Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.5e-110 402.9 208 100.0
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.8e-108 396.0 208 98.6
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 1.0e-50 204.1 169 62.1
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 1.1e-49 200.7 198 58.1
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 1.5e-49 200.3 204 55.4
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 5.6e-49 198.4 169 62.1
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 1.2e-48 197.2 176 58.5
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 6.2e-48 194.9 169 57.4
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.1e-47 194.1 177 54.2
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 1.4e-47 193.7 197 52.3
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 5.2e-47 191.8 176 57.4
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 3.4e-46 189.1 184 53.8
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 5.8e-46 188.3 175 55.4
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 5.8e-46 188.3 204 51.5
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 5.8e-46 188.3 176 56.8
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 7.5e-46 188.0 179 55.3
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 7.5e-46 188.0 179 55.3
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 9.8e-46 187.6 172 55.8
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 9.8e-46 187.6 175 54.9
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.3e-45 187.2 143 62.9
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 1.7e-45 186.8 152 60.5
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 2.2e-45 186.4 151 62.9
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 2.2e-45 186.4 153 59.5
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 2.9e-45 186.0 179 54.7
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 4.9e-45 185.3 167 58.1
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 4.9e-45 185.3 154 61.7
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 8.3e-45 184.5 158 57.6
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 1.4e-44 183.7 150 60.7
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 1.9e-44 183.3 178 54.5
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 3.2e-44 182.6 143 61.5
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 4.1e-44 182.2 177 50.8
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 7.0e-44 181.4 185 51.4
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 9.2e-44 181.0 209 48.8
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 9.2e-44 181.0 148 59.5
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 9.2e-44 181.0 175 56.6
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 1.2e-43 180.6 158 57.6
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.2e-43 180.6 166 59.0
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.6e-43 180.3 148 59.5
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 2.1e-43 179.9 152 58.6
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 2.7e-43 179.5 203 46.3
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 3.5e-43 179.1 148 59.5
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 3.5e-43 179.1 157 58.0
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 4.6e-43 178.7 190 50.5
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 4.6e-43 178.7 170 54.1
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 6.0e-43 178.3 138 63.0
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 7.8e-43 177.9 164 56.7
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 7.8e-43 177.9 186 52.7
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 7.8e-43 177.9 147 57.8
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 7.8e-43 177.9 150 58.0
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 1.3e-42 177.2 152 57.2
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.3e-42 177.2 137 60.6
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.7e-42 176.8 167 54.5
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 2.3e-42 176.4 148 58.1
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 2.3e-42 176.4 175 52.6
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 2.3e-42 176.4 145 62.8
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 3.0e-42 176.0 139 62.6
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 3.9e-42 175.6 144 61.8
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 5.1e-42 175.3 151 60.9
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 5.1e-42 175.3 142 61.3
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 6.6e-42 174.9 189 47.6
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 6.6e-42 174.9 151 60.9
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 6.6e-42 174.9 152 56.6
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.6e-42 174.5 141 57.4
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.6e-42 174.5 141 57.4
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.9e-41 173.3 141 56.7
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 3.3e-41 172.6 161 58.4
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 3.3e-41 172.6 181 50.3
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 3.3e-41 172.6 141 63.8
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 5.6e-41 171.8 151 59.6
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 7.3e-41 171.4 170 54.1
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 7.3e-41 171.4 165 51.5
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 9.5e-41 171.0 152 55.9
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 2.8e-40 169.5 170 52.4
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 3.6e-40 169.1 158 55.7
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 3.6e-40 169.1 184 51.6
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 4.7e-40 168.7 141 55.3
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 4.7e-40 168.7 147 58.5
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 4.7e-40 168.7 187 48.7
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.1e-39 167.5 169 53.8
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 1.1e-39 167.5 151 58.3
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.3e-39 166.4 168 53.0
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 8.9e-39 164.5 152 55.9
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 7.5e-38 161.4 177 47.5
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 1.3e-37 160.6 168 49.4
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 1.3e-37 160.6 162 51.2
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.7e-37 160.2 162 51.2
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 4.9e-37 158.7 140 54.3
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 4.9e-37 158.7 140 54.3
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 4.1e-36 155.6 152 52.6
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 9.2e-36 154.5 148 53.4
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-35 153.3 181 43.6
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 1.8e-31 140.2 117 62.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 4.9e-29 132.1 144 50.7
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.1e-28 131.0 103 62.1
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 1.9e-28 130.2 110 59.1
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 3.2e-28 129.4 160 46.9
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.2e-27 127.5 200 39.5
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 1.7e-26 123.6 144 45.1
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 3.3e-25 119.4 144 44.4
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 4.7e-24 115.5 134 44.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 6.2e-24 115.2 153 45.1
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 1.8e-23 113.6 118 52.5
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 7.6e-22 108.2 115 50.4
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 2.9e-21 106.3 126 46.0
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 3.8e-21 105.9 109 51.4
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 6.4e-21 105.1 98 55.1
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.6e-19 100.5 100 51.0
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-19 100.1 103 53.4
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 2.1e-19 100.1 87 57.5
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.7e-19 99.8 131 44.3
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.7e-19 99.8 131 44.3
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 3.5e-19 99.4 102 52.0
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.0e-18 97.8 99 53.5
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 5.1e-18 95.5 83 60.2
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 1.1e-17 94.4 109 45.9
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 4.3e-17 92.4 73 58.9
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 1.5e-14 84.0 83 54.2
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 2.6e-14 83.2 106 42.5
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.7e-13 80.5 87 51.7
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.2e-12 75.9 61 60.7
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 6.0e-11 72.0 54 61.1
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 2.3e-10 70.1 61 65.6
vmacro12152 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.3e-08 64.3 45 60.0
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-06 57.8 68 47.1
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-06 57.0 101 39.6
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-06 57.0 64 50.0
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-06 57.0 101 39.6
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 2.0e-06 57.0 43 60.5


User provided reference genes

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