Rhododendron simsii HOM05D005327 ORTHO05D006655 1.8e-45 186.4 162 59.9
BraA05t22640Z Brassica rapa HOM05D005327 ORTHO05D006655 2.4e-45 186.0 155 63.2
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 3.1e-45 185.7 155 63.2
FAN07G1666 Fragaria x ananassa HOM05D005327 ORTHO05D006655 3.1e-45 185.7 158 60.1
Nitab4.5_0004947g0030 Nicotiana tabacum HOM05D005327 ORTHO05D006655 3.1e-45 185.7 168 58.9
Psat7g020320 Pisum sativum HOM05D005327 ORTHO05D006655 3.1e-45 185.7 157 63.7
Potri.006G070500 Populus trichocarpa HOM05D005327 ORTHO05D006655 3.1e-45 185.7 160 60.6
Ca_17407_v3 Cicer arietinum L. HOM05D005327 ORTHO05D006655 4.0e-45 185.3 162 61.7
FAN12G0339 Fragaria x ananassa HOM05D005327 ORTHO05D006655 4.0e-45 185.3 158 60.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 4.0e-45 185.3 164 60.4
MD16G1240500 Malus domestica HOM05D005327 ORTHO05D006655 5.2e-45 184.9 158 61.4
Nitab4.5_0000053g0140 Nicotiana tabacum HOM05D005327 ORTHO05D006655 8.9e-45 184.1 168 58.3
FAN22G1263 Fragaria x ananassa HOM05D005327 ORTHO05D006655 1.2e-44 183.7 158 59.5
Oeu011821.1 Olea europaea HOM05D005327 ORTHO05D006655 1.2e-44 183.7 140 65.7
RcHm_v2.0_Chr4g0398191 Rosa chinensis HOM05D005327 ORTHO05D006655 1.2e-44 183.7 158 58.9
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 2.0e-44 183.0 155 62.6
Lalb_Chr09g0331881 Lupinus albus HOM05D005327 ORTHO05D006655 2.0e-44 183.0 162 58.0
AL3G22170 Arabidopsis lyrata HOM05D005327 ORTHO05D006655 2.6e-44 182.6 155 61.9
Thhalv10020814m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 2.6e-44 182.6 155 61.9
Lalb_Chr05g0223671 Lupinus albus HOM05D005327 ORTHO05D006655 2.6e-44 182.6 161 59.0
Carub.0003s0993 Capsella rubella HOM05D005327 ORTHO05D006655 4.4e-44 181.8 155 61.3
Lsat_1_v5_gn_7_59540 Lactuca sativa HOM05D005327 ORTHO05D006655 4.4e-44 181.8 160 61.9
AT3G10700 Arabidopsis thaliana HOM05D005327 ORTHO05D006655 5.8e-44 181.4 155 62.6
vmacro20791 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 9.9e-44 180.6 152 61.2
Sp3g09020 Schrenkiella parvula HOM05D005327 ORTHO05D006655 2.9e-43 179.1 155 61.9
Phvul.002G303800 Phaseolus vulgaris HOM05D005327 ORTHO05D006655 4.9e-43 178.3 158 56.3
Nn8g41033 Nelumbo nucifera HOM05D005327 ORTHO05D006655 6.4e-43 177.9 163 55.8
ATR0626G140 Amborella trichopoda HOM05D005327 ORTHO05D006655 1.9e-42 176.4 158 58.9
Sc14g0001350 Simmondsia chinensis HOM05D005327 ORTHO05D006655 7.1e-42 174.5 144 61.8
unitig_749.g14193 Utricularia gibba HOM05D005327 ORTHO05D006655 7.1e-42 174.5 149 62.4
Sabra06G0052400 Salix brachista HOM05D005327 ORTHO05D006655 3.5e-41 172.2 182 52.7
Hund09044 Selenicereus undatus HOM05D005327 ORTHO05D006655 6.0e-41 171.4 154 59.7
ECA240G0405 Erigeron canadensis HOM05D005327 ORTHO05D006655 7.8e-41 171.0 137 63.5
