Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.9e-110 402.5 208 100.0
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.4e-108 396.4 208 98.6
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 1.7e-50 203.4 169 62.1
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 1.5e-49 200.3 208 54.8
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 4.3e-49 198.7 198 56.6
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.6e-48 196.8 169 61.5
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 6.2e-48 194.9 176 58.0
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 8.0e-48 194.5 169 57.4
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 1.8e-47 193.4 169 56.8
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 2.3e-47 193.0 177 54.2
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 3.1e-47 192.6 176 57.4
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 9.8e-46 187.6 173 56.1
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.3e-45 187.2 184 53.3
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.3e-45 187.2 166 56.6
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.7e-45 186.8 173 54.9
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 2.2e-45 186.4 158 58.2
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 2.2e-45 186.4 144 62.5
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 2.2e-45 186.4 166 56.0
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.2e-45 186.4 176 56.2
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 2.9e-45 186.0 152 60.5
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 2.9e-45 186.0 179 54.7
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 2.9e-45 186.0 179 54.7
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 3.7e-45 185.7 167 58.1
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 3.7e-45 185.7 151 62.9
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 8.3e-45 184.5 153 58.8
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 8.3e-45 184.5 154 61.7
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 1.1e-44 184.1 179 54.2
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 5.4e-44 181.8 150 60.0
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 5.4e-44 181.8 144 61.1
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 5.4e-44 181.8 152 59.2
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 7.0e-44 181.4 178 53.9
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 9.2e-44 181.0 148 60.1
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.6e-43 180.3 182 54.9
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 2.1e-43 179.9 158 57.6
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 2.1e-43 179.9 172 51.2
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 2.7e-43 179.5 209 48.3
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 2.7e-43 179.5 148 59.5
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 2.7e-43 179.5 175 56.0
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 2.7e-43 179.5 157 58.0
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 2.7e-43 179.5 167 55.1
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 6.0e-43 178.3 152 58.6
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 7.8e-43 177.9 143 60.1
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 1.0e-42 177.6 190 50.5
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.3e-42 177.2 147 57.8
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 1.3e-42 177.2 203 45.8
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 1.3e-42 177.2 150 58.0
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 2.3e-42 176.4 186 52.2
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 2.3e-42 176.4 152 57.2
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 2.3e-42 176.4 148 58.8
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 3.0e-42 176.0 164 56.1
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 3.0e-42 176.0 138 62.3
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 3.0e-42 176.0 145 62.8
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 3.9e-42 175.6 175 52.0
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 5.1e-42 175.3 137 59.9
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 5.1e-42 175.3 152 57.2
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 6.6e-42 174.9 148 58.1
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 8.6e-42 174.5 151 60.9
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.1e-41 174.1 189 47.6
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 1.1e-41 174.1 151 60.9
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 1.5e-41 173.7 144 61.1
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 1.5e-41 173.7 139 61.9
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 1.5e-41 173.7 142 60.6
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 4.3e-41 172.2 141 56.7
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 4.3e-41 172.2 141 56.7
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 7.3e-41 171.4 189 50.8
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 9.5e-41 171.0 141 56.0
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.2e-40 170.6 141 63.1
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 1.6e-40 170.2 191 49.7
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 1.6e-40 170.2 152 55.9
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 1.6e-40 170.2 161 57.8
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 1.6e-40 170.2 181 49.7
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 2.1e-40 169.9 151 58.9
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 2.8e-40 169.5 165 50.9
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 6.2e-40 168.3 170 51.8
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.1e-40 167.9 141 55.3
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.1e-39 167.5 147 57.8
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 1.4e-39 167.2 184 51.1
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 2.3e-39 166.4 151 57.6
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 3.1e-39 166.0 187 50.8
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 4.0e-39 165.6 168 53.0
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 6.8e-39 164.9 176 50.6
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 2.0e-38 163.3 152 55.3
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 7.5e-38 161.4 182 47.8
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 9.9e-38 161.0 178 47.2
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 2.2e-37 159.8 169 49.1
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 2.9e-37 159.5 163 50.9
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 8.3e-37 157.9 141 53.9
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 8.3e-37 157.9 141 53.9
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 7.1e-36 154.8 148 53.4
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 2.1e-35 153.3 152 52.0
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-34 150.6 181 43.1
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.1e-31 139.4 117 62.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 8.4e-29 131.3 144 50.7
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 8.4e-29 131.3 103 62.1
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 5.4e-28 128.6 160 46.9
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.2e-27 127.5 200 39.5
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 4.6e-27 125.6 110 57.3
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 3.0e-26 122.9 144 45.1
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 5.6e-25 118.6 144 44.4
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 9.6e-25 117.9 153 45.8
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 1.4e-23 114.0 134 43.3
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 6.9e-23 111.7 118 51.7
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 9.9e-22 107.8 134 46.3
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 1.7e-21 107.1 126 46.0
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 2.2e-21 106.7 109 51.4
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 2.4e-20 103.2 98 54.1
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 3.5e-19 99.4 101 49.5
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 7.8e-19 98.2 103 52.4
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 7.8e-19 98.2 87 56.3
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 1.3e-18 97.4 102 51.0
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.3e-18 97.4 117 47.9
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.3e-18 97.4 117 47.9
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 2.3e-18 96.7 109 46.8
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 3.9e-18 95.9 99 52.5
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 1.9e-17 93.6 83 59.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.3e-16 90.9 72 59.7
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 2.0e-14 83.6 106 42.5
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 5.8e-14 82.0 94 47.9
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 4.9e-13 79.0 87 50.6
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.2e-12 75.9 61 60.7
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 6.0e-11 72.0 54 61.1
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 8.7e-10 68.2 61 63.9
vmacro12152 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.3e-08 64.3 45 60.0
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 4.5e-06 55.8 68 45.6
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 4.5e-06 55.8 43 60.5
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 7.6e-06 55.1 101 38.6
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 7.6e-06 55.1 64 48.4
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 7.6e-06 55.1 101 38.6


User provided reference genes

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