CARHR085280 Cardamine hirsuta HOM05D005327 ORTHO05D006655 2.3e-40 169.5 138 65.9
vmacro20765 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 3.9e-40 168.7 182 52.2
Os04g0608100 Oryza sativa ssp. japonica HOM05D005327 ORTHO05D006655 8.7e-40 167.5 156 57.1
Solyc07g014640.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 1.1e-39 167.2 131 66.4
Zm00001eb071360 Zea mays HOM05D005327 ORTHO05D006655 5.6e-39 164.9 157 54.1
COL.COLO4_23452 Corchorus olitorius HOM05D005327 ORTHO05D006655 8.1e-38 161.0 176 52.8
arahy.Tifrunner.gnm1.ann1.BX5CIC Arachis hypogaea HOM05D005327 ORTHO05D006655 9.0e-37 157.5 156 52.6
SEGI_37801 Sequoiadendron giganteum HOM05D005327 ORTHO05D006655 9.0e-37 157.5 158 49.4
arahy.Tifrunner.gnm1.ann1.X8NFG9 Arachis hypogaea HOM05D005327 ORTHO05D006655 1.5e-36 156.8 156 51.9
EL10Ac8g18314 Beta vulgaris HOM05D005327 ORTHO05D006655 3.8e-35 152.1 240 42.5
Pp3c23_15130 Physcomitrium patens HOM05D005327 ORTHO05D006655 6.0e-33 144.8 159 49.7
CDE06G0639 Ceratophyllum demersum HOM05D005327 ORTHO05D006655 3.9e-32 142.1 114 62.3
Mapoly0128s0021 Marchantia polymorpha HOM05D005327 ORTHO05D006655 1.6e-30 136.7 153 51.0
Lj5A713T18 Lonicera japonica HOM05D005327 ORTHO05D006655 2.8e-30 136.0 110 66.4
Peaxi162Scf00889g00111 Petunia axillaris HOM05D005327 ORTHO05D006655 1.1e-29 134.0 116 61.2
SMO356G0298 Selaginella moellendorffii HOM05D005327 ORTHO05D006655 7.6e-28 127.9 158 41.1
Sopen07g005500 Solanum pennellii HOM05D005327 ORTHO05D006655 4.6e-25 118.6 107 59.8
CBR_g4778 Chara braunii HOM05D005327 ORTHO05D000002 3.9e-24 115.5 151 43.0
VMungo0251G1981 Vigna mungo HOM05D005327 ORTHO05D006655 1.1e-23 114.0 87 59.8
QL11p009810 Quercus lobata HOM05D005327 ORTHO05D006655 2.9e-19 99.4 73 64.4
Sed0024331 Sechium edule HOM05D005327 ORTHO05D006655 2.9e-19 99.4 119 49.6
TPR.G25461 Trifolium pratense HOM05D005327 ORTHO05D006655 4.9e-19 98.6 87 65.5
TPR.G2647 Trifolium pratense HOM05D005327 ORTHO05D006655 1.6e-17 93.6 69 65.2
BolC5t34395H Brassica oleracea HOM05D005327 ORTHO05D006655 3.0e-16 89.4 87 59.8
Sabra18G0112000 Salix brachista HOM05D005327 ORTHO05D006655 4.8e-14 82.0 66 56.1
PGR044G0615 Punica granatum HOM05D005327 ORTHO05D006655 1.8e-13 80.1 108 43.5
MCO11G047 Micromonas commoda HOM05D005327 ORTHO05D006655 2.4e-13 79.7 164 32.3
AagrBONN_evm.TU.Sc2ySwM_344.300 Anthoceros agrestis HOM05D005327 ORTHO05D006655 4.5e-12 75.5 132 36.4
CAN.G33.6 Capsicum annuum HOM05D005327 ORTHO05D006655 1.2e-09 67.4 44 59.1
SHI03098 Sapria himalayana HOM05D005327 ORTHO05D006655 6.1e-09 65.1 45 60.0
arahy.Tifrunner.gnm1.ann1.TSV22Z Arachis hypogaea HOM05D026511 ORTHO05D038857 2.2e-06 56.6 45 53.3


User provided reference genes

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